BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg917747
Length=2661
Score E
Sequences producing significant alignments: (Bits) Value
AT5G60010.1 | Symbols: | ferric reductase-like transmembrane c... 4327 0.0
AT3G45810.1 | Symbols: | ferric reductase-like transmembrane c... 1592 0.0
> AT5G60010.1 | Symbols: | ferric reductase-like transmembrane
component family protein | chr5:24160456-24164755 FORWARD LENGTH=2661
Length=2661
Score = 4327 bits (2343), Expect = 0.0
Identities = 2555/2661 (96%), Gaps = 0/2661 (0%)
Strand=Plus/Plus
Query 1 ATGAAAAATAACATTCCTACCGAGGATTCGACAAAATGGATGTTAGAGAGTGTAGAGATC 60
||||||| ||||| |||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct 1 ATGAAAAGTAACACTCCTACGGAGGATTCAACAAAATGGATGTTAGAGAGTGTAGAGATC 60
Query 61 GATTCAATGGGTGAAGGTTCGTCCAAAGAACCCGAAATTAACCTCAACAAGAATGAAGGT 120
||||||||||||||| | || || ||||||||||||||||||||||||||||| ||||||
Sbjct 61 GATTCAATGGGTGAAAGCTCCTCAAAAGAACCCGAAATTAACCTCAACAAGAACGAAGGT 120
Query 121 GGTCTGAAGAAGAATGCGTCAAGAAATCTCGGCGTGGGATCGATAATCCGAACGTTAAGC 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||
Sbjct 121 GGTCTGAAGAAGAACGCGTCAAGAAATCTCGGCGTGGGATCGATAATCCGAACATTGAGC 180
Query 181 GTTTCAAACTGGAGAAAGAGCGGGAATCTAGGCTCTCCGAGCACAAGGAAAAGTGGGAAC 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 181 GTTTCAAACTGGAGAAAGAGCGGGAATCTAGGCTCTCCGAGCACAAGGAAAAGTGGAAAC 240
Query 241 CTGGGGCCTCCGACCAATGCCGTGCCCAAGAAGACAGGTCCACAAAGAGTGGAGAGGACA 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 CTGGGGCCTCCGACCAATGCCGTGCCCAAGAAGACAGGTCCACAAAGAGTGGAGAGGACA 300
Query 301 ACATCTAGCGCCGCTAGGGGACTTCAGAGCTTACGGTTCCTTGATCGGACAGTCACCGGA 360
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 ACATCAAGCGCGGCTAGGGGACTTCAGAGCTTACGGTTCCTTGATCGGACAGTCACCGGA 360
Query 361 CGAGAACGAGATGCATGGAGGTCGATTGAGAATCGATTTAATCAGTTTTCTGTCGATGGC 420
|||||||||||||||||||| ||||||||||| || || |||||||| ||||| ||||||
Sbjct 361 CGAGAACGAGATGCATGGAGATCGATTGAGAACCGGTTCAATCAGTTCTCTGTTGATGGC 420
Query 421 AAATTGCCTAAAGAGAAATTCGGCGTCTGCATTGGAATGGGAGACACGATGGAGTTTGCT 480
|| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 421 AAGTTGCCTAAAGAGAAATTCGGCGTCTGCATTGGAATGGGAGACACAATGGAGTTTGCG 480
Query 481 GCAGAAGTTTATGAGGCATTGGGTCGGAGAAGACAAATAGAGACAGAAAACGGTATCGAC 540
|||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||
Sbjct 481 GCAGAAGTTTATGAAGCATTGGGTCGGAGGAGACAAATAGAGACAGAAAACGGTATTGAC 540
Query 541 AAAGAACAACTCAAGGTGTTTTGGGAAGACATGATCAAGAAAGACCTCGATTGTCGTCTT 600
