BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg918350 Length=1329 Score E Sequences producing significant alignments: (Bits) Value AT5G65510.1 | Symbols: AIL7 | AINTEGUMENTA-like 7 | chr5:261858... 1914 0.0 AT5G10510.3 | Symbols: AIL6 | AINTEGUMENTA-like 6 | chr5:331552... 405 5e-112 > AT5G65510.1 | Symbols: AIL7 | AINTEGUMENTA-like 7 | chr5:26185829-26189413 FORWARD LENGTH=1497 Length=1497 Score = 1914 bits (1036), Expect = 0.0 Identities = 1243/1339 (93%), Gaps = 30/1339 (2%) Strand=Plus/Plus Query 1 ATGGCGGATTCAACAA-CTCTATCCACTTTTTTCGATTCGCAAATCCATTCTCAGGCTCA 59 |||||||||||||||| || |||| || |||| |||| || ||||||||| |||| Sbjct 175 ATGGCGGATTCAACAACCT-TATCTAC--TTTT---TTCG---AT-CATTCTCAGACTCA 224 Query 60 GATTCCAAAGCTCGAAGATTTTCTCGGTGATTCCTTCGTTCGTTACTCTGATAACCAAAC 119 |||||||||||| |||||||| |||||||||||||| || |||||||||||||||||||| Sbjct 225 GATTCCAAAGCTGGAAGATTTCCTCGGTGATTCCTTTGTCCGTTACTCTGATAACCAAAC 284 Query 120 AGAGACACAAGACTCTTCTTCTCTCACTCGATTCTACGATCTACGTCACCACACCGATGC 179 |||||| |||||||||||||||||||||| ||||||||||| |||||||| ||||| ||| Sbjct 285 AGAGACCCAAGACTCTTCTTCTCTCACTCCATTCTACGATCCACGTCACCGCACCGTTGC 344 Query 180 CGGAGGAGTTTCAGAGTTCTTCTCCGATCATCATCAGCAGCACGATTTCAAGACGATAAA 239 || ||||||| ||| ||||||||| ||||||||||||| || ||||||||||||||||| Sbjct 345 CGAAGGAGTTACAGGGTTCTTCTCTGATCATCATCAGC--CA-GATTTCAAGACGATAAA 401 Query 240 CTCGGGATCAGAAAT-TGTCGATGACTCCACAGCTTCCAACATCGGTGGTACTCATCTTT 298 ||||||| ||||||| | |||||||||| ||| ||||||||||||||||||||||||| | Sbjct 402 CTCGGGACCAGAAATCT-TCGATGACTCAACAACTTCCAACATCGGTGGTACTCATCTCT 460 Query 299 CTAGTCACGTGGTGGAGTCATCAACGACGGCAG-AGTTAGGGTTTAACGGTGGTTG---C 354 | ||||||||||||||||||||||||||||| | |||||||||||||||||| ||| | Sbjct 461 CCAGTCACGTGGTGGAGTCATCAACGACGGC-GAAGTTAGGGTTTAACGGTGATTGCACC 519 Query 355 ACCACCGGAGGAGCTTTGTCTCTAGGGGTTAACAACACATCAGATCAACATTTAATAAGC 414 ||||||||||||| ||||||||||||||||||||||||||||||||||| || | ||| Sbjct 520 ACCACCGGAGGAGTTTTGTCTCTAGGGGTTAACAACACATCAGATCAAC-CTT--TGAGC 576 Query 415 TGTAATAATGGCGAGAGAGGTGAAAACAGCAACAAGAAGAAGACAGTGTCTAAGAAGGAA 474 ||||| |||||||||||||||| |||||| ||||||||||| ||||| |||||||||||| Sbjct 577 TGTAACAATGGCGAGAGAGGTGGAAACAGTAACAAGAAGAAAACAGTTTCTAAGAAGGAA 636 Query 475 ACATCGGATGATTCAAAGAAGAAGACTGTCGAAACATTGGGACAAAGAACTTCGGTTTAT 534 ||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||| Sbjct 637 ACATCAGATGATTCAAAGAAGAAGATTGTCGAAACATTGGGACAAAGAACTTCAATTTAT 696 