BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg918689
Length=897
Score E
Sequences producing significant alignments: (Bits) Value
AT5G43360.1 | Symbols: PHT3, ATPT4, PHT1;3 | phosphate transpor... 1341 0.0
AT5G43350.1 | Symbols: ATPT1, PHT1;1 | phosphate transporter 1;... 1064 0.0
AT5G43370.1 | Symbols: APT1, PHT2, PHT1;2 | phosphate transport... 987 0.0
> AT5G43360.1 | Symbols: PHT3, ATPT4, PHT1;3 | phosphate transporter
1;3 | chr5:17409524-17411214 FORWARD LENGTH=1566
Length=1566
Score = 1341 bits (726), Expect = 0.0
Identities = 853/912 (94%), Gaps = 18/912 (2%)
Strand=Plus/Plus
Query 1 ATGTTTGGCGCTTTACCCGCGGCTTTGACCTACTACTGGCGTATGAAGATGCCTGAAACT 60
|||||||| ||||||||||| |||||||| ||||| |||||||||||||||||||||||
Sbjct 658 ATGTTTGGTGCTTTACCCGCAGCTTTGACTTACTATTGGCGTATGAAGATGCCTGAAACA 717
Query 61 GCCCGCTACACTGCTTTAGTTGCCAAGAACATTAAGA-AAGCCACA-CAAGACATGTCCA 118
||||| ||||| |||||||||||||||||||| || | |||||||| | |||||||||||
Sbjct 718 GCCCGTTACACCGCTTTAGTTGCCAAGAACATCAA-ACAAGCCACAGC-AGACATGTCCA 775
Query 119 AGGTCTTACAAGTGGATATTGAGGTTGAAG-AA------AGG--G-CG--GAGGACCCCA 166
||||||||||| ||| | ||| |||| | || ||| | || |||||||||
Sbjct 776 AGGTCTTACAAACAGATCTCGAGCTTGAGGAAAGGGTGGAGGATGACGTCAAGGACCCCA 835
Query 167 AACTAAACTATGGCTTGTTCTCCAAGGAATTCCTTAGACGCCATGGGCTTCATCTCCTTG 226
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 836 AAAAAAACTATGGCTTGTTCTCCAAGGAATTCCTTAGACGCCATGGGCTTCATCTCCTTG 895
Query 227 GGACTACCTCCACTTGGTTTTTGCTTGACATCGCCTTCTACAGCCAAAACTTGTTCCAAA 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 896 GGACTACCTCCACTTGGTTTTTGCTTGACATCGCCTTCTACAGCCAAAACTTGTTCCAAA 955
Query 287 AGGATATTTTCTCGGCCATTGGATGGATCCCAAAGGCAGCCACTATGAACGCCATCCATG 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 956 AGGATATTTTCTCGGCCATTGGATGGATCCCAAAGGCAGCCACTATGAACGCCATCCATG 1015
Query 347 AGGTTTTCAAGATTGCTAAGGCTCAGACTCTCATTGCCCTTTGCAGTACAGTCCCAGGTT 406
|||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct 1016 AGGTTTTCAAGATTGCTAGGGCTCAGACTCTCATTGCCCTCTGCAGTACAGTCCCAGGTT 1075
Query 407 ACTGGTTCACGGTTGCTTTTATTGATATCATTGGAAGGTTTGCGATCCAACTAATGGGAT 466
|||||||||| || || |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1076 ACTGGTTCACAGTAGCCTTTATTGATATCATTGGAAGGTTTGCGATCCAACTAATGGGAT 1135
Query 467 TCTTTT-TCATGACGGTCTTTATGTTCGCCATTGCCTTCCCATACAACCACTGGATTTTA 525
| ||| | ||||| || |||||||| || ||||||||||||||||||||||||||||||
Sbjct 1136 T-TTTCATGATGACCGTTTTTATGTTTGCTATTGCCTTCCCATACAACCACTGGATTTTA 1194
Query 526 CCAGATAATCGTATCGGATTCGTGATTATGTACTCACTCACATTTTTCTTCGCCAACTTT 585
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1195 CCAGATAATCGTATCGGATTCGTGGTTATGTACTCACTCACATTTTTCTTCGCCAACTTT 1254