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 AAAGAACAACTCAAGCTGTTTTGGGAAGACATGATCAAGAAAGACCTCGATTGTCGTCTT 600
Query 601 CAGATCTTTTTCGACATGTGTGACAAGAACGGAGATGGTAAGCTCACAGAAGAGGAAGTG 660
|||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||||
Sbjct 601 CAGATCTTCTTCGACATGTGTGACAAAAACGGAGATGGTAAGCTGACGGAAGAGGAAGTG 660
Query 661 AAAGAGGTCATAGTCTTGAGCGCCTCCGCGAACCGCCTAGGGAATTTGAAAAAGAACGCT 720
|||||||||||||| ||||| ||||| ||||||||||| |||||||| |||||||| |||
Sbjct 661 AAAGAGGTCATAGTATTGAGTGCCTCGGCGAACCGCCTCGGGAATTTAAAAAAGAATGCT 720
Query 721 GCGGCTTACGCGTCTTTGATCATGGAAGAACTCGACCCCGATCACAAAGGATACATAGAG 780
|| |||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct 721 GCAGCTTACGCATCTTTGATCATGGAAGAACTCGACCCTGATCATAAAGGATACATAGAG 780
Query 781 ATGTGGCAGTTAGAGATACTATTAACAGGAATGGTGACAAACGCTGATACAGAGAAGATG 840
|||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||
Sbjct 781 ATGTGGCAGTTAGAAATACTACTAACAGGAATGGTGACAAACGCTGATACGGAGAAGATG 840
Query 841 AAGAAATCTCAAACGCTGACACGCGCAATGATCCCAGAGCGTTACAGAACGCCGATGAGC 900
|||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct 841 AAGAAATCGCAAACGCTGACACGCGCGATGATCCCAGAGCGGTACAGAACGCCGATGAGC 900
Query 901 AAATACGTTTCAGTAACCGCAGAACTGATGCACGAGAATTGGAAAAAATTATGGGTACTC 960
|| ||||| || |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 901 AAGTACGTCTCCGTAACCGCGGAACTGATGCACGAGAATTGGAAAAAATTATGGGTACTC 960
Query 961 GCTTTGTGGGCCATCATCAACGTTTATCTATTCATGTGGAAGTACGAAGAGTTTATGAGA 1020
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 961 GCTTTGTGGGCCATCATCAACGTCTATCTATTCATGTGGAAGTACGAAGAGTTCATGAGA 1020
Query 1021 AACCCTCTCTACAACATCACCGGACGCTGCGTTTGCGCAGCTAAAGGTGCGGCCGAAACG 1080
|||||||||||||||||||||||||||||||||||||| |||||||| || || ||||||
Sbjct 1021 AACCCTCTCTACAACATCACCGGACGCTGCGTTTGCGCCGCTAAAGGCGCTGCTGAAACG 1080
Query 1081 CTGAAACTCAACATGGCTCTGATTTTGGTCCCGGTCTGTAGAAAAACCCTAACGATCCTT 1140
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct 1081 CTGAAACTCAACATGGCTCTGATTTTGGTCCCAGTCTGTAGAAAAACCCTAACGATACTT 1140
Query 1141 AGGTCAACGTTTTTGAACCGTGTGGTCCCATTCGACGACAACATAAACTTCCACAAGGTG 1200
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1141 AGGTCAACGTTCTTGAACCGTGTGGTCCCATTCGACGACAACATAAACTTCCACAAGGTG 1200
Query 1201 ATTGCGTATATGATCGCGTTCCAGTCTTTGCTTCACACGGCACTTCACATCTTCTGTAAC 1260
||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct 1201 ATTGCATATATGATCGCGTTCCAGGCTTTGCTCCACACGGCACTTCACATCTTCTGTAAC 1260
