BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg918513
Length=2109
Score E
Sequences producing significant alignments: (Bits) Value
AT5G66620.1 | Symbols: DAR6 | DA1-related protein 6 | chr5:2658... 843 0.0
AT5G66630.1 | Symbols: DAR5 | DA1-related protein 5 | chr5:2659... 538 8e-152
AT5G66610.2 | Symbols: DAR7 | DA1-related protein 7 | chr5:2658... 372 9e-102
AT5G17890.1 | Symbols: CHS3, DAR4 | DA1-related protein 4 | chr... 248 2e-64
> AT5G66620.1 | Symbols: DAR6 | DA1-related protein 6 | chr5:26588585-26592006
FORWARD LENGTH=1935
Length=1935
Score = 843 bits (456), Expect = 0.0
Identities = 698/808 (86%), Gaps = 44/808 (5%)
Strand=Plus/Plus
Query 357 TGAAGCTGAACAGCTTGATTTGGCCATTCAAGAATCCTCTCGTCTTCTTCAAGAGGAGGA 416
||||||||||||||||||||||||||||||||||| | | || || ||||||||||||
Sbjct 192 TGAAGCTGAACAGCTTGATTTGGCCATTCAAGAAT--T-T--TC-TCGTCAAGAGGAGGA 245
Query 417 AGAGGAAAGAAGGCGCACCAGAGAGTTAG-AAACTGATGCTCAGATAGCAAATGCTCTTC 475
|||||||||||||||||||||||||||| |||| ||||| ||||||||||||| |||||
Sbjct 246 GGAGGAAAGAAGGCGCACCAGAGAGTTAGAAAAC-GATGCGCAGATAGCAAATGTTCTTC 304
Query 476 AAGACGAGGAAAGAGAAAGGCTGATCAATAAGAAAACTGCATTGGAAGACGAAGAAAACG 535
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 305 AACACGAGGAAAGAGAAAGGCTGATCAATAAGAAAACTGCATTGGAAGACGAAGAAGACG 364
Query 536 AGCAGCTTGCCAAGACTCTT-GAGGAGAGTTTAAAGGAGAACAGCAGAAGAAAACTGTTT 594
||| |||||| | |||| || |||||||||||||||||||||| |||||||||| |||||
Sbjct 365 AGCTGCTTGCTAGGACT-TTAGAGGAGAGTTTAAAGGAGAACAACAGAAGAAAAATGTTT 423
Query 595 GAAGAACAAGTGAAGAAGGATGAACAGCTTGCTCTGATTGTTCAGGAGAGTCTGAACATG 654
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 424 GAAGAACAAGTGAACAAGGATGAACAGCTTGCTCTGATTGTTCAGGAGAGTCTGAACATG 483
Query 655 GAAGAGTATCCTACTCAAATTGAAGAATATAAAAGTATTTCTCCTAGAGCTCCGTCGGAT 714
||||||||||||| || | ||||||||||||||||||| |||| ||||||||||| ||||
Sbjct 484 GAAGAGTATCCTATTCGACTTGAAGAATATAAAAGTATATCTCGTAGAGCTCCGTTGGAT 543
Query 715 GTAGATAAGCAGTTTAATAAGGCTGTTAAGGATAGTTTAAAGGACAAAGGCAAAAGAAAG 774
|||||| |||||||| ||||||||||||||| ||||| ||| ||||||| ||| |||||
Sbjct 544 GTAGATGAGCAGTTTGCTAAGGCTGTTAAGGAGAGTTTGAAGAACAAAGGTAAAGGAAAG 603
Query 775 CAATTTGAAGACGAACGAGTGCAGAATGATAAACAGCATGCTCTGAT-G----G-----T 824
