BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg918474
Length=2379
Score E
Sequences producing significant alignments: (Bits) Value
AT5G66960.1 | Symbols: | Prolyl oligopeptidase family protein ... 3834 0.0
> AT5G66960.1 | Symbols: | Prolyl oligopeptidase family protein
| chr5:26736209-26739493 REVERSE LENGTH=2379
Length=2379
Score = 3834 bits (2076), Expect = 0.0
Identities = 2283/2384 (96%), Gaps = 10/2384 (0%)
Strand=Plus/Plus
Query 1 ATGTTGAGCCATCTCTCTCGGACCTTCTT-CCGTCGTAATTGTCGTTTCCGGCAACAACA 59
||||||||| |||||||||||||||| || ||||| |||||| |||||||||| ||||||
Sbjct 1 ATGTTGAGCAATCTCTCTCGGACCTT-TTCCCGTCATAATTGCCGTTTCCGGCGACAACA 59
Query 60 ATGTCGCCGTTACAAGCCTCCGAAGTC-CCAACCGCCTCCTCCACCACCACCAGCGTTAC 118
||||||| ||||||||||||||||||| || |||||||||||||||||||||||| ||||
Sbjct 60 ATGTCGCTGTTACAAGCCTCCGAAGTCTCC-ACCGCCTCCTCCACCACCACCAGCATTAC 118
Query 119 CAAAGCCGCCGAAGAAGCCTCAAACTTTCACCTTCCAGGACGCGACGTGGGAGGATCCAT 178
|||| |||||||||||||| || | |||||||||||| ||||||||||||||||||||||
Sbjct 119 CAAAACCGCCGAAGAAGCCGCAGAGTTTCACCTTCCACGACGCGACGTGGGAGGATCCAT 178
Query 179 ACAGTTGGATGTCGAAGCTGGAAGATAAAGTGGCGATGAGGCATATGGATATCTATATGG 238
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 179 ACAGTTGGATGTCTAAGCTGGAAGATAAAGTGGCGATGAGGCATATGGATATCTATATGG 238
Query 239 AGCAAGAAGAGAAGTATACCGAAGCTGTTTTGGCTGATACTGATCGGATTCAGACCAAGC 298
||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 239 AGCAAGAGGAGAAGTATACCGAAGCCGTTTTGGCTGATACTGATCGGATTCAGACCAAGC 298
Query 299 TTCAGTCTGAAATGGCTTCTCGTTTGTCCTTTGAGCTCTCCACGCCTCCTCTTCGTTGGG 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 299 TTCAGTCTGAAATGGCTTCTCGTTTGTCCTTTGAGCTCTCCACGCCTCCTCTTCGTTGGG 358
Query 359 GACCTTGGTTGTATTATAGACGTGTTGAAGAAGGGAAGCAGTATCCAGTACTGTGTAGGA 418
|||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct 359 GACCTTGGTTGTATTATAGAAGGGTTGAAGAAGGGAAGCAGTATCCAGTACTGTGTAGGA 418
Query 419 GGCTAGCGAGCTTGCACGAGGAGTTCATTTCTCATAAATCTCCTGCTGCAGGGTTTGATT 478
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 419 GGCTAGCGAGCTTGCACGAGGAGTTCATTTCTCATAAGTCTCCTGCTGCAGGGTTTGATT 478
Query 479 TTACATCTGGGAAGAGGATTGAGCAGAAGCTTATTGATTACAATCAGGAAGCTGAGAGAT 538
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 479 ACACATCTGGGAAGAGGATTGAGCAGAAGCTGCTTGATTACAATCAGGAAGCTGAGAGAT 538
Query 539 TTGGAGGTTATGCTTATGAAGAGATGTCAGAGATATCCCCTGACCATAAATTTCTAGCGT 598
||||||||||||||||||| || |||||||||||||| |||||||||||||||||||| |
Sbjct 539 TTGGAGGTTATGCTTATGAGGAAATGTCAGAGATATCTCCTGACCATAAATTTCTAGCAT 598
Query 599 ACACTATGTATGATAAGGACAATGATTACTTCAAGTTGTGTGTGAGAAACTTGAATTCTG 658
| ||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||
Sbjct 599 ATACTATGTATGATAAGGATAACGATTACTTTAAGTTGTGTGTGAGAAACTTGAATTCTG 658
Query 659 GAGCTTTATGTAGTAAGCCTCACGCAGATCGTGTCTCCAACATAGCGTGGGCAAAAAATG 718
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 659 GAGCTTTATGTAGTAAGCCTCACGCAGATCGTGTCTCTAACATAGCGTGGGCAAAGAATG 718
