BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg918145 Length=2166 Score E Sequences producing significant alignments: (Bits) Value AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosp... 3382 0.0 AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosp... 1373 0.0 AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicas... 1282 0.0 > AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:25472598-25476511 REVERSE LENGTH=2476 Length=2476 Score = 3382 bits (1831), Expect = 0.0 Identities = 2063/2172 (95%), Gaps = 27/2172 (1%) Strand=Plus/Plus Query 1 ATGCCTTTGAAGTTCCTTCTCCGAATACGATTCTTCACTCACTCTCTTCCGGGTACTCAT 60 ||||||||||| |||| ||||||||||||||||||| ||||||||||| ||||||| ||| Sbjct 326 ATGCCTTTGAATTTCCCTCTCCGAATACGATTCTTCGCTCACTCTCTTTCGGGTACACAT 385 Query 61 CTCTCTTATAATCCCTCTAGCTCCGTCCCTTTGCTCTTCCGGATATTCTCTTCTAGG-TT 119 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| || || Sbjct 386 CTCTCTTATAATACCTCTAGCTCCGTCCCTTTGCTCTTCCGGATATTCTCTTCT-GGATT 444 Query 120 GAATCACTTTGAATTCGGGTCTCGCATCAACTTCTCAACCCGTCCGAACAGAGACCAACC 179 ||||||||||||||| ||||||||||| ||||||||||||||||| |||||||| ||||| Sbjct 445 GAATCACTTTGAATTTGGGTCTCGCATAAACTTCTCAACCCGTCCTAACAGAGATCAACC 504 Query 180 CGAATTTGAGCGGCGGATTCGAGATGGAGGAGAAATTCGCGCGTCAAAGAGCTTGATCGA 239 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 505 AGAATTTGAGCGGCGGATTCGAGACGGAGGAGAAATTCGCGCGTCAAAGAGCTTGATCGA 564 Query 240 AGACGAAGAAGAGCTCAGCAATTGGGTAAGCGGTTTTAGAACCGGATCTTCGCGTGGACG 299 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 565 AGACGAGGAAGAGCTCAGCAATTGGGTAAGCGGTTTTAGAACCGGATCTTCGCGTGGAAT 624 Query 300 TCTCACGAGTGAAGATGAAGATGCGGGTCCAAACGTGGAGGATCGTAGCAGAGGAAGAAT 359 ||||| |||||| ||||||||| | | ||||||||||||||||||||||| Sbjct 625 TCTCAAGAGTGACGATGAAGAT----G-----A---GGAGGATCGTAGCAGAGGAAGAAA 672 Query 360 TCAAGAGAAGAGAGGAATTCGCAACCAAGTTGATTCTTTTAGGGATAAGCGTTATGATGG 419 ||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||| Sbjct 673 CCAAGAGAAGAGAGGAATTCGCAACCAAGTTGATTCCTTTAGGAATAAGCGTTATGGTGG 732 Query 420 TGATAGAGAAAGGGGATTCAATAGTCGGATTCAGGGAAAGAGTAGTC-AAGCTTC-TTTT 477 ||||||||||||||||||||||||||||||||| ||||||||||| | | || || ||| Sbjct 733 TGATAGAGAAAGGGGATTCAATAGTCGGATTCAAGGAAAGAGTAG-CGAGGCGTCATTTC 791 Query 478 GATGGGAGGAAAGACACAAGTTTTAGGAGAGATAGAGATAAAGAAGACTACAAGGGTTTA 537 | |||||||||||| ||||| ||| || |||||||| ||||||| | ||||||||| Sbjct 792 