||||||||||| |||| |||| |||| ||| | |||| |||| |||| | | |
Sbjct 604 CAATTTGAAGATGAACAAGTGAAGAAGGATGAGCAGCTTGCTTTGATTGTTCAGGAGAGT 663
Query 825 -T---CA-GGTAGAGTCTCCTCCTCGACTTGAAGAAAATAACAACATTTCCACTAGAGCT 879
| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 664 CTAAACATGGTAGAGTCTCCTCCTCGACTTGAAGAAAATAACAACATTTCCACTAGAGCT 723
Query 880 CCTGTGGATGAAGATGTA-CAGC--G----GG-T-TTGG-GAGAGTTTCAAGAGGAATGG 929
|||||||||||||||| | |||| | || | ||| |||||||| ||| |||| ||
Sbjct 724 CCTGTGGATGAAGATG-AGCAGCTTGCAAAGGCTGTTGAAGAGAGTTTGAAGGGGAAGGG 782
Query 930 TCAAATAGAGCAATCCAAAGATGAGGTGGAAGAAGATGGAAAGCTCCCA-ATGGTGAATC 988
||||||| ||||||| |||||||||||||||| |||||||| ||||| | | | ||||||
Sbjct 783 TCAAATAAAGCAATCAAAAGATGAGGTGGAAGGAGATGGAATGCTCCTAGA-GTTGAATC 841
Query 989 CCCCTCCTAGCGTGCGTGGTGGTTGCAACTCGGTGATCGAGCATGGAAGATCTGTGAATG 1048
| ||||||||| || ||||||||||||||| | | | || |||||| |||||||||||
Sbjct 842 CTCCTCCTAGCTTGTGTGGTGGTTGCAACTTTGCGGTTGAACATGGAGGATCTGTGAATA 901
Query 1049 TCTCGGATGCTCTTTTGCATCCTGAATGTTTA-GTTTGT-GATGCTTG-CAACAAACCAA 1105
||| || || ||||| |||||||| |||||| ||| || | |||||| || ||||||||
Sbjct 902 TCTTGGGTGTTCTTTGGCATCCTGGATGTTTCTGTT-GTCG-TGCTTGTCA-CAAACCAA 958
Query 1106 TTGCTATCCAGGAGATTAAAAACTATGT 1133
|||||||||| || || ||||| ||||
Sbjct 959 TTGCTATCCACGATATCGAAAACCATGT 986
Score = 675 bits (365), Expect = 0.0
Identities = 446/485 (92%), Gaps = 6/485 (1%)
Strand=Plus/Plus
Query 1149 TAAACATCCGTTCTGGGAGGAATTATACTGCCTTGCTCATGAAACTGACGGAAC-CCACA 1207
||| |||||||| ||||||||| |||||||| || ||||||| |||| ||||| || ||
Sbjct 1071 TAATCATCCGTTTTGGGAGGAAAGATACTGCCCTGTTCATGAAGCTGATGGAACTCC-CA 1129
Query 1208 AGTGTTGCAGTTGCGAACGGTTAGAGCCTCAGGGAA-CAAACTTTGTAACGCTTGGTGAT 1266
| || |||||||||||| ||||||||||| |||||| |||||| ||||| ||||| ||||
Sbjct 1130 AATGCTGCAGTTGCGAAAGGTTAGAGCCT-AGGGAATCAAACTATGTAATGCTTGCTGAT 1188
Query 1267 GGTCGATTTCTATGCTTGGAATGTATGGATTCTGCCGTTATGGATTCTGATGAATGCCAG 1326
||||||| |||||| | ||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1189 GGTCGATGGCTATGCCTCGAATGTATGAATTCTGCCGTTATGGATTCTGATGAATGCCAG 1248
Query 1327 CCTCTGCATTTTGACATGCGTGATTTCTTCGAAGGCTTAAACATGAAGATTGAGAAAGAA 1386
||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1249 CCTTTGCACTTTGACATGCGTGATTTCTTCGAAGGCTTAAACATGAAGATTGAGAAAGAA 1308