Query 719 GGCAGGCCTTGCTCTATGTCGTTACTGATCAGAAAAAACGGCCATTCAGGATATATTGTA 778
||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 719 GGCAGGCTTTGCTCTATGTCGTTACTGATCAGAAAAAACGGCCATGCAGGATATATTGTA 778
Query 779 GCATGATCGGGTCAACGGATGAAGATGTTTTGCTTCACGAAGAACTCGAGGGCAATGTTC 838
||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 779 GCACGATCGGGTCAACGGATGAAGATGTTTTGCTTCACGAAGAATTCGAGGGCAATGTTC 838
Query 839 ATGTTAACATAAGACATACAAAAGATTTCCACTTTGTAACTGTAAATACATTCTCTACTA 898
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 839 ACGTTAACATAAGACATACAAAAGATTTCCACTTTGTAACTGTAAATACATTCTCTACTA 898
Query 899 CGTTTTCAAAGGTCTTTCTGATAAATGCAGCTGACCCATTTTCTGGTTTGGCATTGGTTT 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 899 CGTTTTCAAAGGTCTTTCTGATAAATGCAGCTGACCCATTTTCTGGTTTGGCATTGGTTT 958
Query 959 GGGAACACAATGCTCCAGCCCACTGCATAATCGAGCATCATCAGGGATTCCTCTACTTAT 1018
|||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct 959 GGGAACACAATGCTCCAGCCCACTGCATAATCGAGCATCATCAGGGATTCCTGTATTTAT 1018
Query 1019 TTACAGATGCTTCCAATGACGGTGGAACACTCGACCATCATTATCTTCTTCGAAGTCCTG 1078
||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct 1019 TTACAAATGCTTCCAATGACGGTGGAACAGTCGACCATCATTATCTTCTCCGAAGTCCTG 1078
Query 1079 TTCACTTCTCTTCCAGTCAAAGGATCTGGGAGACAGTTTTTATCGACAACCCTGAATTAA 1138
|||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||
Sbjct 1079 TTCACTTCTCTTCCTGTCAAAGGATCTGGGAGACAGTTTTTATCAACGACCCTGAATTAA 1138
Query 1139 TCATAGAGGATGTTGATTTCTGCAAAACACATCTATCCCTCATTGTGAAGGAAATGCAGA 1198
||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct 1139 TCATAGAGGATGTTGATTTCTGCAAAAAACATCTATCCCTTATTGTGAAGGAAATGCAGA 1198
Query 1199 GCTTTAAAATTTGTGTGGTTGATCTACCTCTAAAGACAGAGCGGGTACCTATCCATCTGA 1258
||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||
Sbjct 1199 GCTTTAAAATTTGTGTGGTTGATCTACCTCTTAAGACAAAGCGGGTACCTGTCCATCTGA 1258
Query 1259 GAGATATTAAACCTCGTTATCTTCCTCTTCCGAAGCACGTTTCCCAAATCTTTCCTGGCA 1318
||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||
Sbjct 1259 GAGATATTAAACCTCGTTATCTTCCTCTTCCAAAGCATGTTTCTCAAATCTTTCCTGGCA 1318
Query 1319 CAAACTACGACTTTAATTCTCCAACAATGCGGTTTACAATTTCTTCTCTTGTGATGCCTG 1378
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1319 CAAACTACGACTTCAATTCTCCAACAATGCGGTTTACAATTTCTTCTCTGGTGATGCCTG 1378
Query 1379 ATGCAGTGGTTGATTACGATCTATTAAATGGAAAATGGAATATAGTACAGCAGCAAAACA 1438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1379 ATGCAGTGGTTGATTACGATCTATTAAATGGAAAATGGAATATAGTACAGCAGCAAAACA 1438
Query 1439 TGCTTCACGAAAGAACACGGGTTTTATACGGCACTGCAAACTCCACCGAGAGCCCTAATA 1498
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1439 TGCTTCACGAAAGAACACGGGTTTTATATGGCACTGCAAACTCCACCGAGAGCCCTAATA 1498
Query 1499 TACCCTCAGGCACCAGAACTGTCAGTTTTGATACTGAGGATACTACTGCCAACAATGACA 1558
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 1499 TACCCTCAGGCACCAGAACTGTCAGTTTTGATACTGAGGATACTACTGCCGAGAATGACA 1558
Query 1559 ACTTGTGGAATGACTTGGCCGAGTTTTACGCCTGTGATTACCATGAAGTCTCTTCTCATG 1618