G-TGGGAGGAAAGAGACAAGCTTT-----AG-TAGAGATAGAGAAGACGAGAAGGGTTTA 844 Query 538 AGGAAACGGGAAGAT-AT--TCTTGAAGACGAAAGTAGTGATGAGGATGTGAAGAGTTTA 594 ||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||| Sbjct 845 AGGAAACGGGAAGATCTTCGTCTTGAAGACGAAAGTAGTGATGAGGATGTCAAGAGTTTA 904 Query 595 GTAATGGGAGGTATTGGGGATTTGCTTAGTGAAGATGATGAGGAAGAGGACCAAGATTAT 654 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 905 GTAATGGGAGATATTGGGGATTTGCTTAGTGAAGATGATGAGGAAGAGGACCAAGATTAT 964 Query 655 GAATTTCTTAAGAAGAAAGCGGTTTCTGCTTTTGGGTTTGATAAGGAGAAGGTTACAGAA 714 || ||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||| Sbjct 965 GACTTTCTTAAGAAGAAAGCTGTTTCTGCTTTTGGGTTTGATAAGGAGAATGTTATAGAA 1024 Query 715 GCGGATAAGGCAAGGAATGCGAATGATTCTTATTTGACTAAGACAAGATTTGATCAGTAT 774 |||||||| | |||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct 1025 GCGGATAAAACGAGGAATGCAAATGATTCTTATTTGACTAAGACAAGATTTGATCACTAT 1084 Query 775 CCATTGTCTCCCTTATCGCTAAAAGCCATCAAGGATGCTGGATACGAGACAATGACTGTT 834 ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct 1085 CCATTGTCTCCCTTATCGCTAAAGGCAATCAAGGATGCTGGATACGAGACAATGACTGTT 1144 Query 835 GTGCAGGAAGCTACTCTCCCTATAATTCTCAAAGGTAAAGATGTCCTAGCTAAGGCCAAA 894 || |||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct 1145 GTTCAGGAAGCTACTCTCCCTATAATTCTCAAAGGCAAGGATGTCCTAGCTAAGGCCAAA 1204 Query 895 ACAGGAACTGGGAAAACTGTAGCGTTTTTGCTTCCATCAATTGAAGTAGTTGTCAAATCT 954 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1205 ACAGGAACTGGGAAAACTGTAGCGTTTTTGCTTCCATCAATTGAAGTAGTTGTCAAATCT 1264 Query 955 CCTCCTACAAGCCCGGATAATAAGCGACCCCCAATTCTTGCGCTTGTGATATGCCCAACT 1014 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct 1265 CCTCCTACAAGCCCGGATAATAAGCGACCCCCAATCCTTGCGCTTGTGATATGCCCTACT 1324 Query 1015 AGAGAACTTGCCAATCAAGCTGCAACAGAAGCAAACACCTTGCTAAAGTATCATCCATCT 1074 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1325 AGAGAACTTGCCAATCAAGCTGCTACAGAAGCAAACACCTTGCTAAAGTATCATCCATCT 1384 Query 1075 ATTGGTGTTCAAGTTGTGATTGGAGGCACAAGACTTGGTTTAGAGCAAAAGCTTATGCAA 1134 |||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||| Sbjct 1385 ATTGGTGTTCAAGTTGTGATTGGAGGTACGAGACTTGGTTTAGAGCAAAAGCGTATGCAA 1444 Query 1135 ACAAATCCTTGCCAGATTTTAGTGGCTACACCTGGAAGGCTCAAAGACCATATCGAGAAC 1194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1445 ACAAATCCTTGCCAGATTTTAGTGGCTACACCTGGAAGGCTCAAAGACCATATCGAGAAC 1504 Query 1195 