Query 586 GGACCCAATGCAACCACTTTCATTGTCCCAGCTGAAATCTTTCCGGCCAGGCTTAGATCT 645
|||||||||||||| ||||||||||||||||||||||||||||| || ||||| || |||
Sbjct 1255 GGACCCAATGCAACTACTTTCATTGTCCCAGCTGAAATCTTTCCAGCAAGGCTAAGGTCT 1314
Query 646 ACGTGCCATGGAATATCAGCCGCGACAGGTAAGGCTGGAGCTATCGTTGGAGCCTTCGGG 705
||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||
Sbjct 1315 ACGTGCCATGGAATATCAGCCGCAACTGGTAAGGCTGGAGCCATCGTTGGAGCCTTCGGG 1374
Query 706 TTCCTATATGCTGCTCAGCCACAGGATAAGACCAAGACAGACGCAGGATACCCACCGGGC 765
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1375 TTCCTATATGCTGCTCAACCACAGGATAAGACCAAGACAGACGCAGGATACCCACCGGGC 1434
Query 766 ATCGGAGTCAAGAACTCACTGATCATGCTTGGTGTCATTAACTTTGTTGGTATGCTCTTC 825
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1435 ATCGGAGTCAAGAACTCATTGATCATGCTTGGTGTCATTAACTTTGTTGGTATGCTCTTC 1494
Query 826 ACCTTCCTCGTCCCTGAGCCCAAAGGCAAGTCCCTTGAAGAACTCTCCGGCGAGGCTGAG 885
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1495 ACCTTCCTCGTCCCTGAGCCCAAGGGCAAGTCCCTTGAAGAACTCTCCGGCGAGGCTGAG 1554
Query 886 GTTGATAAATGA 897
||||||||||||
Sbjct 1555 GTTGATAAATGA 1566
> AT5G43350.1 | Symbols: ATPT1, PHT1;1 | phosphate transporter
1;1 | chr5:17399789-17401949 REVERSE LENGTH=1783
Length=1783
Score = 1064 bits (576), Expect = 0.0
Identities = 800/906 (88%), Gaps = 24/906 (3%)
Strand=Plus/Plus
Query 1 ATGTTTGGCGCTTTACCCGCGGCTTTGACCTACTACTGGCGTATGAAGATGCCTGAAACT 60
|||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct 737 ATGTTTGGTGCTTTACCCGCAGCTTTGACTTACTACTGGCGTATGAAGATGCCTGAAACT 796
Query 61 GCCCGCTACACTGCTTTAGTTGCCAAGAACATTAAGA-AAGCCACA-CAAGACATGTCCA 118
||||| ||||| ||||| |||||||||||||| || | |||||||| | ||||||||||
Sbjct 797 GCCCGTTACACCGCTTTGGTTGCCAAGAACATCAA-ACAAGCCACAGC-CGACATGTCCA 854
Query 119 AGGTCTTACAAGTGGATATTGAGGTTGAAGAAA--G-GG-CG--GA-G-----GACCCCA 166
||||||||||| ||||| ||| |||| |||| | || | || | |||||||
Sbjct 855 AGGTCTTACAAACAGATATCGAGCTTGAGGAAAGGGTGGAGGATGACGTCAAAGACCCCA 914
Query 167 AACTAAACTATGGCTTGTTCTCCAAGGAATTCCTTAGACGCCATGGGCTTCATCTCCTTG 226
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 915 AACAAAACTATGGCTTGTTCTCCAAGGAATTCCTTAGACGCCATGGGCTTCATCTCCTTG 974
Query 227 GGACTACCTCCACTTGGTTTTTGCTTGACATCGCCTTCTACAGCCAAAACTTGTTCCAAA 286
| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct 975 GAACTACCTCCACATGGTTTTTGCTTGACATTGCCTTCTACAGCCAAAACTTGTTCCAGA 1034
Query 287 AGGATATTTTCTCGGCCATTGGATGGATCCCAAAGGCAGCCACTATGAACGCCATCCATG 346
||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||
Sbjct 1035 AGGATATTTTCTCGGCCATCGGATGGATCCCAAAGGCAGCCACCATGAACGCCACCCATG 1094
Query 347 AGGTTTTCAAGATTGCTAAGGCTCAGACTCTCATTGCCCTTTGCAGTACAGTCCCAGGTT 406
||||||||| |||||||| |||||||||||| || ||||||||||||||||||||||| |
