BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg918717

Length=513
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT2G39410.2 | Symbols:  | alpha/beta-Hydrolases superfamily pro...   837    0.0  


> AT2G39410.2 | Symbols:  | alpha/beta-Hydrolases superfamily protein 
| chr2:16455569-16458217 FORWARD LENGTH=1052
Length=1052

 Score =  837 bits (453),  Expect = 0.0
 Identities = 493/513 (96%), Gaps = 0/513 (0%)
 Strand=Plus/Plus

Query  1     ATCGCAGAAGAAATGAAGCCAAGTCCTTTTGTTATTTCGATATTAACAAAGCTTATCTCC  60
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || 
Sbjct  540   ATCGCAGAAGAAATGAAGCCAAGTCCTTTTGTTATTTCGATATTAACAAAGCTTATTTCG  599

Query  61    ATTATACCCAAATGGAAAATCATTCCTAGTCAAGATATCATCGAGATTTCATATAAAGAG  120
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  600   ATTATACCCAAATGGAAAATCATTCCTAGTCAAGATATCATCGAGATTTCATATAAAGAG  659

Query  121   CCAGAAATAAGAAAACAGGTTAGAGAAAATCCGTTATGCTCCAAAGGACGACCACGCTTG  180
             |||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct  660   CCAGAAATTAGAAAACAGGTTAGAGAAAATCCTTTATGCTCGAAAGGACGACCACGCTTG  719

Query  181   AAAACTGCGTATGAGCTCTTAAGGATCAGCAACGACTTGGAGAAGTCACTTAAAGAGGTT  240
             |||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||
Sbjct  720   AAAACTGCGTATGAGCTCTTAAGGATCAGCAACGACTTGGAGAAGAGACTTCAAGAGGTT  779

Query  241   TCATTGCCGTTTATGGTATTACACGGAGGTGATGATAAAGTAACAGATAAAGCAGTGAGC  300
             |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct  780   TCATTGCCGTTTTTGGTATTACACGGAGATGATGATAAAGTAACAGATAAAGCAGTGAGC  839

Query  301   CAAGAACTGTACAAGGTTGCGTTGAGCGCTGACAAGACCTTAAAGTTGTACCCTGGGATG  360
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  840   CAAGAACTGTACAAGGTTGCGTTGAGCGCTGACAAGACCTTAAAGTTGTACCCTGGGATG  899

Query  361   TGGCACGGTTTGCTCAACGGCGAGACACCAGAGAACATTGAAATTGTCTTTGCCGACGTC  420
             |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct  900   TGGCACGGTTTGCTCACCGGCGAGACACCAGAGAACATCGAAATTGTCTTTGCCGACGTC  959

Query  421   ATCGGATGGTTGGAAAAAAGAAGTGATTATGGAAATGATAGGTTTGAGTCGGAGCTTAAA  480
             ||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct  960   ATCAGTTGGTTGGAAAAAAGAAGTGATTATGGAAATGATAGGTTTGAGTCAGAGCTTAAA  1019

Query  481   CAGAATAATGATGGTTTTAATTTCAAGGAATAG  513
             |||  ||||||| |||| ||||||||| |||||
Sbjct  1020  CAGCGTAATGATCGTTTAAATTTCAAGAAATAG  1052



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 24514263736


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5