ACGCCAGGCTTTGCAACAAGGTTAAAGGGTGTGAAAGTCCTTGTGCTTGATGAAGCTGAT 1254 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1505 ACGCCAGGCTTTGCAACGAGGTTAAAGGGTGTGAAAGTCCTTGTGCTTGATGAAGCTGAT 1564 Query 1255 CATCTTTTAGACATGGGCTTTCGCAAGGACATTGAGAGGATAATTTCCGCTGTTCCTAAG 1314 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1565 CATCTTTTAGATATGGGCTTTCGCAAGGACATTGAGAGGATAATTTCCGCTGTTCCTAAG 1624 Query 1315 GAGAGACAAACTTTTCTATTTTCTGCCACAGTACCTGAAGAGGTTCGCCAAATATGCCTA 1374 ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct 1625 GAGAGACAAACTTTTCTATTTTCCGCCACAGTACCTGAAGAGGTACGCCAAATATGCCTT 1684 Query 1375 GTTGCTCTGAGGCGGGATCACGAGTTTGTCAATTGTGTTCATGAAGGCACTATAGAGACG 1434 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1685 GTTGCTCTAAGGCGGGATCACGAGTTTGTCAATTGTGTTCATGAAGGCACTATAGAGACG 1744 Query 1435 CATCAACAGGTCAGACAAATGCACATGATTGCATCACTAGACAGACATTTCTCTCTTGTG 1494 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || Sbjct 1745 CATCAACAGGTCAGACAAATGCACATGATTGCATCACTGGACAGACATTTCTCTCTTCTG 1804 Query 1495 TACACACTTCTTCGCCAACACATTATGGATAACGTAGACTATAAGGTCATTGTCTTCTGT 1554 ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1805 TACACACTTCTTCGCGAACACATTATGGGTAACGTAGACTATAAGGTCATTGTCTTCTGT 1864 Query 1555 ACAACTGCCATGGTTACAAAATTAGTTGCTGATCTACTAGGTGAGATAAACTTAAATGTG 1614 ||||| |||||||||||||||||||| ||||||||||| |||||| |||||||||| ||| Sbjct 1865 ACAACGGCCATGGTTACAAAATTAGTGGCTGATCTACTTGGTGAGCTAAACTTAAACGTG 1924 Query 1615 AGAGAGATCCATTCTAGAAAACCGCAGAGTTACAGGACGAGGGTTTCTAATGAGTTCCGA 1674 |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct 1925 AGAGAGATCCATTCTAGAAAACCGCAGAGTTACAGGACAAGGGTTTCTAACGAGTTCCGA 1984 Query 1675 AAATCCAAGGGTTTGATTCTGGTAACATCTGATGTATCTGCTCGAGGAGTCGATTACCCT 1734 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct 1985 AAATCCAAGGGTTTGATTCTCGTAACATCTGATGTATCTGCTCGAGGAGTTGATTACCCT 2044 Query 1735 GATGTGACCCTTGTTTTACAGGTGGGATTGCCAAAAGACAGAGAACAATATATACACAGA 1794 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 2045 GATGTGACCCTTGTTTTACAGGTTGGATTGCCAAAAGACAGAGAACAATATATACACAGA 2104 Query 1795 CTTGGTAGAACGGGGAGAAAAGGAAAGGAAGGAGAAGGCCTATTGTTGTTGGCACCATGG 1854 ||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct 2105 CTTGGTAGAACCGGGCGAAAAGGAAAGGAAGGAGAAGGCATATTGTTGTTGGCACCATGG 2164 Query 1855 GAGGAATACTTTCTATCATCTCTGAAAGATTTACCCATCACTAAGTCTCCTCTGCCATCA 1914 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 2165 