Query 1261 TACCCTAGGTTAAGCTCGTGCTCTTACGACGTGTTCTTGACGTACGCGGGAGCTGCCTTG 1320
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1261 TACCCTAGGTTAAGCTCGTGCTCTTACGACGTGTTCTTGACGTACGCGGGTGCTGCCTTG 1320
Query 1321 GGAAACACGCAACCGAGTTACCTAGGTTTAATGATGACGTCAGTGTCGATCACGGGAGTT 1380
||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||
Sbjct 1321 GGAAATACGCAACCGAGTTACCTAGGTTTAATGTTGACGTCAGTGTCGATCACGGGTGTT 1380
Query 1381 TTAATGATATTCTTCATGGGATTCTCGTTTACACTGGCCATGCATTATTTTAGAAGGAAC 1440
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1381 TTAATGATTTTCTTCATGGGATTCTCGTTTACACTGGCGATGCATTATTTTAGAAGGAAC 1440
Query 1441 ATAGTGAAATTGCCTAAACCGTTTAACGTTCTTGCTGGGTTTAATGCGTTTTGGTATGCT 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1441 ATAGTGAAATTGCCTAAACCGTTTAACGTTCTTGCTGGGTTTAATGCGTTTTGGTATGCT 1500
Query 1501 CATCATTTGTTGGTTCTTGCTTATATTCTTCTCATCATCCATGGTTACTATCTTATCATC 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1501 CATCATTTGTTGGTTCTTGCTTATATTCTTCTCATCATCCATGGTTACTATCTTATCATC 1560
Query 1561 GAGAAGCCTTGGTACCAGAAGACGACATGGATGTATTTGGCCGTGCCGATGCTGTTCTAC 1620
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1561 GAGAAGCCTTGGTACCAGAAGACGACATGGATGTATTTGGCCGTGCCGATGTTGTTCTAC 1620
Query 1621 GCGAGTGAGAGGCTATTCTCACGTCTCCTTCAAGAACACAGCCATCGTGTCAACGTTATT 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1621 GCGAGTGAGAGGCTATTCTCACGTCTCCTTCAAGAACACAGCCATCGTGTCAACGTTATT 1680
Query 1681 AAGGCTATTGTATATTCGGGCAACGTTCTTGCACTTTACGTAACCAAACCTCCTGGATTC 1740
|||||||||||||||||||| ||||||||||||||||| || || |||||||| ||||||
Sbjct 1681 AAGGCTATTGTATATTCGGGGAACGTTCTTGCACTTTATGTTACAAAACCTCCCGGATTC 1740
Query 1741 AAATACAAAAGTGGCATGTACATGTTTGTCAAGTGTCCTGATCTCTCAAAATTTGAATGG 1800
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1741 AAATACAAAAGTGGCATGTACATGTTTGTCAAGTGTCCAGATCTCTCAAAATTTGAATGG 1800
Query 1801 CATCCGTTCTCAATCACTTCTGCACCAGGAGATGATTATTTAAGTGTTCACATTAGAGCC 1860
||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1801 CATCCATTCTCCATCACTTCTGCACCAGGAGATGACTATTTAAGTGTTCACATTAGAGCC 1860
Query 1861 TTGGGAGATTGGACCACTGAACTTAGGAGCAGATTCGCAAAGACATGCGAGCCTCCTCAA 1920
|| |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct 1861 TTAGGAGATTGGACCACTGAACTTAGGAGCAGATTTGCAAAGACATGCGAGCCTACTCAA 1920
Query 1921 GCAGCCGCAAAACCTAAACCAAACAGTCTTATGAGGATGGAAACAAGAGCTGCGGGTGTG 1980
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1921 GCAGCCGCTAAACCTAAACCAAACAGTCTTATGAGGATGGAAACAAGAGCTGCGGGTGTG 1980