Query 535 CGTGGAGTCACCCGACATAGGTGGACTGGAAGATATGAAGCACATCTATGGGACAACAGC 594 |||||||||||||||||||| |||||||||||||| ||||| ||||||||||| |||||| Sbjct 697 CGTGGAGTCACCCGACATAGATGGACTGGAAGATACGAAGCGCATCTATGGGATAACAGC 756 Query 595 TGTAGGAGGGAAGGTCATGCCAGAAAAGGACGTCAAGTGTACTTAGGTGGATATGACAAG 654 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 757 TGTAGGAGGGAAGGTCAAGCCAGAAAAGGACGTCAAGTGTACTTAGGTGGATATGACAAG 816 Query 655 GAAGATAGAGCAGCTAGAGCCTATGACTTGGCAGCTTTAAAATACTGGGGTCCTACTGCT 714 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 817 GAAGATAGAGCAGCTAGAGCCTATGACTTGGCAGCTTTAAAATACTGGGGTTCTACTGCT 876 Query 715 ACTACAAATTTTCCGGTCGCGAGTTATTCAAAAGAACTTGAGGAAATGAATCACATGACC 774 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 877 ACTACAAATTTTCCGGTCTCGAGTTATTCAAAAGAACTTGAGGAAATGAATCACATGACC 936 Query 775 AAGCTAGAGTTTATTGCATCTCTTAGGAGGAAAAGTAGCGGTTTTTCGAGAGGAGCTTCT 834 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 937 AAGCAAGAGTTTATTGCATCTCTTAGGAGGAAAAGTAGCGGTTTTTCGAGAGGAGCTTCA 996 Query 835 ATGTATAGAGGTGTGACAAGGCATCACCAACAAGGTCGTTGGCAAGCAAGAATCGGCCGT 894 || ||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct 997 ATATATAGAGGTGTCACAAGGCATCATCAACAAGGTCGCTGGCAAGCAAGAATCGGCCGT 1056 Query 895 GTCGCAGGAAACAAAGATCTTTACCTCGGAACCTTTGCAACGGAAGAGGAAGCAGCAGAG 954 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1057 GTCGCAGGAAACAAAGATCTTTACCTCGGAACCTTTGCAACCGAAGAGGAAGCAGCAGAG 1116 Query 955 GCTTATGACATTGCAGCCATAAAGTTCAGAGGAATCAACGCAGTAACTAACTTTGAAATG 1014 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1117 GCTTATGACATTGCAGCCATAAAGTTCAGAGGAATCAACGCAGTAACTAACTTTGAGATG 1176 Query 1015 AACCGGTATGACGTGGAAGCTGTCATGAAAAGTTCTTTCCCTGTAGGAGGAGCAGCTGCG 1074 ||| |||||||| | |||||||||||||| |||||||| ||||||||||||||||||||| Sbjct 1177 AACAGGTATGACATTGAAGCTGTCATGAATAGTTCTTTACCTGTAGGAGGAGCAGCTGCG 1236 Query 1075 AAACGCCACAAACTC----TC--TCTTGAATCTCCTTCTTCATCATCCTCCGACCATAAC 1128 ||||||||||||||| || ||||||||||||||||||||||||||| ||||||||| Sbjct 1237 AAACGCCACAAACTCAAACTCGCTCTTGAATCTCCTTCTTCATCATCCTCTGACCATAAC 1296 Query 1129 ATCCAACAACAACATTTGGTTCCGTCCTCTTCTTCCTCGGATCACAACCCTAACTCAATC 1188 ||||||||||||| ||| |||||||||||||| |||||||||| ||||||||||||||| Sbjct 1297 CTCCAACAACAACAGTTGCTTCCGTCCTCTTCTCCCTCGGATCAAAACCCTAACTCAATC 1356 Query 1189 CCATGTGGCATTCCATTTGAATCTTCAGTTCTCTATCACCACCAGAACTTCTTCCAGCAT 1248 |||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||| Sbjct 