GAGGAATACTTTCTATCATCTCTTAAAGATTTACCCATCACTAAGTCTCCTCTGCCATCA 2224 Query 1915 ATAGACCCAGAAACTGTAAAAAAGGTGCAAAAGGCGCTTTGCCATGTTGAGATGAGGAAC 1974 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 2225 ATAGACCCAGAAACTGTAAAAAAGGTGCAAAAGGCGCTTTGCCATGTCGAGATGAGGAAC 2284 Query 1975 AAGGAGGCGGCGTATCAGGCTTGGTTGGGTTACTACAACTCACAGAAGATGATTGGAAGA 2034 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2285 AAAGAGGCGGCGTATCAGGCTTGGTTGGGTTACTACAACTCACAGAAGATGATTGGAAGA 2344 Query 2035 GACAAAGACAGGCTTGTGGAGTTGGCAAACGAGTTTAGTCGTAGTATGGGACTTGACAAT 2094 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2345 GACAAAGACAGGCTTGTGGAGTTGGCAAACGAGTTTAGTCGTAGTATGGGACTTGACAAT 2404 Query 2095 CCTCCAGCTATACCAAAACTTATTCTTGGTAAGATGGGTCTCAAAAATGTTCCTGGTCTC 2154 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 2405 CCTCCAGCTATACCAAAACTTATCCTTGGTAAGATGGGTCTCAAAAATGTTCCTGGTCTT 2464 Query 2155 AGAGCCAAGTAA 2166 |||||||||||| Sbjct 2465 AGAGCCAAGTAA 2476 > AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:2790295-2794215 FORWARD LENGTH=2755 Length=2755 Score = 1373 bits (743), Expect = 0.0 Identities = 1215/1443 (84%), Gaps = 32/1443 (2%) Strand=Plus/Plus Query 739 GATTCTTATTTGACTAAGACAAGATTTGATCAGTAT-CCATTGTCTCCCTTATCGCTAAA 797 |||||||| ||| ||||||||||||||||||| | | ||| | ||||||||||||||||| Sbjct 1172 GATTCTTACTTGTCTAAGACAAGATTTGATCAAT-TCCCACTCTCTCCCTTATCGCTAAA 1230 Query 798 AGCCATCAAGGATGCTGGATACGAGACAATGACTGTTGTGCAGGAAGCTACTCTCCCTAT 857 ||||||||||||||| |||| ||||||||||||||||||||||| |||||||| ||||| Sbjct 1231 AGCCATCAAGGATGCGGGATTTGAGACAATGACTGTTGTGCAGGAGGCTACTCTTCCTAT 1290 Query 858 AATTCTCAAAGGTAAAGATGTCCTAGCTAAGGCCAAAACAGGAACTGGGAAAACTGTAGC 917 |||||| ||||||||||||||||||| |||||||||||||| ||||| ||||| || || Sbjct 1291 CATTCTCCAAGGTAAAGATGTCCTAGCCAAGGCCAAAACAGGCACTGGTAAAACCGTTGC 1350 Query 918 GTTTTTGCTTCCATCAATTGAAG-TAGTTGTCAAATCTCCTCCTACAAGCCCGGATAATA 976 |||||||||||| ||||||||| | ||| |||||||||||||| |||||| ||||| || Sbjct 1351 ATTTTTGCTTCCAGCAATTGAAGCT-GTTATCAAATCTCCTCCTGCAAGCCGGGATAGTA 1409 Query 977 AGCGACCCCCAATTCTTGCGCTTGTGATATGCCCAACTAGAGAACTTGCCAATCAAGCTG 1036 || |||||||||| ||| ||||||| |||| || ||| | |||||||||| |||||||| Sbjct 1410 GGCAACCCCCAATTATTGTGCTTGTGGTATGTCCTACTCGGGAACTTGCCAGTCAAGCTG 1469 Query 1037 CAACAGAAGCAAACACCTTGCTAAAGTATCATCCATCTATTGGTGTTCAAGTTGTGATTG 1096 | |||| ||||| ||||| || |||||||| || ||||||||||||||||||||||||| Sbjct 1470 