Query 1981 AATCCTCACATTGAAGAATCACAAGTCTTATTCCCAAAAATATTCATCAAAGGACCTTAT 2040
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct 1981 AATCCTCACATTGAAGAATCACAAGTCTTGTTCCCAAAAATATTCATCAAAGGACCGTAT 2040
Query 2041 GGAGCTCCGGCACAAAATTATCAGAAGTTCGATATCCTCTTACTAGTTGGACTAGGGATA 2100
|||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 2041 GGAGCTCCGGCACAAAATTATCAGAAGTTCGACATCCTCTTACTAGTTGGGCTAGGGATT 2100
Query 2101 GGGGCAACTCCATTCATAAGCATTTTGAAAGACATGTTAAACCATCTAAAACCTGGGATT 2160
||||||||||||||||||||||||||||| ||||||||||||||||| ||||| || |||
Sbjct 2101 GGGGCAACTCCATTCATAAGCATTTTGAAGGACATGTTAAACCATCTGAAACCCGGAATT 2160
Query 2161 CCCAGAAGTGGGCAAAAGTACGAAGGAAGTGTAGGAGGAGAGAGTATAGGAGGTGATAGT 2220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2161 CCCAGAAGTGGGCAAAAGTACGAAGGAAGTGTAGGAGGAGAGAGTATAGGAGGTGATAGT 2220
Query 2221 GTTAGTGGCGGAGGAGGAAAGAAGTTTCCGCAAAGAGCATAttttttttGGGTGACAAGA 2280
|||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2221 GTTAGTGGTGGAGGAGGCAAGAAGTTTCCTCAAAGAGCATATTTTTTTTGGGTGACAAGA 2280
Query 2281 GAACAAGCTTCCTTTGATTGGTTCAAGGGAGTTATGGATGACATCGCCGAGTATGATAAA 2340
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2281 GAACAAGCTTCCTTTGATTGGTTCAAGGGAGTTATGGATGACATCGCAGAGTATGATAAA 2340
Query 2341 ACCCATGTGATAGAAATGCATAACTACTTAACAAGCATGTACGAAGCGGGAGATGCAAGA 2400
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2341 ACCCATGTAATAGAAATGCATAACTACTTAACAAGCATGTACGAAGCTGGAGATGCAAGA 2400
Query 2401 TCTGCCCTAATCGCCATGGTTCAGAAACTTCAACATGCCAAGAACGGTGTTGATATTGTC 2460
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2401 TCTGCCCTTATCGCCATGGTTCAGAAACTTCAACATGCCAAGAACGGTGTTGATATTGTC 2460
Query 2461 TCCGAAAGCCGGATACGAACACATTTCGCAAGACCTAATTGGAGGAAGGTTTTTTCTGAG 2520
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2461 TCCGAAAGCCGGATACGAACACATTTTGCAAGACCTAATTGGAGGAAGGTTTTTTCTGAA 2520
Query 2521 TTATCAAGCAAACACGAAGCTTGTCGAATAGGTGTATTCTACTGTGGAAGTCCAACACTG 2580
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2521 TTGTCAAGCAAACACGAAGCTTGTCGAATAGGTGTATTCTACTGTGGAAGTCCAACACTG 2580
Query 2581 GTTCGACCACTTAAAGAACTTTGTCAGGAGTTTAGTCTCGAGTCTTCCACTCGTTTTACT 2640
|||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct 2581 GTTCGACCACTTAAAGAACTCTGTCAGGAGTTTAGTCTCGAGTCATCCACTCGTTTTACT 2640
Query 2641 TTCCACAAGGAAAACTTTTAA 2661
|||||||||||||| ||||||
Sbjct 2641 TTCCACAAGGAAAATTTTTAA 2661
> AT3G45810.1 | Symbols: | ferric reductase-like transmembrane