Query 1387 TTTCCTTTTCTTTTGGTGGAAAAACAAGCGCTGAATAAAGCTGAGAAGGAAGAGAAAATT 1446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1309 TTTCCTTTTCTTTTGGTGGAAAAACAAGCGCTGAATAAAGCTGAGAAGGAAGAGAAAATT 1368
Query 1447 GACTATGAGTATGAGGTGGTCACCAGAGGTATTTGCCTGTCTGAAGCA-CAGACTGTCGA 1505
|||||| ||||||||||||| ||||||||||||||||| ||||||| | |||| ||||||
Sbjct 1369 GACTATCAGTATGAGGTGGTAACCAGAGGTATTTGCCTATCTGAAG-AGCAGATTGTCGA 1427
Query 1506 TAGTGTCTCACAAAGGCCAATCATGGGGCCGAACAACAAGCTAATAGGCATGGCTACAGA 1565
||||||||| ||||||||| ||| |||||| |||||||||||| ||||||||||||||||
Sbjct 1428 TAGTGTCTCCCAAAGGCCAGTCAGGGGGCCAAACAACAAGCTAGTAGGCATGGCTACAGA 1487
Query 1566 ACCTCAAAGGGTAACTCGTGAGTGCGAGGTCACTGCGATTCTCATCCTATATGGACTTCC 1625
| |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1488 ATCTCAAAAGGTAACTCGTGAGTGCGAGGTCACTGCAATTCTCATCCTATATGGACTTCC 1547
Query 1626 TAGGT 1630
|||||
Sbjct 1548 TAGGT 1552
Score = 566 bits (306), Expect = 4e-160
Identities = 358/383 (93%), Gaps = 3/383 (1%)
Strand=Plus/Plus
Query 1726 AGGTTACTAACAGGATATATCTTGGCTCATGAGATGATGCATGCTTATCTTAGACTCAGT 1785
|||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| |
Sbjct 1549 AGGTTACTAACAGGATATATTTTGGCTCACGAGATGATGCATGCTTATCTTAGACTCAAT 1608
Query 1786 GGACATAGGAACCTGAACAACATTTTGGAAGAAGGACTATGCCAAGTGCTAGGTCACATG 1845
|||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||
Sbjct 1609 GGACATAGGAACCTGAACAACATTTTGGAAGAAGGAATATGCCAAGTTCTAGGTCACCTG 1668
Query 1846 TGGTTGGAGTCTCAGACATACGCCACTGCTGATGCCACTGCAGATGCATCATCAGCA--T 1903
|||||||| |||||||||||||||||||||||||| |||||||||||||||||| || |
Sbjct 1669 TGGTTGGATTCTCAGACATACGCCACTGCTGATGCTACTGCAGATGCATCATCATCAGCT 1728
Query 1904 -CTTCTTCTTCCCGCACTCCTCCAGCTGCTAATGCGTCAAAGAAAGGTGAGTGGTCTGAT 1962
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1729 TCTTCTTCTTCCCGCACTCCTCCAGCTGCTAGTGCGTCAAAGAAAGGTGAGTGGTCTGAT 1788
Query 1963 TTCGAGAAGAAACTGGTGGGGTTTTGCAAGAATCAGATAGAGACAGATGATTCACCAGTC 2022
||||| ||||||||||||| ||||||||||||||||||||| ||||| |||||||| |||
Sbjct 1789 TTCGACAAGAAACTGGTGGAGTTTTGCAAGAATCAGATAGAAACAGACGATTCACCGGTC 1848
Query 2023 TACGGTGTCGGATTCAGGACAGTTAACGAGATGGTGAAAAATTCCAGCCTCCAGGATACC 2082
|||||| | |||||||||||||||||||||||||||| ||| |||||||||||||| |||