CGGCAGAGGCAAATACCTTACTGAAGTATCACCCCTCTATTGGTGTTCAAGTTGTGATTG 1529 Query 1097 GAGGCACAA-GACTTGGTTTAGAGCAAAAGCTTATGCAAACAAATCCTTGCCAGATT-TT 1154 ||||||||| | ||| | |||||||| || ||||||||| |||||||||||||| || Sbjct 1530 GAGGCACAAAG-CTTCCTACAGAGCAAAGGCGTATGCAAACGAATCCTTGCCAGATCCTT 1588 Query 1155 AGTGGCTACACCTGGAAGGCTCAAAGACCATATCGAGAACACGCCAGGCTTTGCAACAAG 1214 |||||||||||||||||||||||||||||||| || ||||| | || || |||||||| Sbjct 1589 -GTGGCTACACCTGGAAGGCTCAAAGACCATATTGAAAACACTTCTGGATTCGCAACAAG 1647 Query 1215 GTTAAAGGGTGTGAAAGTCCTTGTGCTTGATGAAGCTGATCATCTTTTAGACATGGGCTT 1274 || | |||||||||||||||||||||||| |||||||||||||| || |||||||| || Sbjct 1648 ATTGATGGGTGTGAAAGTCCTTGTGCTTGACGAAGCTGATCATCTCTTGGACATGGG-TT 1706 Query 1275 TC-GCAAGG-ACATTGAGAGGATAATTTCCGCTGTTCCTAAGGAGAGACAAAC-TTTTCT 1331 || | |||| ||||||||||||||||| |||||||||||||| |||||||||| |||| | Sbjct 1707 TCCG-AAGGGACATTGAGAGGATAATTGCCGCTGTTCCTAAGCAGAGACAAACATTTT-T 1764 Query 1332 ATTTTCTGCCACAGTACCTGAAGAGGTTCGCCAAATATGCC-TAGTTGCTCTGAGGCGGG 1390 |||||||||||| |||||||||||||| ||||||||||||| | |||||||||| |||| Sbjct 1765 ATTTTCTGCCACCGTACCTGAAGAGGTCCGCCAAATATGCCAT-GTTGCTCTGAAACGGG 1823 Query 1391 ATCACGAGTTTGTCAATTGTGTTCATGAAGGCACTATAGAGACGCATCAACAGGTCAGAC 1450 |||| ||||| |||||||||| || || ||| || ||||| |||||| |||||| || Sbjct 1824 ATCATGAGTTCATCAATTGTGTCCAAGAGGGCTCTGGGGAGACACATCAAAAGGTCACAC 1883 Query 1451 AAATGCACATGATTGCATCACTAGACAGACATTTCTCTCTTGTGTACACA--CTTCTTCG 1508 ||||| |||||||||||||||| || |||||||| || ||| | ||| |||||| Sbjct 1884 AAATGTACATGATTGCATCACTGGATAGACATTTTTCGCTTCT--ACATGTGCTTCTTAA 1941 Query 1509 CCAACACATTATGGATAACGTAGACTATAAGGTCATTGTCTTCTGTACAACTGCCATGGT 1568 ||||||| ||||| || ||||||||||| || | |||||||||||||| ||||| Sbjct 1942 AGAACACATCGCAGATAATGTGGACTATAAGGTTATCATTTTCTGTACAACTGCTATGGT 2001 Query 1569 TACAAAATTAGTTGCTGATCTACT-AGGTGAGATAAACTTAAATGTGAGAGAGATCCATT 1627 |||| ||| || |||||||| || || | || ||| | | || || ||||||||||||| Sbjct 2002 GACAAGATTGGTGGCTGATCTGCTTAG-TCAGCTAAGCCTGAACGTCAGAGAGATCCATT 2060 Query 1628 CTAGAAAACCGCAGAGTTACAGGACGAGGGTTTCTAATGAGTTCCGAAAATCCAAGGGT- 1686 |||||||||||||||||||||| || || |||||| |||||||||| || ||||||| | Sbjct 2061 CTAGAAAACCGCAGAGTTACAGAACCAGAGTTTCTGATGAGTTCCGCAAGTCCAAGGCTA 2120 Query 1687 TTGATTCTGGTAACATCTGATGTATCTGCTCGAGGAGTCGATTACCCTGATGTGACCCTT 1746 || || || || |||||||||||||||||||| || || ||||||||||||||| | || Sbjct 2121 