BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg918607
Length=1920
Score E
Sequences producing significant alignments: (Bits) Value
AT3G11670.1 | Symbols: DGD1 | UDP-Glycosyltransferase superfami... 3112 0.0
> AT3G11670.1 | Symbols: DGD1 | UDP-Glycosyltransferase superfamily
protein | chr3:3680893-3684558 REVERSE LENGTH=2687
Length=2687
Score = 3112 bits (1685), Expect = 0.0
Identities = 1841/1919 (96%), Gaps = 0/1919 (0%)
Strand=Plus/Plus
Query 1 ATGGTAAAAGAAACTCTAATTCCTCCGTCTTCTACGTCAATGGCGACCGGTACGGCGACG 60
|||||||| |||||||||||||||||||| |||||||||||| ||||||| || | |
Sbjct 64 ATGGTAAAGGAAACTCTAATTCCTCCGTCATCTACGTCAATGACGACCGGAACATCTTCT 123
Query 61 TCTTCGTCTCTTTCAATGACGTTGTCATCAACAAACGCGTTATCGTTTTTGTCGAAAGGT 120
||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct 124 TCTTCGTCTCTTTCAATGACGTTATCCTCAACAAACGCGTTATCGTTTTTGTCGAAAGGA 183
Query 121 TGGAGAGAGGTATGGGATTCAGCGGATACGGATTTGCAGTTGATGCGAGACAGAGCTAAC 180
||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||
Sbjct 184 TGGAGAGAGGTATGGGATTCAGCAGATGCGGATTTGCAGCTGATGCGAGACAGAGCTAAC 243
Query 181 TCCGTTAAGAATCTAGCATCGACGTTCGACAGAGAGATCGAGAATTTCCTCAATAATTCG 240
|| ||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct 244 TCTGTTAAGAATCTAGCATCAACGTTCGATAGAGAGATCGAGAATTTCCTCAATAACTCG 303
Query 241 GCCAGGTCTGCGTTTCCCGTCGGGTCACCATCGGCGTCTTCTTTCTCAAGTGAAATTGGT 300
|| ||||||||||||||||| || |||||||||||||| |||||||||| ||||||||||
Sbjct 304 GCGAGGTCTGCGTTTCCCGTTGGTTCACCATCGGCGTCGTCTTTCTCAAATGAAATTGGT 363
Query 301 ATCATGAAGAAGCTTCAGCCGAAGATTTCGGAGTTTCGTAGGGTTTATTCGGCGCCGGAG 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 364 ATCATGAAGAAGCTTCAGCCGAAGATTTCGGAGTTTCGTAGGGTTTATTCGGCGCCGGAG 423
Query 361 ATTAGTCGTAAGGTTATGGAGAGATGGGGACCAGCGAGAGCGAAGCTGGGAATGGATCTA 420
|||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct 424 ATTAGTCGCAAGGTTATGGAGAGATGGGGACCTGCGAGAGCGAAGCTTGGAATGGATCTA 483
Query 421 TCGGCGATTAAGAAGGCGATTGTGTCTGAGATGGAATTGGATGAGCGTCAGGGAGTTTTA 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 484 TCGGCGATTAAGAAGGCGATTGTGTCTGAGATGGAATTGGATGAGCGTCAGGGAGTTTTG 543
Query 481 GAGATGGGTAGATTGAGGAGACGGCGTAATAGTGACAGGGTTAGGTTTACGGAGTTTTTC 540
|||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 544 GAGATGAGTAGATTGAGGAGACGGCGTAATAGTGATAGGGTTAGGTTTACGGAGTTTTTC 603
Query 541 GCGGAGGCTGAGAGAGATGGAGAAGGTAATTTCGGTGATTGGGAACCGATTAGGTCTTTG 600
||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct 604 GCGGAGGCTGAGAGAGATGGAGAAGCTTATTTCGGTGATTGGGAACCGATTAGGTCTTTG 663
Query 601 AAGACTAGATTTAAAGAGTTTGAGAAACGAAACTCGTTAGAAATATTGAGTGGATTCAAG 660
|||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 664 AAGAGTAGATTTAAAGAGTTTGAGAAACGAAGCTCGTTAGAAATATTGAGTGGATTCAAG 723
Query 661 AACAGCGAATTTGTGGAGAAGCTCAAAACCAGCTTTAAATCAAGTTACAAAGAAACTGAT 720
||||| |||||||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 724 AACAGTGAATTTGTTGAGAAGCTCAAAACCAGCTTTAAATCAATTTACAAAGAAACTGAT 783
Query 721 GAGGCTAAGGATGTCCCTCCATTGGATGTACCTGAACTTTTGGCCTGTTTGGTTAGACAG 780
|||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||
Sbjct 784 GAGGCTAAGGATGTCCCTCCGTTGGATGTACCTGAACTGTTGGCATGTTTGGTTAGACAA 843
Query 781 TCTGAACCTTTTCTTGATCAGATTGGTGTTAGAAAGGATATGTGCGACCGAATAGTAGAA 840
|||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct 844 TCTGAACCTTTTCTTGATCAGATTGGTGTTAGAAAGGATACATGTGACCGAATAGTAGAA 903
Query 841 AGCCTTTGCAAATGCAAGAGCCAACACCTTTGGCGTCTGCCATCTGCACAAGCATCCGAT 900
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 904 AGCCTTTGCAAATGCAAGAGCCAACAACTTTGGCGTCTGCCATCTGCACAAGCATCCGAT 963
