BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg918550 Length=300 Score E Sequences producing significant alignments: (Bits) Value AT5G66260.1 | Symbols: | SAUR-like auxin-responsive protein fa... 505 1e-142 > AT5G66260.1 | Symbols: | SAUR-like auxin-responsive protein family | chr5:26471269-26471658 FORWARD LENGTH=300 Length=300 Score = 505 bits (273), Expect = 1e-142 Identities = 291/300 (97%), Gaps = 0/300 (0%) Strand=Plus/Plus Query 1 ATGGGAGTAGAAAGGGGAAGTGGTAAGGCTCTGAAGAAGATGTTAAAGAGATGTTCGAGT 60 |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct 1 ATGGGAGTAGAAAGGGGAAGTGGTAAGGGTCTGAAGCAGATGTTAAAGAGATGTTCGAGT 60 Query 61 TTGGGGAAGAAGAGCAACGTCGACGTTAACTTTAACGGCGTCCCCAAAGGTCACTTCGTC 120 || ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct 61 TTAGGGAAGAAGAGCAGCGTCGACGTTAACTTCAACGGCGTCCCCAAAGGTCACTTCGTC 120 Query 121 GTTTACGTTGGTCACTCTAGATCCCGACACGTCATCCCCATCTCCTTCCTCACGCACCCC 180 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 121 GTCTACGTTGGTCACTCTAGATCCCGACATGTCATCCCCATCTCCTTCCTCACGCACCCC 180 Query 181 ATCTTCCAGATGTTGCTGCAACAGTCTGAGGAAGAGTTTGGGTTCTTTCAAGACAATGGC 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 ATCTTCCAGATGTTGCTGCAACAGTCTGAGGAAGAGTTTGGGTTCTTTCAAGACAATGGC 240 Query 241 CTAACCATCCCTTGTGATGAACACTTCTTTCGATCTCTCATTTCCTCCGTTAATCCTTAA 300 ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct 241 CTAACCATCCCTTGTGATGAACACTTCTTTCGAGCTCTCATTTCCTCCATTAATCCTTAA 300 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 13873898724 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5