1357 CCATGTGGCATTCCATTTGAGCCTTCAGTTCTCTATTACCACCAGAACTTCTTTCAGCAT 1416 Query 1249 TATCCTTTGGTTTCTGACTCTACAGTTCAAGTTCCTATGAACCAAGCTGAGTTTTTCTTG 1308 ||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct 1417 TATCCTTTGGTCTCTGACTCTACAATTCAAGCTCCTATGAACCAAGCTGAGTTTTTCTTG 1476 Query 1309 TGGCCTAACCAGTCTTACT 1327 ||||||||||||||||||| Sbjct 1477 TGGCCTAACCAGTCTTACT 1495 > AT5G10510.3 | Symbols: AIL6 | AINTEGUMENTA-like 6 | chr5:3315529-3320202 FORWARD LENGTH=2471 Length=2471 Score = 405 bits (219), Expect = 5e-112 Identities = 393/477 (82%), Gaps = 11/477 (2%) Strand=Plus/Plus Query 641 GTGGATATGACAAGGAAGAT-AGAGCAGCTAGAGCCTATGACTTGGCAGCTTTAAAATAC 699 ||||||||||||| |||||| || |||||| |||| || || || |||||| | |||||| Sbjct 1436 GTGGATATGACAAAGAAGATAAG-GCAGCTCGAGCTTACGATTTAGCAGCTCTGAAATAC 1494 Query 700 TGGGGTCCTACTGCTACTACAAATTTTCCGGTCGCGAGTTATTCAAAAGAACTTGAGGAA 759 ||| | |||||||||| || ||||| || | ||| ||| || |||||| | |||||| Sbjct 1495 TGGAATGCTACTGCTACCACCAATTTCCCTATTACGAATTACTCGAAAGAAGTGGAGGAA 1554 Query 760 ATGAATCACATGACCAAGCTAGAGTTTATTGCATCTCTTAGGAGGAAAAGTAGCGGTTTT 819 ||||| ||||||||||||| |||||| ||||| || || |||||||| ||||||||||| Sbjct 1555 ATGAAGCACATGACCAAGCAAGAGTTCATTGCCTCCCTCAGGAGGAAGAGTAGCGGTTTC 1614 Query 820 TCGAGAGGAGCTTCTATGTATAGAGGTGTGACAAGGCATCACCAACAAGGTCGTTGGCAA 879 || ||||||||||| || || ||||||| ||||||||||| |||||||| ||||||||| Sbjct 1615 TCTAGAGGAGCTTCGATATACCGAGGTGTTACAAGGCATCATCAACAAGGACGTTGGCAA 1674 Query 880 GCAAGAATCGGCCGTGTCGCAGGAAACAAAGATCTTTACCTCGGAACCTTTGCAACGGAA 939 ||||| || ||||| || || || ||||||||||||||||| |||||||||||||||||| Sbjct 1675 GCAAGGATTGGCCGAGTTGCTGGGAACAAAGATCTTTACCTTGGAACCTTTGCAACGGAA 1734 Query 940 GAGGAAGCAGCAGAGGCTTATGACATTGCAGCCAT-AAAGTTCAGAGGAATCAACGCAGT 998 ||||||||||| || || |||||||| ||||| || ||| ||||||||||| ||||| || Sbjct 1735 GAGGAAGCAGCTGAAGCGTATGACATAGCAGCAATCAAA-TTCAGAGGAATAAACGCTGT 1793 Query 999 AACTAACTTTGAAATGAACCGGTATGACGTGGAAGCTGTCATGAAAAGTTCT-TTCCCTG 1057 |||||||||||| |||||||| || ||||| ||||| ||||||| ||| | ||||| Sbjct 1794 AACTAACTTTGAGATGAACCGTTACGACGTTGAAGCCATCATGAAGAGTGCACTTCCCA- 1852 Query 1058 TAGGAGGAGCAGCTGCGAAACGCCACAAACTCTCTCTTG-AATCTCCTTCTTCATCA 1113 | || || |||||| ||||| | || |||||| ||| || || || |||||||| Sbjct 1853 TCGGTGGTGCAGCT---AAACGTCTTAAGCTCTCT-TTGGAAGCTGCTGCTTCATCA 1905 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 65411310135 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5