component family protein | chr3:16832883-16837569 REVERSE LENGTH=2739
Length=2739
Score = 1592 bits (862), Expect = 0.0
Identities = 1737/2151 (81%), Gaps = 94/2151 (4%)
Strand=Plus/Plus
Query 129 GAAGAATGCGTC-AAGAAATCTCGGCGTGGGATCGATAATCCGAACGTTAAGCGT-TTCA 186
|||||||| ||| ||| ||||||| ||||||||| |||||| | | | ||||| ||
Sbjct 156 GAAGAATGTGTCTAAG-AATCTCGCCGTGGGATCAATAATCAGGTCCATGAGCGTAAACA 214
Query 187 AACTGGAGAAAGAGCGGGAATCTAGGCTCTCCGAGCACAAGGAAAAGTGGGAACCTGGGG 246
|| |||||||||||||| ||||| || || |||||||| ||||| ||||| |||||||||
Sbjct 215 AA-TGGAGAAAGAGCGGTAATCTCGGGTCCCCGAGCACGAGGAAGAGTGGAAACCTGGGG 273
Query 247 CCTCCGACCAATGCC-GTG-CCCAAG----AAGA-CAGGTCCACAAAGAGTGGAGAGGAC 299
||||| | | | || ||| |||||| |||| | || ||||||||||| ||||||||
Sbjct 274 CCTCC-A-C--TCCCTGTGTCCCAAGTAAAAAGACCGGGGCCACAAAGAGTCGAGAGGAC 329
Query 300 AACATCTAGCGCCGCTAGGGGACTTCAGAGCT-TACGGTTCCTTGATCGGACAGTCACCG 358
||||||||||| ||||| ||||| || || | | ||||||||||||||||| ||||| |
Sbjct 330 TACATCTAGCGCGGCTAGAGGACTACAAAG-TCTCCGGTTCCTTGATCGGACCGTCACGG 388
Query 359 GACGAGAACGAGATGCATGGAGGTCGATTGAGAATCGATTTAATCAGTTTTCTGTCGATG 418
|| ||||||||||| | ||||| || || || || || || ||||| ||| |||| || |
Sbjct 389 GAAGAGAACGAGATTCGTGGAGATCAATCGAAAACCGGTTCAATCAATTTGCTGTTGACG 448
Query 419 GCA-AATTGCCTAAAGAGAAATTCGGCGTCTGCATTGGAATGGGAGACACGA-TGGAGTT 476
| | || || || || ||||||||||| ||||||||||||||||| || | |||||||
Sbjct 449 GGAGGCTT-CCCAAGGATAAATTCGGCGTTTGCATTGGAATGGGAGATAC-ATTGGAGTT 506
Query 477 TGCTGCAGAAGTTTATGAGGCATTGGGTCGGAGAAGACAAATAGAGACAGAAAACGGTAT 536
||| ||| |||| || || ||||||||| |||||||||||||| | |||||||| || ||
Sbjct 507 TGCGGCAAAAGTATACGAAGCATTGGGTAGGAGAAGACAAATAAAAACAGAAAATGGGAT 566
Query 537 CGACAAAGAACAACTCAAGGTGTTTTGGGAAGACATGATCAAGAAAGACCTCGATTGTCG 596
||||| |||||||||||| | ||||||||||||||||||||||| || ||||| |||||
Sbjct 567 TGACAAGGAACAACTCAAGCTTTTTTGGGAAGACATGATCAAGAAGGATCTCGACTGTCG 626
Query 597 TCTTCAGATCTTTTTCGACATGTGTGACAAGAACGGAGATGGTAAGCTCACAGAAGAGGA 656
|| || ||||| |||||||||||||| ||| ||||||| || ||| | |||||||||||
Sbjct 627 CCTCCAAATCTTCTTCGACATGTGTGATAAGGACGGAGACGGGAAGTTAACAGAAGAGGA 686
Query 657 AGTGAAAGAGGTCATAGTCTTGAGCGCCTCCGCGAACCGCCTAGGGAATTTGAAAAAGAA 716
|| ||||| ||||||||||| || || ||||||||| | || | |||| |||| |||||
Sbjct 687 GGTTAAAGAAGTCATAGTCTTAAGTGCATCCGCGAACAGGCTCGTGAATCTGAAGAAGAA 746
Query 717 CGCTGCGGCTTACGCGTCTTTGATCATGGAAGAACTCGACCCCGATCA-CAAAGGATACA 775
|||||| |||| || ||||||||||||||||| ||||||||| || | | | || ||||