TT-ATCCTAGTCACATCTGATGTATCTGCTCGTGGTGTGGATTACCCTGATGTGTCA-TT 2178 Query 1747 GTTT-TACAGGTGGGATTGCCAAAAGACAGAGAACAATATATACACAGACTTGGTAGAAC 1805 | | ||||| ||||||||||| |||||| || || |||||||| |||||||| ||||| Sbjct 2179 GGTCGTACAGATGGGATTGCCATCAGACAGGGAGCAGTATATACATAGACTTGGCAGAAC 2238 Query 1806 GGGGAGAAAAGGAAAGGAAGGAGAAGGCCTATTGTTGTTGGCACCATGGGAGGAATACTT 1865 ||| | ||||| |||||||| ||||| | || ||||||||||||||||| || ||||| Sbjct 2239 CGGGCGGAAAGGGAAGGAAGGGGAAGGAGTCTTATTGTTGGCACCATGGGAAGAGTACTT 2298 Query 1866 TCTATCATCTCTGAAAGATTTACCCATCACTAAGTCTCCTCTGCCATCAATAGACCCAGA 1925 | | |||||| | ||||| || |||||||| |||||||| || || ||||||||||||| Sbjct 2299 TATGTCATCTGTTAAAGACTTGCCCATCACCAAGTCTCCACTACCGCCAATAGACCCAGA 2358 Query 1926 AACTGTAAAAAAGGTGCA-AAAGGCGCTTTGCCATGTTGAGATGAGGAACAAGGAGGCGG 1984 |||| |||| |||||| ||||| ||| |||| || || |||| |||||||||||||| Sbjct 2359 GGCTGTGAAAAGGGTGCAGAAAGG-GCTGAGCCAAGTGGAAATGAAGAACAAGGAGGCGG 2417 Query 1985 CGTATCAGGCTTGGTTGGGTTACTACAACTCACAGAAGATGATTGGAAGAGACAAAGAC- 2043 |||||||||| ||||||||||||||||| || ||||||||||||| |||||||| ||| Sbjct 2418 CGTATCAGGCGTGGTTGGGTTACTACAAATCTCAGAAGATGATTGCAAGAGACAC-GACC 2476 Query 2044 AGGCTTGTGGAGTTGGCAAACGAGTTTAGTCGTAGTATGGGACTTGACAATCCTCCAGCT 2103 || || |||||| |||| || |||||||| || || ||||||||||||| || |||||| Sbjct 2477 AGACTGGTGGAGCTGGCCAATGAGTTTAGCCGCAGCATGGGACTTGACAGCCCACCAGCT 2536 Query 2104 ATACC-AAAACTTATTCTTGGTAAGATGGGTCTCAAAAATGTTCCTGGTCTCAGAGCCAA 2162 || || |||| | ||||||| ||||||||||||||||| ||||||||||| ||| |||| Sbjct 2537 ATCCCCAAAAATG-TTCTTGGCAAGATGGGTCTCAAAAACGTTCCTGGTCTTAGAACCAA 2595 Query 2163 GTA 2165 ||| Sbjct 2596 GTA 2598 > AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase family protein | chr5:2794457-2797660 FORWARD LENGTH=1887 Length=1887 Score = 1282 bits (694), Expect = 0.0 Identities = 1200/1442 (83%), Gaps = 44/1442 (3%) Strand=Plus/Plus Query 739 GATTCTTATTTGACTAAGACAAGATTTGATCAGTAT-CCATTGTCTCCCTTATCGCTAAA 797 |||||||||||| | ||||||||||||||||||| | ||| ||||||||||| || |||| Sbjct 303 GATTCTTATTTGTCAAAGACAAGATTTGATCAGT-TCCCACTGTCTCCCTTAACGTTAAA 361 Query 798 AGCCATCAAGGATGCTGGATACGAGACAATGACTGTTGTGCAGGAAGCTACTCTCCCTAT 857 || || |||||||||||| |||||||||||||||| ||||| |||||||| ||| | Sbjct 362 AGGAATTGAGGATGCTGGATTTAAGACAATGACTGTTGTTCAGGAGGCTACTCTTCCTCT 421 Query 858 AATTCTCAAAGGTAAAGATGTCCTAGCTAAGGCCAAAACAGGAACTGGGAAAACTGTAGC 917 |||||| ||||||||||| |||| || |||||||||||||| ||||||||||| || || Sbjct 