BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg918311

Length=315
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT5G65158.1 | Symbols:  | Lipase/lipooxygenase, PLAT/LH2 family...   538    1e-152


> AT5G65158.1 | Symbols:  | Lipase/lipooxygenase, PLAT/LH2 family 
protein | chr5:26030100-26031003 FORWARD LENGTH=809
Length=809

 Score =  538 bits (291),  Expect = 1e-152
 Identities = 307/315 (97%), Gaps = 0/315 (0%)
 Strand=Plus/Plus

Query  1    ATGAGCCTCCGTCTTTACGACAGTTACGGTCGAGACGCGGTTATCTCCGATTTGGTGTCA  60
            ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct  196  ATGAGCCTCCGTCTTTACGACAGTTACGGTCAAGACGCGGTTATCTCCGATTTGGTGTCA  255

Query  61   TGGGGAGGTTTAATGGGTCCGTTTCATGACTATTTTGAGAGGGGCAATCTCGACATTTTC  120
            |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct  256  TGGGGAGGTTTAATGGGTCCATTTCATGACTATTTCGAGAGGGGCAATCTCGACATTTTC  315

Query  121  AGTGGTTTAGGTTCTTGTCTCTCAGGTCCGGTTTGTGCAATGAATTTGACATCCGATGGC  180
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct  316  AGTGGTTTAGGTTCTTGCCTCTCAGGTCCGGTTTGTGCAATGAATTTGACATCCGATGGC  375

Query  181  TCTGGTGATCATCACGGTTGGTATTGTAATTACGTGGAAGTGACGATGAGTGAGAGCCGT  240
            |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct  376  TCTGGTGATCATCACGGTTGGTATTGTAATTACGTGGAAGTGACCATGAGTGAGAGCCGT  435

Query  241  CGGAGAAGTTGTTCTCAGGAGAAGTTTGAAGTGGAGCAATGGCTGGCTCGTGATGCTTCG  300
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| 
Sbjct  436  CGGAGAAGTTGTTCACAGGAGAAGTTTGAAGTGGAGCAATGGCTGGCTCGTGATGCTTCA  495

Query  301  CCGTATGAGCTATAG  315
            ||||||||||| |||
Sbjct  496  CCGTATGAGCTGTAG  510



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 14627914959


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5