Sbjct 747 TGCTGCGTCTTATGCTTCTTTGATCATGGAAGAGCTCGACCCCAATGAGC-AGGGTTACA 805
Query 776 TAGAGATGTGGCAGTTAGAGATACTATTAACAGGAATGGTGA-CAAACGCTGA-TACAGA 833
| ||||||||||| | ||| | ||| |||||||||| || | ||||||| || | || |
Sbjct 806 TTGAGATGTGGCAACTCGAGGTGCTACTAACAGGAATTGT-ATCAAACGCCGACT-CACA 863
Query 834 GAA-G--ATGAAGAAATCTCAAAC-GCTGACACGCGCAATGATCCCAGAGCGTTACAGAA 889
|| | ||| |||||| | ||| ||| || || || ||||||||| | ||||||||||
Sbjct 864 TAAGGTCGTGAGGAAATCGC-AACAGCTAACGCGAGCCATGATCCCAAAACGTTACAGAA 922
Query 890 CGCCGA-TGAGCAAATACGTT-TCAGTAACCGCAGAACTGATGCACGAGAATTGGAA-AA 946
| |||| | || ||||||||| | ||| |||||||| || ||| ||||| | ||||| ||
Sbjct 923 CACCGACT-AGTAAATACGTTGT-AGTGACCGCAGAGCTAATGTACGAGCACTGGAAGAA 980
Query 947 AATTATGGGTAC-TCGCTTTGTGGGC-CATCA-TCAACGTTTAT-CTATTCATGTGGAAG 1002
||| ||||| | || | |||| ||| | || | |||| | | || |||||||||||
Sbjct 981 GATT-TGGGT-CGTCACATTGT-GGCTC-GCAGTAAACG-TCGTCCTCTTCATGTGGAAA 1035
Query 1003 TACGAAGAGTTTATGAGAAACCCTCTCTACAACATCACCGGACGCTGCGTTTGCGCAGCT 1062
||||||||||| | | || |||||| ||||||||||| ||||||||| ||||||| |||
Sbjct 1036 TACGAAGAGTTCACCACAAGCCCTCTTTACAACATCACTGGACGCTGCCTTTGCGCCGCT 1095
Query 1063 AAAGGTGCGGCCGAAACGCTGAAACTCAACATGGCTCTGATTTTGGTCCCGGTCTGT-AG 1121
||||| |||| |||| || ||||||||||||||| ||||||||||||| || | | ||
Sbjct 1096 AAAGGAACGGCAGAAATACTAAAACTCAACATGGCTTTGATTTTGGTCCCTGT-TTTAAG 1154
Query 1122 AAAAACCCTAACGATCCTTAGGTCAACGTTT-TTGAACC-GTGTGGTCCCATTCGACGAC 1179
|| |||||||||| |||| || || || ||| ||||||| | || |||||||||||||
Sbjct 1155 AAGAACCCTAACGTTCCTCAGATCGAC-TTTCTTGAACCACT-TGATCCCATTCGACGAT 1212
Query 1180 AACATAAACTTCCACAAGGTGATTG-CGTATATGATCGC-GTTCCA-GTCTTTGCTTCAC 1236
||||| |||||||| ||| |||| | ||| ||| || ||| | || |||||||||
Sbjct 1213 AACATCAACTTCCATAAGTTGATAGCCGT-GGCGATAGCAGTT--ATTTCCTTGCTTCAC 1269
Query 1237 ACGGCACTT-CACAT-CTTCTGTAACTACCCTAGGTTAAGCTCGTGCTCTTACGACGTGT 1294
|||||| || ||||| | | || |||||||||||| |||| || ||| | ||| | | |
Sbjct 1270 ACGGCA-TTACACATGC-TATGCAACTACCCTAGGCTAAGTTCTTGCCCCTACAATTTCT 1327
Query 1295 TCT-TGACGTACGC-GGG-AGCTGCCTTGGGAAACACGCAACCGAGTTACCTAGGTTTAA 1351
|| ||| || || ||| | || ||||||| || |||||||| || |||| |||
Sbjct 1328 ACTCCGAC-TATGCGGGGAATCT--CTTGGGAGCCAAGCAACCGACCTATTTAGGCCTAA 1384
Query 1352 TGATGACGTCAGTGTCGATCACGGGAGTTTTAATGAT-ATTCTTCATGGGAT-TCTCGTT 1409
|| |||| | || ||| |||| |||||| ||||||| | |||||||||| | |||| ||
Sbjct 1385 TGCTGACCCCGGTTTCGGTCACAGGAGTTCTAATGATCA-TCTTCATGGG-TATCTCATT 1442