Query 901 TTAATTGAAAATGATAATCATGGAGTTGATTTGGATATGAGGATAGCCAGTGTTCTTCAA 960
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 964 TTAATTGAAAATGATAACCATGGAGTTGATTTGGATATGAGGATAGCCAGTGTTCTTCAA 1023
Query 961 AGCACAGGACACCATTATGATGGTGGCTTTTGGACTGATTTTGTGAAGCCTGAGACATCA 1020
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 1024 AGCACAGGACACCATTATGATGGTGGGTTTTGGACTGATTTTGTGAAGCCTGAGACACCG 1083
Query 1021 GAAAATAAAAGGCATGTGGCAATTGTTACAACAGCTAGTCTCCCTTGGATGACCGGAACA 1080
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1084 GAAAACAAAAGGCATGTGGCAATTGTTACAACAGCTAGTCTTCCTTGGATGACCGGAACA 1143
Query 1081 GCTGTAAATCCACTATTCAGAGCGGCGTATTTGGCAAAATCTGCAAAACAGAGTGTTACA 1140
||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1144 GCTGTAAATCCGCTATTCAGAGCGGCGTATTTGGCAAAAGCTGCAAAACAGAGTGTTACT 1203
Query 1141 CTTGTAGTTCCTTGGCTCTGCGAATCTGATCAAGAACTAGTTTATCCAAACAATCTCACC 1200
|| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1204 CTCGTGGTTCCTTGGCTCTGCGAATCTGATCAAGAACTAGTGTATCCAAACAATCTCACC 1263
Query 1201 TTTAGTTCACCTGAAGAACAAGAGAGCTATATACGTAAATGGTTGGAGGAAAGGATTGGT 1260
|| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1264 TTCAGCTCACCTGAAGAACAAGAGAGTTATATACGTAAATGGTTGGAGGAAAGGATTGGT 1323
Query 1261 TTCAAGGCTGATTTTAAAATCTCCTTTTACCCAGGAAAGTTTTCAAAAGAAAGGCGTAGC 1320
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1324 TTCAAGGCTGATTTTAAAATCTCCTTTTACCCAGGAAAGTTTTCAAAAGAAAGGCGCAGC 1383
Query 1321 ATATTTCCTGCTGGTGACACTTCTCAATTTATATCGTCAAAAGATGCTGACATTGCTATA 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1384 ATATTTCCTGCTGGTGACACTTCTCAATTTATATCGTCAAAAGATGCTGACATTGCTATA 1443
Query 1381 CTTGAAGAACCTGAGCATCTCAACTGGTACCATCACGGCAAGCGTTGGACCGATAAATTC 1440
|||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||
Sbjct 1444 CTTGAAGAACCTGAACATCTCAACTGGTATTATCACGGCAAGCGTTGGACTGATAAATTC 1503
Query 1441 AACCATGTTGTTGGAATTGTCCACACAAACTACTTAGAGTACATCAAGAGGGAGAAGAAT 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1504 AACCATGTTGTTGGAATTGTCCACACAAACTACTTAGAGTACATCAAGAGGGAGAAGAAT 1563
Query 1501 GGAGCTCTTCAAGCATTTTTTGTGAATCATGTAAACAATTGGGTCACACGAGCATATTGT 1560
|||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct 1564 GGAGCTCTTCAAGCATTTTTTGTGAACCATGTAAACAATTGGGTCACACGAGCGTATTGT 1623
Query 1561 GACAAGGTTCTTCGTCTCTCTGGGGCAACACAAGATTTACCAAAATCTGTTGTATGCAAT 1620
|||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct 1624 GACAAGGTTCTTCGCCTCTCTGCGGCAACACAAGATTTACCAAAGTCTGTTGTATGCAAT 1683
Query 1621 GTCCACGGTGTCAATCCCAAGTTCCTTATGATTGGGGGGAAAATTGCTGAAGAGAGATCC 1680
||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1684 GTCCATGGTGTCAATCCCAAGTTCCTTATGATTGGGGAGAAAATTGCTGAAGAGAGATCC 1743
Query 1681 CGTGGTGAACAAGCTTTCTCCAAAGGTGCATACTTCTTAGGAAAAATGGTGTGGGCTAAA 1740
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1744 CGTGGTGAACAAGCTTTCTCAAAAGGTGCATACTTCTTAGGAAAAATGGTGTGGGCTAAA 1803
Query 1741 GGATACAGAGAACTAATAGATCTGATGGCTAAGCACAAAAGCGAACTTGGGAGCTTCAAT 1800
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1804 GGATACAGAGAACTAATAGATCTGATGGCTAAACACAAAAGCGAACTTGGGAGCTTCAAT 1863
Query 1801 CTAGATGTCTATGGGAACGGTGAAGATGCAGTCGAAGTCCAACGTGCAGCAAAGAAACAT 1860
|||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1864 CTAGATGTATATGGGAACGGTGAAGATGCAGTCGAGGTCCAACGTGCAGCAAAGAAACAT 1923
Query 1861 GACTTAAATCTCAATTTCCTCAAAGGAAGGGACCACGCCGACGATGCTCTTCACAAGTA 1919
||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1924 GACTTGAATCTCAATTTCCTCAAAGGAAGGGACCACGCTGACGATGCTCTTCACAAGTA 1982
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 95079832230
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5