Sbjct 1849 TACGGTCTTGGATTCAGGACAGTTAACGAGATGGTGACAAACTCCAGCCTCCAGGAAACC 1908
Query 2083 CTCAAAGAGATTCTTCGCCGGAG 2105
|| |||||||||||||||| |||
Sbjct 1909 CTGAAAGAGATTCTTCGCCAGAG 1931
Score = 444 bits (240), Expect = 2e-123
Identities = 287/310 (93%), Gaps = 2/310 (1%)
Strand=Plus/Plus
Query 41 AGGATCGTTTTGATCCAGAAACTAGTCACGTCATACAAGTTTCACAGCATGAAGCTGATA 100
||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||| |
Sbjct 68 AGGATCGTTTTGAAGCAGAAACTATTCACGTCATAGAAGTTTCACAGCATGAAGCTGACA 127
Query 101 TTCA-AAGAGCCAAACAGCTTTCTTTGGCCAATTATGAAGCTGAACAGCTTGATTTGGCC 159
|||| || ||| ||||||| ||||||||||| | ||||||||||| ||||||||||||||
Sbjct 128 TTCAGAA-AGCTAAACAGCGTTCTTTGGCCACTCATGAAGCTGAAAAGCTTGATTTGGCC 186
Query 160 AATCATGAAGCTCAACAGCTTGATTTGGCCATTCAAGAAATCTCTCGTCAAGAGGAGGAA 219
| |||||||||| |||||||||||||||||||||||||| | |||||||||||||||||
Sbjct 187 ACTCATGAAGCTGAACAGCTTGATTTGGCCATTCAAGAATTTTCTCGTCAAGAGGAGGAG 246
Query 220 GAGGAAAGAAGGCGCACCAGAGAGTTAGAAAATGATGCGCAGATAGCAAATGCTCTTCAA 279
|||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct 247 GAGGAAAGAAGGCGCACCAGAGAGTTAGAAAACGATGCGCAGATAGCAAATGTTCTTCAA 306
Query 280 GACGAAGAAAGAGAAAGGCTGATCAATAAGAAAACTGCATTGGAAGACGAAGAAGACGAG 339
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 307 CACGAGGAAAGAGAAAGGCTGATCAATAAGAAAACTGCATTGGAAGACGAAGAAGACGAG 366
Query 340 CAGTTTGCTA 349
| | ||||||
Sbjct 367 CTGCTTGCTA 376
> AT5G66630.1 | Symbols: DAR5 | DA1-related protein 5 | chr5:26592648-26595922
FORWARD LENGTH=2412
Length=2412
Score = 538 bits (291), Expect = 8e-152
Identities = 349/377 (93%), Gaps = 3/377 (1%)
Strand=Plus/Plus
Query 1732 CTAACAGGATATATCTTGGCTCATGAGATGATGCATGCTTATCTTAGACTCAGTGGACAT 1791
||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||
Sbjct 1801 CTAACAGGATATATCTTGGCTCACGAGATGATGCATGCTTGGCTTAGACTCAATGGACAT 1860
Query 1792 AGGAACCTGAACAACATTTTGGAAGAAGGACTATGCCAAGTGCTAGGTCACATGTGGTTG 1851
| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 1861 ATGAACCTGAACAACATTTTGGAAGAAGGAATATGCCAAGTGCTAGGTCACCTGTGGTTG 1920
Query 1852 GAGTCTCAGACATACGCCACTGCTGATGCCACTGCAGATGCATCATCAGCATCTTCTTCT 1911
||||||||||||||||||||||||||| | |||||||||||| ||||||| |||||||||
Sbjct 1921 GAGTCTCAGACATACGCCACTGCTGATACTACTGCAGATGCAGCATCAGCTTCTTCTTCT 1980