||||||||||||||||| | ||||||||||| ||||||||||||||||| ||||||||||
Sbjct 1559 ACTTGTGGAATGACTTGACTGAGTTTTACGCTTGTGATTACCATGAAGTATCTTCTCATG 1618
Query 1619 ATGGAGCCATGGTTCCATTAAGTATTGTTTACTCAAGAGCTCAGAAAGAGGAAAATCGAA 1678
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct 1619 ATGGAGCCATGGTTCCATTAAGTATTGTTTACTCAAGAGCTCAGAAAGAGGAGAATCAAA 1678
Query 1679 AACCTGGTCTTCTTCATGTTCATGGTGCTTATGGTGAAATGCTTGATAAAAGATGGCGTA 1738
|||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct 1679 AACCTGGTCTACTTCATGTTCATGGTGCTTACGGTGAAATGCTTGATAAGAGATGGCGTA 1738
Query 1739 GTGAACTTAAAAGCCTCCTTGATCGTGGCTGGGTACTTGCATATGCAGACGTTAGAGGTG 1798
||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 1739 GTGAACTTAAAAGCCTCCTAGATCGTGGCTGGGTACTCGCATATGCAGACGTTAGAGGTG 1798
Query 1799 GAGGAGGGAAAGGAAAGAAGTGGCACCAAGACGGAAGGGGCGCGAAGAAACTTAACTCCA 1858
|||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct 1799 GAGGTGGGAAAGGAAAGAAGTGGCATCAAGACGGAAGAGGCGCGAAGAAACTTAACTCCA 1858
Query 1859 TCAAAGATTACATTCAATGTGCCAAGTTCCTTGTTGAGAACAATATAGTAGAAGAAAACA 1918
| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1859 TTAAAGATTACATTCAATGTGCCAAGTACCTTGTTGAGAACAATATAGTAGAAGAAAACA 1918
Query 1919 AGCTTGCTGGTTGGGGATACAGTGCAGGAGGACTCATTGTTGCTTCAGCTATCAATCATT 1978
||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct 1919 AGCTTGCTGGTTGGGGATACAGTGCTGGAGGACTCGTTGTTGCTTCAGCTATCAATCATT 1978
Query 1979 GCCCTGAACTCTTCCAAGCTGCGGTTCTAAAGGTTCCTTTTCTTGATCCAACTCATACTC 2038
|||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1979 GCCCCGATCTCTTCCAAGCTGCGGTTCTAAAGGTTCCTTTTCTTGATCCAACTCATACTC 2038
Query 2039 TAATATATCCAATACTACCATTAACGGCAGAGGATTACGAAGAGTTTGGATATCCAGGAG 2098
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2039 TAATATATCCAATACTACCATTAACGGCAGAAGATTACGAAGAGTTTGGATATCCAGGAG 2098
Query 2099 ATATCGATGATTTTCACGCCATACGTGAATACTCACCTTATGACAACATTCCTAAAGATG 2158
||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct 2099 ATATCAATGATTTTCACGCTATACGTGAATACTCACCTTATGACAACATTCCTAAGGATG 2158
Query 2159 TTCTCTATCCAGCTGTTTTAGTCACTTCCTCATTCAATACTCGATTTGGTGTATGGGAAG 2218
|||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct 2159 TTCTTTATCCAGCTGTTTTAGTCACTTCCTCATTCAATACTAGATTTGGTGTTTGGGAAG 2218
Query 2219 CTGCAAAATGGGTTGCAAGAGTCCGTGACAATACCTTTCA-TGACCC-GACAC-ACCCAG 2275
|||| |||||||||||||||||||||||||||||||| || |||||| || || ||| |
Sbjct 2219 CTGCGAAATGGGTTGCAAGAGTCCGTGACAATACCTT-CAATGACCCTGA-ACGACCG-G 2275
Query 2276 TCTTACTCAATTTGACTACTGACATTGTCGAAGAAAACCGGTTCTTACAGACTAAGGAAT 2335
|||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2276 TCTTACTCAACTTGACGACTGACATTGTTGAAGAAAACCGGTTCTTACAGACTAAGGAAT 2335
Query 2336 CTGCACTAGAAATCGCATTTCTCATAAATATGATGGAATCTTGA 2379
||||| |||||||||||||||||||||| |||||||||||||||
Sbjct 2336 CTGCATTAGAAATCGCATTTCTCATAAAGATGATGGAATCTTGA 2379
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 118121882385
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5