Query 1410 TACACTGGCCATGCATTATTTTAGAAGGAACATAGTGAAATTGCCTAAACCGTTTAA-CG 1468
|| || || |||||||| || ||||| ||||||||||||||||||| ||| ||||| ||
Sbjct 1443 CACCCTTGCTATGCATTACTTCAGAAGAAACATAGTGAAATTGCCTATACCATTTAACCG 1502
Query 1469 TTCTTGCTGGGTTTAATGCGTTTTGGTATGCTCATCATTTGTTGGTTCTTGCTTATATTC 1528
||||||||| |||||| ||||||||||||||||||||||| ||||| |||| || ||
Sbjct 1503 -TCTTGCTGGATTTAATTCGTTTTGGTATGCTCATCATTTGCTGGTTATTGCCTACGCTC 1561
Query 1529 TTCTCATCATCCATGGTTACTA-TCTTATCATCGAGAAGCCTTGGTACCAGAAGACGACA 1587
|||| ||||||||||||||| | ||||||||||||||| ||||||||||| ||||||||
Sbjct 1562 TTCTTATCATCCATGGTTAC-ATTCTTATCATCGAGAAACCTTGGTACCAAAAGACGACG 1620
Query 1588 TGGATGTATTTGGCCGTGCCGATGCTGTTCTACGCGAGTGAGAGGCTATTCTCACGTCTC 1647
|||||||| ||||| | || ||| |||| |||||||| |||||||| ||||||||
Sbjct 1621 TGGATGTACGTGGCCATACCAATGGTGTTGTACGCGAGCGAGAGGCTTTTCTCACG---A 1677
Query 1648 CTTCAAGAACACAGCCATCGTGTCAACGTTATTAAGGCTATTGTATATTCGGGCAACGTT 1707
|||||||||||| |||||||||| || |||| || |||||||||||||| ||||| |||
Sbjct 1678 GTTCAAGAACACAACCATCGTGTCCACATTATCAAAGCTATTGTATATTCAGGCAATGTT 1737
Query 1708 CTTGCACTTTACGTAACCAAACCTCCTGGATTCAAATACAAAAGTGGCATGTACATGTTT 1767
|||||||| || | |||||||||| || ||||| ||||||||||||||||||||||||
Sbjct 1738 CTTGCACTCTATATGACCAAACCTCAAGGGTTCAAGTACAAAAGTGGCATGTACATGTTT 1797
Query 1768 GTCAAGTGTCCTGATCTCTCAAAATTTGAATGGCATCCGTTCTCAATCACTTCTGCACCA 1827
|||||||| |||||| |||| ||||| ||||||||||| ||||| ||||||||||||||
Sbjct 1798 GTCAAGTGCCCTGATATCTCCAAATTCGAATGGCATCCATTCTCCATCACTTCTGCACCC 1857
Query 1828 GGAGATGATTATTTAAGTGTTCACATTAGAGCCTTGGGAGATTGGACCACTGAACTTAGG 1887
|||||||| ||||| || |||||||| ||||| || ||||||||||| |||||||||||
Sbjct 1858 GGAGATGAATATTTGAGCGTTCACATAAGAGCATTAGGAGATTGGACTTCTGAACTTAGG 1917
Query 1888 AGCAGATTCGCAAAGACATGCGAGCCTCCTCAAGCAGCCGCAAAACCTAAACCAAAC-AG 1946
| |||||| ||| ||||||| ||||||| |||| | | | ||| |||| ||||| |
Sbjct 1918 AACAGATTTGCAGAGACATGTGAGCCTCATCAAAAATC-G-AAA-CCTAGTCCAAATGA- 1973
Query 1947 TCTTATGAGGATGGAAACAAGAGCTGCG-GGTGTGAATCCTCACATTGAAGAATCACAAG 2005
|||||| ||||||||||||||||| | | |||| |||||||| |||||||||| ||||
Sbjct 1974 TCTTATTAGGATGGAAACAAGAGC-GAGAGGTGCAAATCCTCATGTTGAAGAATCCCAAG 2032
Query 2006 TCTTATTCCCAAAAATATTCATCAAAGGACCTTATGGAGCTCCGGCACAAAATTATCAGA 2065
|||||| |||| |||||| ||||||||||| ||||| ||||||||||||| |||||||
Sbjct 2033 CCTTATTTCCAAGAATATTTATCAAAGGACCATATGGGGCTCCGGCACAAAGCTATCAGA 2092
Query 2066 AGTTCGATATCCTCTTACT-AGTTGGACTAGGGATAGGGGCAACTCCATTCATAAGCATT 2124
|||| |||||||| || | | |||| |||||||| |||||||| ||||| ||||| ||