Query 1912 TC--CC-GCACTCCTCCAGCTGCTAATGCGTCAAAGAAAGGTGAGTGGTCTGATTTCGAG 1968
|| || |||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct 1981 TCTTCCCGCACTCCTCCAGCTGCTAGTGCCTCAAAGAAAGGTGAGTGGTCTGATTTCGAC 2040
Query 1969 AAGAAACTGGTGGGGTTTTGCAAGAATCAGATAGAGACAGATGATTCACCAGTCTACGGT 2028
||||||||||||| ||||||||||||||||||||| ||||| || ||||| |||||||||
Sbjct 2041 AAGAAACTGGTGGAGTTTTGCAAGAATCAGATAGAAACAGACGAATCACCGGTCTACGGT 2100
Query 2029 GTCGGATTCAGGACAGTTAACGAGATGGTGAAAAATTCCAGCCTCCAGGATACCCTCAAA 2088
| |||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||
Sbjct 2101 CTTGGATTCAGGACAGTTAACGAGATGGTGACAAACTCCAGCCTCCAGGAAACCCTCAAG 2160
Query 2089 GAGATTCTTCGCCGGAG 2105
|||||||||||||||||
Sbjct 2161 GAGATTCTTCGCCGGAG 2177
Score = 377 bits (204), Expect = 2e-103
Identities = 397/486 (82%), Gaps = 29/486 (6%)
Strand=Plus/Plus
Query 1153 CATCCGTTCTGGGAGGAATTATACTGCCTTGCTCATGAAACTGACGGAAC-CCACAAGTG 1211
|||||||| ||||||||| |||||||| || ||||||| |||| ||||| || ||| ||
Sbjct 1330 CATCCGTTTTGGGAGGAAAGATACTGCCCTGTTCATGAAGCTGATGGAACTCC-CAAATG 1388
Query 1212 TTGCAGTTGCGAACGGTTAGAGCCTCA-GGGAACAAACTTTGTAACGCTTGGTGATGGTC 1270
|||||||||||| ||||||||||| | ||||||||| | || || |||| |||||||||
Sbjct 1389 CTGCAGTTGCGAAAGGTTAGAGCCT-AGGGGAACAAAGTATGGAAAGCTTAGTGATGGTC 1447
Query 1271 GATTTCTATGCTTGGAATGTATGGATTCTGCCGTTATGGATTCTGATGAATGCCAGCCTC 1330
||| |||||| | |||||| ||| | ||| |||||||||||||||||||||||||
Sbjct 1448 GATGGCTATGCCTAGAATGT-GGGA-AAT-CCGCTATGGATTCTGATGAATGCCAGCCTT 1504
Query 1331 TGCATTTTGACATGCGTGATTTCTTCGAAGGCTTAAACATGAAGATTGAGAAAGAATTTC 1390
|| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1505 TGTACTTTGACATGCGTGATTTCTTCGAAAGCTTAAACATGAAGATTGAGAAAGAATTTC 1564
Query 1391 CTTTTCTTTTGGTG-GAAAAACAAGC-GCTGAATAAAGCTGAGAAGGAAGAGAAAATTGA 1448
|||| |||||||| | ||| || | ||| |||||| | | |||||||||||||||
Sbjct 1565 CTTTAATTTTGGTGCGGAAAG-AA-CTGCTCAATAAA----A-A-GGAAGAGAAAATTGA 1616
Query 1449 CTATGAGTATGAGGTGGTCACCAGAGGT-ATTTGCCTGTCTGAAGCACA-GA-C-TGTCG 1504
| || | ||||||||| | | ||||| | ||| || |||||||| || | || | || |
Sbjct 1617 CAATCATTATGAGGTGTTAATCAGAGCTTATT-GCATGTCTGAA-CAGAAGATCATGAC- 1673
Query 1505 ATAGTGTCTCACAA-AGGCCAATCATGGGGCCGAACAA-CAAGCTAATAGGCATGGCTAC 1562