Sbjct 1095 AGGTTTTCAGGATTGCTAGGGCTCAGACTCTTATCGCCCTTTGCAGTACAGTCCCAGGCT 1154
Query 407 ACTGGTTCACGGTTGCTTTTATTGATATCATTGGAAGGTTTGCGATCCAACTAA-TGGGA 465
|||||||||| ||||| |||||||||| ||||||||||||| ||||||||||| ||| |
Sbjct 1155 ACTGGTTCACAGTTGCGTTTATTGATACCATTGGAAGGTTTAAGATCCAACTAAATGG-A 1213
Query 466 TTCTTTT-TCATGACGGTCTTTATGTTCGCCATTGCCTTCCCATACAACCACTGGATTTT 524
|| ||| | ||||| || |||||||| |||||||||||||| ||||||||||||||
Sbjct 1214 TT-TTTCATGATGACCGTGTTTATGTTTGCCATTGCCTTCCCTTACAACCACTGGATCAA 1272
Query 525 ACCAGATAATCGTATCGGATTCGTGATTATGTACTCACTCACATTT-TTCTTCGCCAACT 583
|||||| || ||||||||||| ||| |||||||||| || || ||| ||||||||||| |
Sbjct 1273 ACCAGAAAACCGTATCGGATTTGTGGTTATGTACTCTCTTAC-TTTCTTCTTCGCCAATT 1331
Query 584 TTGGACCCAATGCAACCACTTTCATTGTCCCAGCTGAAATCTTTCCGGCCAGGCTTAGAT 643
|||| || |||||||||||||| |||||||| ||||| || || ||||||||||| || |
Sbjct 1332 TTGGTCCAAATGCAACCACTTTTATTGTCCCTGCTGAGATATTCCCGGCCAGGCTAAGGT 1391
Query 644 CTACGTGCCATGGAATATCAGCCGCGACAGGTAAGGCTGGAGCTATCGTTGGAGCCTTCG 703
|||| || |||||||||||||||||| | |||||||||||||| || ||||||||||| |
Sbjct 1392 CTACATGTCATGGAATATCAGCCGCGGCTGGTAAGGCTGGAGCCATTGTTGGAGCCTTTG 1451
Query 704 GGTTCCTATATGCTGCTCAGCCACAGGATAAGACCAAGACAGACGCAGGATACCCACCGG 763
||||||||||||| ||||| |||| || ||| ||||| |||||||||||||||||| |
Sbjct 1452 GGTTCCTATATGCGGCTCAATCACAAGACAAGGCCAAGGTAGACGCAGGATACCCACCAG 1511
Query 764 GCATCGGAGTCAAGAACTCACTGATCATGCTTGGTGT-CATTAACTTTGTTGGTATGCTC 822
|||||||||| ||||||||| |||||||||||||||| | |||||||| | |||||||||
Sbjct 1512 GCATCGGAGTTAAGAACTCATTGATCATGCTTGGTGTTC-TTAACTTTATCGGTATGCTC 1570
Query 823 TTCACCTTCCTCGTCCCTGAGCCCAAAGGCAAGTCCCTTGAAGAACTCTCCGGCGAGGCT 882
||||||||||| ||||| |||||||||||||||||||||||||||||||| || ||||||
Sbjct 1571 TTCACCTTCCTTGTCCCAGAGCCCAAAGGCAAGTCCCTTGAAGAACTCTCTGGTGAGGCT 1630
Query 883 GAGGTT 888
||||||
Sbjct 1631 GAGGTT 1636
> AT5G43370.1 | Symbols: APT1, PHT2, PHT1;2 | phosphate transporter
2 | chr5:17415772-17417798 FORWARD LENGTH=1621
Length=1621
Score = 987 bits (534), Expect = 0.0
Identities = 787/907 (87%), Gaps = 26/907 (3%)
Strand=Plus/Plus
Query 1 ATGTTTGGCGCTTTACCCGCGGCTTTGACCTACTACTGGCGTATGAAGATGCCTGAAACT 60
|||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct 704 ATGTTTGGTGCTTTACCCGCAGCTTTGACTTACTACTGGCGTATGAAGATGCCTGAAACT 763
Query 61 GCCCGCTACACTGCTTTAGTTGCCAAGAACATTAAGA-AAGCCACA-CAAGACATGTCCA 118
||||| ||||| ||||| |||||||||||||| || | |||||||| | ||||||||||
Sbjct 764 GCCCGTTACACCGCTTTGGTTGCCAAGAACATCAA-ACAAGCCACAGC-CGACATGTCCA 821
Query 119 AGGTCTTACAAGTGGATATTGAGGTTGAAGAAA--G-GG-CG--GA-G-----GACCCCA 166
||||||||||| ||||| ||| |||| |||| | || | || | |||||||
Sbjct 822 AGGTCTTACAAACAGATATCGAGCTTGAGGAAAGGGTGGAGGATGACGTCAAAGACCCCA 881
