BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg918805
Length=1205
Score E
Sequences producing significant alignments: (Bits) Value
AT1G01560.2 | Symbols: ATMPK11, MPK11 | MAP kinase 11 | chr1:20... 1284 0.0
AT4G01370.1 | Symbols: ATMPK4, MPK4 | MAP kinase 4 | chr4:56709... 822 0.0
AT2G46070.1 | Symbols: ATMPK12, MAPK12, MPK12 | mitogen-activat... 492 4e-138
> AT1G01560.2 | Symbols: ATMPK11, MPK11 | MAP kinase 11 | chr1:202136-204189
FORWARD LENGTH=1319
Length=1319
Score = 1284 bits (695), Expect = 0.0
Identities = 758/788 (96%), Gaps = 6/788 (1%)
Strand=Plus/Plus
Query 1 TTGTTGGAAGGAAGAGAGAAATGTCGATAGAGACAA-CATTCTTCGGTGATGACAGCAAC 59
||||||| || |||||||||||||| ||||||| || |||||||||||||||||||||||
Sbjct 190 TTGTTGGGAGAAAGAGAGAAATGTCAATAGAGA-AACCATTCTTCGGTGATGACAGCAAC 248
Query 60 AGAGGAGTGAGTATCAACGGTGGTCGTTATGTTCAGTATAATGTCTATGGAAACCTCTTC 119
|||||||| |||||||| |||||||||||||| |||||||||||||||||||| |||||
Sbjct 249 AGAGGAGTAAGTATCAATGGTGGTCGTTATGTGCAGTATAATGTCTATGGAAATCTCTTT 308
Query 120 GAAGTTTCTCAAAAA-TATGTTCCTCCTCTTCGTCCTATCGGCAGAGGCGCTTCTGGCAT 178
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 309 GAAGTTTCT-AAAAAGTATGTTCCTCCTCTTCGTCCTATCGGCAGAGGCGCTTCTGGCAT 367
Query 179 CGTCTGTGCTGCATGGAATTCGGAGACGGGTGAGGAAGTAGCGATCAAGAAGATTGGTAA 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 368 CGTCTGTGCTGCATGGAATTCGGAGACGGGTGAGGAAGTAGCGATCAAGAAGATTGGTAA 427
Query 239 TGCTTTTGGCAACATTATCGACGCTAAGAGAACTTTGAGAGAGATTAAGCTTCTTAAGCA 298
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 428 TGCATTTGGCAACATTATCGACGCTAAGAGAACTTTGAGAGAGATTAAGCTTCTTAAGCA 487
Query 299 TATGGATCATGACAATGTCATTGCCATTAAAGACATAATAAGACCACCGCAGCCAGACAA 358
||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct 488 TATGGATCATGACAATGTCATTGCCATTATAGACATAATAAGACCACCTCAGCCAGACAA 547
Query 359 CTTCAATGATGTTCACATTGTCTATGAGTTAATGGACACTGATCTTCATCACATTATACG 418
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct 548 CTTCAATGATGTTCACATTGTCTATGAGTTAATGGACACTGATCTTCACCACATTATCCG 607
Query 419 CTCTAACCAACCGTTAACTGATGATCATTCACGGTTCTTCCTGTATCAGTTGTTGAGAGG 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 608 CTCTAACCAACCGTTAACTGATGATCATTCACGGTTCTTCCTGTATCAGTTGTTGCGAGG 667
Query 479 ACTCAAGTATGTGCATTCAGCTAATGTATTGCATCGTGATTTAAAACCAAGTAACTTGCT 538
|||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||
Sbjct 668 CCTCAAGTATGTGCATTCAGCCAATGTACTGCATCGTGATTTAAAACCGAGTAACTTGCT 727
Query 539 CCTGAATGCAAATTGTGACCTCAAGATTGGGGATTTTGGGCTTGCAAGGACTAAATCAGA 598
|||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 728 CCTGAATGCAAACTGTGACCTCAAGATTGGGGATTTTGGGCTTGCGAGGACTAAATCAGA 787
Query 599 GACAGACTTCATGACAGAATATGTCGTTACACGTTGGTACCGAGCTCCAGAGTTACTCCT 658
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 788 GACAGACTTCATGACAGAATATGTTGTTACACGTTGGTACCGAGCTCCAGAGTTGCTCCT 847