||| ||||||| | || |||| | ||| | |||||| || ||| |||| ||||| |||
Sbjct 1674 ATA-TGTCTCAGAGGAG-CCAAGGACGGGTCAGAACAAGCA-GCTTATAGACATGGATAC 1730
Query 1563 AGAACCTCAAAGGGTAACTCGTGAGTGCGAGGTCACTGCGATTCTCATCCTATATGGACT 1622
||||||||| |||| || ||||||| |||||||||| ||||||||||||||||||||
Sbjct 1731 GGAACCTCAAGGGGTTGTTCATGAGTGCAAGGTCACTGCAATTCTCATCCTATATGGACT 1790
Query 1623 TCCTAG 1628
||||||
Sbjct 1791 TCCTAG 1796
> AT5G66610.2 | Symbols: DAR7 | DA1-related protein 7 | chr5:26584774-26587782
FORWARD LENGTH=1900
Length=1900
Score = 372 bits (201), Expect = 9e-102
Identities = 397/490 (81%), Gaps = 20/490 (4%)
Strand=Plus/Plus
Query 1151 AACATCCGTTCTGGGAGGAATTA-TACTG-CCTTGCTCATGAAACTGACGGAAC-CCACA 1207
||||||| |||||| ||||| | ||||| |||| ||||||| ||| ||||| || ||
Sbjct 927 AACATCCCTTCTGGAAGGAA-AAGTACTGCCCTT-TTCATGAAGTTGATGGAACTCC-CA 983
Query 1208 AGTGTTGCAGTTGCGAACGGTTAGAG-CCTCAGGGAACAAACTTTGTAACGCTTGGTGAT 1266
||||||||||||| ||| | |||||| ||| |||||| || | ||||| ||||| |||
Sbjct 984 AGTGTTGCAGTTGTGAAAGATTAGAGCCCT-GGGGAACGAAGTATGTAATGCTTGCTGAC 1042
Query 1267 GGTCGATTTCTATGCTTGGAATGTATGG-ATTCTGCCGTTATGGATTCTGATGAATGCCA 1325
||| | |||||| | ||||||||| || | || ||||||||| || |||| |||||
Sbjct 1043 AATCGGTGGCTATGCGTAAAATGTATGGAATGC-GCGGTTATGGATACTTATGAGTGCCA 1101
Query 1326 GCC-TCTGCATTTTGACATGCGTGATTTCTTC-GAAGGCTTAAACATGAAGATTGAGAAA 1383
|| | |||| ||||| || ||||| |||||| ||| |||||||||||||| ||||||||
Sbjct 1102 ACCAT-TGCACTTTGAAATCCGTGAATTCTTCGGAA-GCTTAAACATGAAGGTTGAGAAA 1159
Query 1384 GAATTTCCTTTTCTTTTGGTGGAAAAACAAGCGCTGAATAAAGCTGAGAAGGAAGAGAAA 1443
||||| ||| ||||||||||||| ||| |||||||||| ||||||||| | |||| |||
Sbjct 1160 GAATTCCCTCTTCTTTTGGTGGAGAAAGAAGCGCTGAAAAAAGCTGAGGCGCAAGA-AAA 1218
Query 1444 -ATTGACTATGAGTATGAGGTGGTCACCAGAGGTATTTGCCTGTCTGAAGCACAGACTGT 1502
|| ||| || || ||| ||| || ||||||||||||||||||||||||| |||| |||
Sbjct 1219 GATCGACAATCAGCATGGGGTTGTAACCAGAGGTATTTGCCTGTCTGAAGGGCAGATTGT 1278
Query 1503 CGATAGTGTC-TCACAAAGGCCAATCATGGGGCCGAACAACAAGCTAATAGGCATGGCTA 1561
| |||||||| | | ||| ||||| ||||||||| ||| | ||||| || || ||| ||
Sbjct 1279 CAATAGTGTCTTTA-AAAAGCCAACCATGGGGCCAAACGGCGAGCTAGTAAGCTTGGGTA 1337
Query 1562 CAGAACCTCAAAGGGTAACTCGT-GAGTGCGAGGTCACTGCGATTCTCATCCTATATGGA 1620
|||||||||||| ||| | || || || ||||||||||| ||||||||||||||||||