Query 167 AACTAAACTATGGCTTGTTCTCCAAGGAATTCCTTAGACGCCATGGGCTTCATCTCCTTG 226
|| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 882 GACAAAACTATGGCTTGTTCTCCAAGGAATTCCTTAGACGCCATGGACTTCATCTCCTTG 941
Query 227 GGACTACCTCCACTTGGTTTTTGCTTGACATCGCCTTCTACAGCCAAAACTTGTTCCAAA 286
| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct 942 GAACTACCTCCACTTGGTTTTTGCTTGACATTGCCTTCTACAGCCAAAACTTGTTCCAGA 1001
Query 287 AGGATATTTTCTCGGCCATTGGATGGATCCCAAAGGCAGCCACTATGAACGCCATCCATG 346
||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||
Sbjct 1002 AGGATATTTTCTCGGCCATCGGATGGATCCCAAAGGCAGCCACCATGAACGCCACCCATG 1061
Query 347 AGGTTTTCAAGATTGCTAAGGCTCAGACTCTCATTGCCCTTTGCAGTACAGTCCCAGGTT 406
||||||||| |||||||| |||||||||||| || ||||||||||||||||||||||| |
Sbjct 1062 AGGTTTTCAGGATTGCTAGGGCTCAGACTCTTATCGCCCTTTGCAGTACAGTCCCAGGCT 1121
Query 407 ACTGGTTCACGGTTGCTTTTATTGATATCATTGGAAGGTTTGCGATCCAACTAA-TGGGA 465
|||||||||| ||||| |||||||||| ||||||||||||| ||||||||||| ||| |
Sbjct 1122 ACTGGTTCACAGTTGCGTTTATTGATACCATTGGAAGGTTTAAGATCCAACTAAATGG-A 1180
Query 466 TTCTTTT-TCATGACGGTCTTTATGTTCGCCATTGCCTTCCCATACAACCACTGGATTTT 524
|| ||| | ||||| || |||||||| |||||||||||||| ||||||||||||||
Sbjct 1181 TT-TTTCATGATGACCGTGTTTATGTTTGCCATTGCCTTCCCTTACAACCACTGGATCAA 1239
Query 525 ACCAGATAATCGTATCGGATTCGTGATTATGTACTCACTCACATTT-TTCTTCGCCAACT 583
|||||| || ||||||||||| ||| |||||||||| || || ||| ||||||||||| |
Sbjct 1240 ACCAGAAAACCGTATCGGATTTGTGGTTATGTACTCTCTTAC-TTTCTTCTTCGCCAATT 1298
Query 584 TTGGACCCAATGCAACCACTTTCATTGTCCCAGCTGAAATCTTTCCGGCCAGGCTTAGAT 643
|||| || |||||||||||||| |||||||| ||||| || || ||||||||||| || |
Sbjct 1299 TTGGTCCAAATGCAACCACTTTTATTGTCCCTGCTGAGATATTCCCGGCCAGGCTAAGGT 1358
Query 644 CTACGTGCCATGGAATATCAGCCGCGACAGGTAAGGCTGGAGCTATCGTTGGAGCCTTCG 703
| || || |||||||||||||||||| | |||||||||||||| ||| ||||||||||||
Sbjct 1359 CAACATGTCATGGAATATCAGCCGCGGCTGGTAAGGCTGGAGCCATCATTGGAGCCTTCG 1418
Query 704 GGTTCCTATATGCTGCTCAGCCA-CAGGATAAGACCAAGACAGACGCAGGATACCCACCG 762
||||| ||||||| ||||| | || || ||| | ||| || ||||||||||||||
Sbjct 1419 GGTTCTTATATGCGGCTCAAA-ATCAAGACAAGGCTAAGGTGGATGCAGGATACCCACCA 1477
Query 763 GGCATCGGAGTCAAGAACTCACTGATCATGCTTGGTGT-CATTAACTTTGTTGGTATGCT 821
|| |||||||| ||||||||| ||||| |||||||||| | ||||||| | ||||||||
Sbjct 1478 GGTATCGGAGTTAAGAACTCATTGATCGTGCTTGGTGTTC-TTAACTTCATCGGTATGCT 1536
Query 822 CTTCACCTTCCTCGTCCCTGAGCCCAAAGGCAAGTCCCTTGAAGAACTCTCCGGCGAGGC 881
|||||||||||| ||||| |||||||| ||||||||||| ||||||||||| || || ||
Sbjct 1537 CTTCACCTTCCTTGTCCCAGAGCCCAAGGGCAAGTCCCTCGAAGAACTCTCTGGTGAAGC 1596
Query 882 TGAGGTT 888
||| |||
Sbjct 1597 TGAAGTT 1603
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 43804176184
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5