BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg917694 Length=423 Score E Sequences producing significant alignments: (Bits) Value AT5G59510.1 | Symbols: RTFL5, DVL18 | ROTUNDIFOLIA like 5 | chr... 610 3e-174 > AT5G59510.1 | Symbols: RTFL5, DVL18 | ROTUNDIFOLIA like 5 | chr5:23990074-23990696 FORWARD LENGTH=623 Length=623 Score = 610 bits (330), Expect = 3e-174 Identities = 395/426 (93%), Gaps = 5/426 (1%) Strand=Plus/Plus Query 1 ATGGATGATGAAAAGTTGTGGAAAGTT-TCCAAGAAAGATTCCATCTTCGAAACGACTCA 59 |||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||| Sbjct 16 ATGGATGATGAAAATTTGTGGAAAGTTGT-GAAGAAAGATTCCATCTTCGAAACGACTCA 74 Query 60 TTTCTCTTCAAAACCTGTTTTCACACGAAGTTTCTCAAC-TAAAC--CCACTTCTTCTTC 116 ||||||||||||||||||||| |||||||| |||||||| |||| | |||||||||| Sbjct 75 TTTCTCTTCAAAACCTGTTTTTACACGAAGCTTCTCAACAAAAACTTCTTCTTCTTCTTC 134 Query 117 AAAACCCGTTTTCATACGAAGTTTCTCAACTAAACCCACTTCGTATTCTTCATCAGAGCC 176 |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct 135 AAAACCCGTTTTCACAAGAAGTTTCTCAACTAAACCCACTTCGTATTCTTCATCAGAGCC 194 Query 177 CATCTTTAGACGAAGTTTCTCTGCAAAGCCTGCTCCTTCGAAATCTTTGTTTCTGTCTAG 236 |||||||||||| |||||||||||||| || || ||||||||||| |||||| ||||| Sbjct 195 CATCTTTAGACGGAGTTTCTCTGCAAAACCCACTTCTTCGAAATCTCCGTTTCTATCTAG 254 Query 237 AAGCAGTTCCACGAAATGCCAAGCTGATACATCTTCTGCTTCCAAGTGTTCCATCTCTCG 296 |||| ||||||||||||||| | ||||||||||||| |||||||||||||||||||||| Sbjct 255 AAGCGGTTCCACGAAATGCCCTGTTGATACATCTTCTACTTCCAAGTGTTCCATCTCTCG 314 Query 297 GAGCTTGTCACAGAAAGGAGCTTCGGTGACCCGAAAGTGTCGTAATATGGCCAAGGAGCA 356 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 315 GAGCTTGTCTCAGAAAGGAGCTTCGGTGACCCGAAAGTGTCGTAATATGGCCAAGGAACA 374 Query 357 CAAGTCTCGGTTTTACATCATGAAACGCTGCGTTTTGATGCTCGTTTGTTGGCACAAACA 416 ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| Sbjct 375 CAAGTCTCGGTTTTACATCATGAAACGTTGCGTTCTGATGCTCGTTTGTTGGCACAAACA 434 Query 417 TGCCTG 422 |||||| Sbjct 435 TGCCTG 440 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 20056831851 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5