Sbjct 1338 CAGAACCTCAAAAGGTTGTTGGTGGA-TGTGAGGTCACTGCAATTCTCATCCTATATGGA 1396
Query 1621 CTTCCTAGGT 1630
||||||||||
Sbjct 1397 CTTCCTAGGT 1406
Score = 93.5 bits (50), Expect = 8e-18
Identities = 58/62 (94%), Gaps = 0/62 (0%)
Strand=Plus/Plus
Query 1726 AGGTTACTAACAGGATATATCTTGGCTCATGAGATGATGCATGCTTATCTTAGACTCAGT 1785
||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct 1403 AGGTTACTAACTGGATATATCTTGGCTCATGAGATGATGCATGCTTGGCTTAGACTCAAT 1462
Query 1786 GG 1787
||
Sbjct 1463 GG 1464
> AT5G17890.1 | Symbols: CHS3, DAR4 | DA1-related protein 4 | chr5:5916970-5923355
FORWARD LENGTH=5082
Length=5082
Score = 248 bits (134), Expect = 2e-64
Identities = 302/380 (79%), Gaps = 24/380 (6%)
Strand=Plus/Plus
Query 1726 AGGTTACTAACAGGATATATCTTGGCTCATGAGATGATGCATGCTTATCTTAGACTCAGT 1785
|||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |
Sbjct 4480 AGGTTACTCACAGGATATATCTTGGCCCATGAGATGATGCATGCTTATCTTAGACTCAAT 4539
Query 1786 GGACATAGGAACCTGAACAACATT-TTGGAAGAAGGACTATGCCAAGTGCTAGG-TCACA 1843
|| | ||||| || |||| || ||| |||||||| ||||||||||| |||| | |||
Sbjct 4540 GGTTACAGGAATCTTAACATGGTTCTTG-AAGAAGGATTATGCCAAGTGTTAGGCT-ACA 4597
Query 1844 TGTGGTTGGAGTCTCAGACATACGCCACTGCTGA-TGCCACTGCAGATGCATCATCAGCA 1902
|||||||||||| ||||||||||| || | | |||||| | | || || ||
Sbjct 4598 TGTGGTTGGAGTGTCAGACATACGTTTTTGAT-ACTGCCACA--ATA-GCTTCTTCT--- 4650
Query 1903 TCTTCTTCTTCCCGCACTCCTCCAGCTGCTAATG-CGTCAAAGAAAGGTGAGTGGTCTGA 1961
|||||||||||||||||||||| | || | || | |||||||||| ||| |||||
Sbjct 4651 TCTTCTTCTTCCCGCACTCCTCTATCTAC-AACCACATCAAAGAAAGTTGACCCATCTGA 4709
Query 1962 TTTCGAGAAGAAACTGGTGGGGTTT-TGCAAGAATCAGATAGAGACAGATGATTCACCAG 2020
||| ||||||| ||||| ||| |||||| |||||||||| |||||||| ||||||
Sbjct 4710 TTTTGAGAAGAGGCTGGTAAA-TTTCTGCAAGCATCAGATAGAAACAGATGAGTCACCAT 4768
Query 2021 TCTACGGTGTCGGATTCAGGACAGTTAACGA---GATGG--TGAAA-AATTC-CAGCCTC 2073
||| ||||| ||| ||||||| ||||||| | ||||| | ||| ||| | ||||||
Sbjct 4769 TCTTCGGTGACGGGTTCAGGAAAGTTAACAAAATGATGGCCTCAAATAAT-CACAGCCTT 4827
Query 2074 CAGGATACCCTCAAAGAGAT 2093
|||||||||| ||||||||
Sbjct 4828 AAGGATACCCTGAAAGAGAT 4847
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 104567735235
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5