422 CATTCTCCAAGGTAAAGATATCCTTGCGAAGGCCAAAACAGGCACTGGGAAAACAGTTGC 481 Query 918 GTTTTTGCTTCCATCAATTGAAG-TAGTTGTCAAATCTCCTCCTACAAGCCCG-GATAAT 975 |||||||||||||||||||||| | ||| ||||| |||||||| |||| ||| |||||| Sbjct 482 ATTTTTGCTTCCATCAATTGAAGCT-GTTATCAAAGCTCCTCCTGCAAG-CCGTGATAAT 539 Query 976 AAGCGA-CCCCCAATTCTTGCGCTTGTGATATGCCCAACTAGAGAACTTGCCAATCAAGC 1034 | || | ||||||||| ||| ||||||| |||| || ||| | |||||||| |||||| Sbjct 540 AGGC-ATCCCCCAATTATTGTGCTTGTGGTATGTCCTACTCGGGAACTTGCTTGTCAAGC 598 Query 1035 TGCAACAGAAGCAAACACCTTGCTAAAGTATCATCCATCTATTGGTGTTCAAGTTGTGAT 1094 ||| |||||||||||| |||||| |||||||| |||||||||||||||||||||||||| Sbjct 599 TGCTGCAGAAGCAAACATCTTGCTCAAGTATCACCCATCTATTGGTGTTCAAGTTGTGAT 658 Query 1095 TGGAGGCAC-AAGACTTGGTTTAGAGCAAAAGC-TTATGCAAACA-AATCCTTGCCAGAT 1151 ||||||||| ||| ||| | ||||||| || | |||||| | | |||||||||||| Sbjct 659 TGGAGGCACTAAG-CTTCCTACGGAGCAAAGGCGCT-TGCAAA-AGAGTCCTTGCCAGAT 715 Query 1152 TTTAGTGGCTACACCTGGAAGGCTCAAAGACCATATCGAGAACACGCCAGGCTTTGCAAC 1211 | | ||||||||||| ||||||||||||||||||||||| ||||| | || |||||||| Sbjct 716 TCTCGTGGCTACACCCGGAAGGCTCAAAGACCATATCGACAACACTTCTGGATTTGCAAC 775 Query 1212 AAGGTTAAAGGGTGTGAAAGTCCTTGTGCTTGATGAAGCTGATCATCTTTTAGACATGGG 1271 |||||| | ||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 776 AAGGTTGATGGGTGTGAAAGTCCTTGTGCTTGATGAAGCTGATCATCTCTTGGACATGGG 835 Query 1272 CTTTC-GCAAGG-ACATTGAGAGGATAATTTCCGCTGTTCCTAAGGAGAGACAAAC-TTT 1328 |||| | |||| | ||||||||||||||| | |||||||||||| |||||||||| ||| Sbjct 836 -TTTCCG-AAGGGAAATTGAGAGGATAATTGCTGCTGTTCCTAAGCAGAGACAAACATTT 893 Query 1329 TCTATTTTCTGCCACAGTACCTGAAGAGGTTCGCCAAATATGCC-TAGTTGCTCTGAGGC 1387 | ||||||| ||||||||| |||| ||||| ||||||||||||| | |||||||||| | Sbjct 894 T-TATTTTCCGCCACAGTATCTGATGAGGTCCGCCAAATATGCCAT-GTTGCTCTGAAAC 951 Query 1388 GGGATCACGAGTTTGTCAATTGTGTTCATGAAGGCACTATAGAGACGCATCAACAGGTCA 1447 ||||||| || || ||||| |||||||| || || || |||||||||||| |||| Sbjct 952 GGGATCATGAATTCGTCAACTGTGTTCAAGAGGGTGCTGGGGAGACGCATCAAAAGGTTT 1011 Query 1448 GACAAATGCACATGATTGCATCACTAGACAGACATTTCTCTCTTGTGTACACACTTCTTC 1507 ||||||| |||||||||||||| |||| ||||||||||| ||| | || ||||| Sbjct 1012 CACAAATGTACATGATTGCATCATTAGATAGACATTTCTCGCTTCTATATGGTCTTCTGA 1071 Query 1508 GCCAACACATTATGGATAACGTAGACTATAAGGTCATTGTCTTCTGTACAACTGCCATGG 1567 ||||||| | ||||| || | ||||||||| ||| | |||||||||||||| |||| Sbjct 1072 