Query 659 TAATTGCTCAGAATACACTGCAGCTATCGATATTTGGTCTGTCGGTTGTATACTCGGTGA 718
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 848 TAATTGCTCAGAATACACTGCAGCTATCGACATTTGGTCTGTCGGTTGTATACTCGGTGA 907
Query 719 AATAATGAC-CAGAGAGCCGTTATTTCCGGGCAGAGATTATGTTCAGCAGCTTAGACTCA 777
||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 908 AATAATGACGCGG-GAGCCGTTATTTCCGGGCAGAGATTATGTTCAGCAGCTTAGACTCA 966
Query 778 TCACTGAG 785
||||||||
Sbjct 967 TCACTGAG 974
Score = 586 bits (317), Expect = 2e-166
Identities = 335/344 (97%), Gaps = 0/344 (0%)
Strand=Plus/Plus
Query 829 AGCTTATAGGCTCACCAGATGATTCAAGCCTAGGATTCTTAAGAAGCGACAACGCAAGAA 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 973 AGCTTATAGGCTCACCAGATGATTCAAGCCTAGGATTCTTAAGAAGCGACAACGCTAGAA 1032
Query 889 GATATGTAAGACAGCTTCCACAGTATCCAAGACAAAACTTTGCCGCTAGATTCCCAAACA 948
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1033 GATACGTAAGACAGCTTCCACAGTATCCAAGACAAAACTTTGCCGCTAGATTCCCAAACA 1092
Query 949 TGTCGGTTAATGCAGTTGATTTGCTGCAGAAAATGCTCGTCTTTGACCCAAACAGACGCA 1008
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1093 TGTCGGTCAATGCTGTTGATTTGCTGCAGAAAATGCTCGTCTTTGACCCAAACAGACGCA 1152
Query 1009 TTACAGTCGATGAAGCTTTGTCCCACCCTTACTTAGCACCGCTACACGAAAATAACGAGG 1068
|||||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||
Sbjct 1153 TTACAGTCGATGAAGCCTTGTGCCACCCTTACTTAGCACCGCTACACGAATATAACGAGG 1212
Query 1069 AACCTGTGTGTGTGAGACCGTTCCGTTTTGATTTCGAGCAACCTTCATTGACGGAAGAGA 1128
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1213 AACCTGTGTGTGTGAGACCGTTCCATTTTGATTTCGAGCAACCTTCATTGACGGAAGAGA 1272
Query 1129 ACATCAAGGAGCTTATATACCGTGAATCAGTCAAGTTTAACCCT 1172
||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1273 ACATCAAGGAGCTTATATATCGTGAATCAGTCAAGTTTAACCCT 1316
> AT4G01370.1 | Symbols: ATMPK4, MPK4 | MAP kinase 4 | chr4:567095-569088
FORWARD LENGTH=1454
Length=1454
Score = 822 bits (445), Expect = 0.0
Identities = 645/741 (87%), Gaps = 16/741 (2%)
Strand=Plus/Plus
Query 53 CAGCAACAGAGGAGTGAG-TA-TCAACGGTGGTCGTTATGTTCAGTATAATGTCTATGGA 110
||||| || ||||||| | || || | |||||| | |||||||||||||||||||||||
Sbjct 166 CAGCAGCAAAGGAGTG-GCTACTC-ATGGTGGTAGCTATGTTCAGTATAATGTCTATGGC 223
Query 111 AACCTCTTCGAAGTTTCTCA-AAAATATGTTCCTCCTCTTCGTCCTATCGGCAGAGGCGC 169
|| ||||||||||||||| | ||| |||||||||||||||||||||||||| ||||||||
Sbjct 224 AATCTCTTCGAAGTTTCT-AGAAAGTATGTTCCTCCTCTTCGTCCTATCGGTAGAGGCGC 282
Query 170 TTCTGGCATCGTCTGTGCTGCAT-GGAATTCGGAGACGGGTGAGGAAGTAGCGATCAAGA 228
|| ||| || ||||||||||| | || || ||||| || ||||| ||||| |||||||
Sbjct 283 TTATGGAATTGTCTGTGCTGC-TACAAACTCAGAGACTGGAGAGGAGGTAGCTATCAAGA 341
Query 229 AGATTGGTAATGCTTTTGGCAACATTATCGACGCTAAGAGAACTTTGAGAGAGATTAAGC 288
|||||||||||||||||| ||| |||||||| ||||| || |||||||||||||||||||
Sbjct 342 AGATTGGTAATGCTTTTGACAATATTATCGATGCTAAAAGGACTTTGAGAGAGATTAAGC 401