Sbjct 2093 AGTTTGATATCCTTTTGTTGA-TTGGGCTAGGGATCGGGGCAACCCCATTTATAAGTATC 2151
Query 2125 TTGAAAGACATGTTAAACCATCTAAAACCTGGGATTCCCAGAAGTGGGCAAAAGTACGAA 2184
| ||||| ||||| || |||| |||||||| ||||| | || ||||||||||| |||
Sbjct 2152 CTAAAAGATATGTTGAATAATCTCAAACCTGGTATTCCAAAAACCGGGCAAAAGTATGAA 2211
Query 2185 GGAAGTGTAGGAGGAGAGAG-TATAGGAGG-TGATAGTGT-TAGTGGCGGA 2232
|||||||||||||| ||||| | ||||||| | | ||||| || ||| |||
Sbjct 2212 GGAAGTGTAGGAGGTGAGAGCT-TAGGAGGATCA-AGTGTATA-TGGAGGA 2259
Score = 503 bits (272), Expect = 4e-141
Identities = 407/471 (86%), Gaps = 13/471 (3%)
Strand=Plus/Plus
Query 2194 GGAGGA-G-AGAGTATA-GGAGGTGATAGTGTTAGTGGCGGAGGAGGAAAG-AAGTTTCC 2249
|||||| | || ||| | ||||| | |||||| ||| |||||||| || ||||||||
Sbjct 2272 GGAGGAGGTAGTGTAAATGGAGGAGGTAGTGTAAGT---GGAGGAGG-TAGAAAGTTTCC 2327
Query 2250 GCAAAGAGCATAttttttttGGGTGACAAGAGAACAAGCTTCCTTT-GATTGGTTCAAGG 2308
|||||||||||||||| ||||||||||||||||||||||| |||| || |||||||| |
Sbjct 2328 ACAAAGAGCATATTTTTATTGGGTGACAAGAGAACAAGCTT-CTTTCGAATGGTTCAAAG 2386
Query 2309 GAGTTATGGATGACATCGCCGAGTATGATAAAACCCATGTGATAGAAATGCATAACTACT 2368
||||||||||||| || || | |||||| |||||| |||||||||| |||||||||||||
Sbjct 2387 GAGTTATGGATGATATTGCAGTGTATGACAAAACCAATGTGATAGAGATGCATAACTACT 2446
Query 2369 TAACAAGCATGTACGAAGCGGGAGATGCAAGATCTGCCCTAATCGCCATGGTTCAGAAAC 2428
||||||| ||||||||||| |||||||| |||||||| ||||| || ||||| |||||||
Sbjct 2447 TAACAAGTATGTACGAAGCAGGAGATGCGAGATCTGCTCTAATTGCTATGGTCCAGAAAC 2506
Query 2429 TTCAACATGCCAAGAACGGTGTTGATATTGTCTCCGAAAGCCGGATACGAACACATTTCG 2488
||||||||||||| || |||||||| ||||| ||||| ||||| |||||||| |||||||
Sbjct 2507 TTCAACATGCCAAAAATGGTGTTGACATTGTTTCCGAGAGCCGAATACGAACCCATTTCG 2566
Query 2489 CAAGACCTAATTGGAGGAAGGTTTTTTCTGAGTTATCAAGCAAACACGA-AGCTTGTCGA 2547
||||||||||||||||||||||||||||||| || |||| ||| ||||| | ||| |||
Sbjct 2567 CAAGACCTAATTGGAGGAAGGTTTTTTCTGAATTGTCAAACAAGCACGAGA-CTTCTCGC 2625
Query 2548 ATAGGTGTATTCTACTGTGGAAGTCCAACACTGGTTCGACCACTTAAAGAACTTTGTCAG 2607
|||||||| |||||||||||||||||||| || |||||||| || ||| ||||||||||
Sbjct 2626 ATAGGTGTGTTCTACTGTGGAAGTCCAACGCTTGTTCGACCGCTAAAATCACTTTGTCAG 2685
Query 2608 GAGTTTAGTCTCGAGTCTTCCACTCGTTTTACTTTCCACAAGGAAAACTTT 2658
||||| ||||||||||| ||||| || |||||||| ||||| || || |||
Sbjct 2686 GAGTTCAGTCTCGAGTCGTCCACCCGCTTTACTTTTCACAAAGAGAA-TTT 2735
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 132139727862
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5