BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg918775
Length=931
Score E
Sequences producing significant alignments: (Bits) Value
AT1G01800.1 | Symbols: | NAD(P)-binding Rossmann-fold superfam... 1519 0.0
> AT1G01800.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr1:293342-295040 FORWARD LENGTH=1094
Length=1094
Score = 1519 bits (822), Expect = 0.0
Identities = 896/932 (96%), Gaps = 3/932 (0%)
Strand=Plus/Plus
Query 1 TCTCTGTCATTTCATCAAATCCAATGGCAAACACAAGAGTTGCAGTTGTTACTGGTTCCA 60
|||||||| ||||| | ||| |||||||| || |||||||||||||||||||||||||||
Sbjct 33 TCTCTGTCCTTTCAAC-AATTCAATGGCAGACCCAAGAGTTGCAGTTGTTACTGGTTCCA 91
Query 61 ACAAAGGGATCGGGTTTGAGACTTGCAGGCAACTAGCTAAAAATGGGATAACTGTGATTC 120
|||||||||| |||||||||| |||||||||||||||||| ||||||||||||||| ||
Sbjct 92 ACAAAGGGATTGGGTTTGAGATTTGCAGGCAACTAGCTAACAATGGGATAACTGTGGTTT 151
Query 121 TAACTGCCAGAGATGAGAACAAGGGTCTTGCTGCTGTCCAAAAGCTCAAGACTGAGAATG 180
||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 152 TAACTGCGAGAGATGAAAACAAGGGTCTTGCTGCTGTCCAAAAGCTCAAGACTGAGAATG 211
Query 181 GTTTTTCTGATCAAGCCATCTCCTTTCACCCTCTTGATGTCTCCAACCCAGACACCATCT 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 212 GTTTTTCTGATCAAGCCATCTCCTTTCACCCTCTTGATGTCTCCAACCCAGACACCATCG 271
Query 241 CTTCTCTTGCTGCTTTTGTTAAGACCCGCTTCGGCAAACTCGATATTCTGGTTAATAATG 300
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 272 CTTCTCTTGCTGCTTTTGTCAAGACCCGCTTCGGCAAACTCGATATTCTGGTTAATAATG 331
Query 301 CCGGAGTTGGAGGGGCCAATGTTAATGTCGATGTTCTCAAAGCTCAGATTGCTGAGGCTG 360
|||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct 332 CCGGAGTTGGAGGGGCGAATGTTAATGTTGATGTTCTCAAAGCTCAGATTGCTGAGGCTG 391
Query 361 GTGCGCCAACTGATATTTCCAAGATAATGAGCGATACATATGAGATAGTCGAGGAGTGTA 420
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 392 GTGCGCCAACTGATATTTCCAAGATAATGAGTGATACATATGAGATAGTCGAGGAGTGTG 451
Query 421 TTAAAACAAACTACTATGGCGTAAAACGAATGTGCGAGGCCATGATTCCTCTCCTTCAAT 480
|||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||
Sbjct 452 TTAAAACAAACTACTACGGCGTTAAGCGAATGTGCGAGGCCATGATTCCTCTCCTTCAAT 511
Query 481 CTTCTGATTCCCCAAGAATCGTCAGCATCGCTTCAACCATGGGAAAGTTAGAGAATGTTT 540
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 512 CTTCTGATTCCCCAAGAATCGTCAGCATCGCTTCCACCATGGGAAAGTTAGAGAATGTTT 571
Query 541 CAAATGAATGGGCAAAAGGAGTGCTGAGTGATGCTGAGAACCTAACAGAAGAGAAAATAG 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 572 CAAATGAATGGGCAAAAGGAGTGCTGAGTGATGCTGAGAACCTAACAGAAGAGAAAATAG 631
Query 601 ATGAAGTGATCAATGAGTACCTCAAGGATTACAAAGAAGGTGCATTACAAGTCAAAGGTT 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 632 ATGAAGTGATCAATGAGTACCTCAAGGATTACAAAGAAGGTGCATTACAAGTCAAAGGTT 691
Query 661 GGCCAACAGTAATGTCCGGATACATACTATCAAAAGCTGCAGTGATTGCATTGACACGAG 720
|||||||||| ||||| |||||||||||||| |||||||||||||| |||||||||||||
Sbjct 692 GGCCAACAGTGATGTCTGGATACATACTATCGAAAGCTGCAGTGATCGCATTGACACGAG 751
Query 721 TATTGGCCAAGCGAAACAAATCGTTCATCATCAACAGTGTTTGTCCTGGTTTCGTAAACA 780
||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 752 TATTGGCTAAGCGACACAAATCGTTCATCATCAACAGTGTTTGTCCTGGTTTCGTAAACA 811
Query 781 CAGAAATCAATTTCAACACTGGGATATTGAGCGTTGAAGAAGGTGCAGCGAGTCCAGTGA 840
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 812 CAGAAATCAATTTCAACACTGGGATCTTGAGCGTTGAAGAAGGTGCAGCGAGTCCAGTGA 871
Query 841 AACTGGCTTTGGTCTCTAATGGAGACCCATCTGGCCTTTTCTTTGATCGCGCCAATGTCT 900
|||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 872 AACTGGCTTTGGTCCCTAATGGAGACCCATCTGGTCTTTTCTTTGATCGCGCCAATGTCT 931
Query 901 CCAACTTTTGACTT-TTCGATCTTGTGTGTTC 931
||||||||||| || ||| ||||| |||||||
Sbjct 932 CCAACTTTTGA-TTCTTCAATCTTATGTGTTC 962
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 45512137182
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5