AAAAACACATCACAGATAATGTGGGCTATAAGGTTATTATTTTCTGTACAACTGCTATGG 1131 Query 1568 TTACAAAATTAGTTGCTGATCTACTAGGTGAGATAAAC-TTAAATGTGAGAGAGATCCAT 1626 |||||| ||| || |||||||| || ||| || ||| | |||| || |||||||||||| Sbjct 1132 TTACAAGATTGGTGGCTGATCTGCTTGGTAAGCTAAGCCTTAAC-GTCAGAGAGATCCAT 1190 Query 1627 TCTAGAAAACCGCAGAGTTACAGGACGAGGGTTTCTAATGAGTTCCGAAAATCCAAGGGT 1686 ||||||||||||||||||||||| || || |||||| |||||||||| || |||||| || Sbjct 1191 TCTAGAAAACCGCAGAGTTACAGAACCAGAGTTTCTGATGAGTTCCGCAAGTCCAAGAGT 1250 Query 1687 -TTGATTCTGGTAACATCTGATGTATCTGCTCGAGGAGTCGATTACCCTGATGTGACCCT 1745 || || || || |||||||||||||||||||| || || ||||||||||||||| || | Sbjct 1251 ATT-ATCCTTGTGACATCTGATGTATCTGCTCGTGGTGTTGATTACCCTGATGTGTCC-T 1308 Query 1746 T-GTTTTACAGGTGGGATTGCCAAAAGACAGAGAACAATATATACACAGACTTGGTAGAA 1804 | || ||||| ||||||||||| |||||| |||||||||||||| |||||||| |||| Sbjct 1309 TAGTCGTACAGATGGGATTGCCATCAGACAGGGAACAATATATACATAGACTTGGCAGAA 1368 Query 1805 CGGGGAGAAAAGGAAAGGAAGGAGAAGGCCTATTGTTGTTGGCACCATGGGAGGAATACT 1864 | ||| | ||||| |||||||||||||| || | ||||||||||| ||||| || |||| Sbjct 1369 CTGGGCGGAAAGGTAAGGAAGGAGAAGGTGTACTATTGTTGGCACCGTGGGAAGAGTACT 1428 Query 1865 TTCTATCATCTCTGAAAGATTTACCCATCACTAAGTCTCCTCTGCCATCAATAGACCCA- 1923 ||||||| ||| | || || || |||||||| |||||| || | || ||||||||| | Sbjct 1429 TTCTATCTTCTGTTAAGGACTTGCCCATCACAAAGTCTTCTTTACCGCCAATAGACC-AT 1487 Query 1924 GAAACTGTAAAAAAGGTGCA-AAAGGCGCTT-TGCCATGTTGAGATGAGGAACAAGGAGG 1981 || |||| ||||||||||| ||||| |||| | ||| || || |||| ||||||||||| Sbjct 1488 GAGGCTGTGAAAAAGGTGCAGAAAGG-GCTTAT-CCAAGTGGAAATGACGAACAAGGAGG 1545 Query 1982 CGGCGTATCAGGCTTGGTTGGGTTACTACAACTCACAGAAGATGATTGGAAGAGACAAAG 2041 |||| |||||||| ||||||||||||||||| || ||||||| ||||| ||||||| | Sbjct 1546 CGGCATATCAGGCATGGTTGGGTTACTACAAATCGCAGAAGAAGATTGCTAGAGACAC-G 1604 Query 2042 AC-AGGCTTGTGGAGTTGGCAAACGAGTTTAGTCGTAGTATGGGACTT-GACAATCC-TC 2098 || || || |||||||| || || |||||||| || |||||||||||| | || ||| || Sbjct 1605 ACCAGACTGGTGGAGTTAGCTAATGAGTTTAGCCGCAGTATGGGACTTAG-CA-TCCCTC 1662 Query 2099 CAGCTATACCA--AAACTTATTCTTGGTAAGATGGGTCTCAAAAATGTTCCTGGTCTCAG 2156 | ||||| || ||| | |||||||| ||||||||||||||||| ||||||||| | || Sbjct 1663 CGGCTATCCCTGTAAA-T-ATTCTTGGCAAGATGGGTCTCAAAAACGTTCCTGGTATTAG 1720 Query 2157 AG 2158 || Sbjct 1721 AG 1722 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 107429166300 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5