Query 289 TTCTTAAGCATATGGATCATGACAATGTCATTGCCAT-TAAA-GACATAATAAGACCACC 346
|||| ||||||||||||||||| ||||| |||| | | |||| || ||||||| ||||||
Sbjct 402 TTCTCAAGCATATGGATCATGAAAATGTGATTG-C-TGTAAAGGATATAATAAAACCACC 459
Query 347 GCAGCCAGACAACTTCAATGATGTTCACATTGTCTATGAG-TTAATGGACACTGATCTTC 405
|||| ||| ||||||||||||||| ||||||| |||||| || |||||||||||||| |
Sbjct 460 GCAGAGAGAGAACTTCAATGATGTTTACATTGTTTATGAGCTT-ATGGACACTGATCTCC 518
Query 406 ATCACATTATACGCTCTAACCAACCGTTAACTGATGATCATTCACGGTTCTTCCTGTATC 465
| || ||||| |||||||||||||| |||||||||||||||| ||||| || |||||||
Sbjct 519 ACCAAATTATTCGCTCTAACCAACCCTTAACTGATGATCATTGTCGGTTTTTTCTGTATC 578
Query 466 AGTTGTTGAGAGGACTCAAGTATGTGCATTCAGCTAATGTATTGCATCGTGATTTAAAAC 525
|||||||| | || ||||| ||||| ||||||||||||||||||||||| ||||| ||||
Sbjct 579 AGTTGTTGCGTGGGCTCAAATATGTTCATTCAGCTAATGTATTGCATCGAGATTTGAAAC 638
Query 526 CAAGTAACTTGCTCCTGAATGCAAATTGTGACCTCAAGATTGGGGATTTTGGGCTTGCAA 585
| || || ||||||||||||||||||||||| || ||| |||||||||| |||||||| |
Sbjct 639 CTAGCAATTTGCTCCTGAATGCAAATTGTGATCTAAAGCTTGGGGATTTCGGGCTTGCGA 698
Query 586 GGACTAAATCAGAGACAGACTTCATGACAGAATATGTCGTTACACGTTGGTACCGAGCTC 645
|||| ||||| ||||| ||||| ||||| |||||||| |||||||||||||| |||||||
Sbjct 699 GGACCAAATCCGAGACTGACTTTATGACTGAATATGTTGTTACACGTTGGTATCGAGCTC 758
Query 646 CAGAGTTACTCCTTAATTGCTCAGAATACACTGCAGCTATCGATATTTGGTCTGTCGGTT 705
||||| | || ||||||||||| |||||||| ||||| || |||||||||||||||||||
Sbjct 759 CAGAGCTGCTACTTAATTGCTCTGAATACACAGCAGCAATTGATATTTGGTCTGTCGGTT 818
Query 706 GTATACTCGGTGAAATAATGAC-CAGAGAGCCGTTATTTCCGGGCAGAGATTATGTTCAG 764
||||||||||||||| |||||| | ||||||| || ||||| || | ||||||||||||
Sbjct 819 GTATACTCGGTGAAACAATGACAC-GAGAGCCCTTGTTTCCCGGTAAAGATTATGTTCAT 877
Query 765 CAGCTTAGACTCATCACTGAG 785
|||||||||||||||||||||
Sbjct 878 CAGCTTAGACTCATCACTGAG 898
> AT2G46070.1 | Symbols: ATMPK12, MAPK12, MPK12 | mitogen-activated
protein kinase 12 | chr2:18945981-18947823 REVERSE LENGTH=1325
Length=1325
Score = 492 bits (266), Expect = 4e-138
Identities = 577/725 (80%), Gaps = 30/725 (4%)
Strand=Plus/Plus
Query 76 ACGGTGGTCGTTATGTTCAGTATAATGTCTATGGA-AACCTCTTCGAAGTTTCTCA-AAA 133
||||||| || ||||||||||| || || |||||| || ||||| |||||||| || |||
Sbjct 112 ACGGTGGCCGCTATGTTCAGTACAACGTTTATGGACAA-CTCTTTGAAGTTTC-CAGAAA 169
Query 134 ATATGTTCCTCCTCTTCGTCCTATCGGCAGAGGCGCTT-CTGGCATCGTCTGTGCTGCAT 192
||||| |||||| ||||||| || || |||||||||| | || || |||||||||||
Sbjct 170 GTATGTCCCTCCTATTCGTCCCATTGGTAGAGGCGCTTGC-GGTATTGTCTGTGCTGC-G 227
Query 193 G-GAATTCGGAGACGGGTGAGGAAGTAGCGATCAAGAAGATTGGTAATGCTTTTGGCAAC 251
| ||| || | ||| || ||| |||| || || |||||||| ||||||||||||| |||
Sbjct 228 GTGAACTCAGTGACTGGAGAGAAAGTGGCTATTAAGAAGATCGGTAATGCTTTTGATAAC 287
Query 252 ATTATCGACGCTAAGAGAACTTTGA-GAGAGATTAAGCTTCTTAAGCATATGGATCATGA 310
|| ||||| ||||||||||| | | | || ||||| ||||| | |||||||||||||||
Sbjct 288 ATCATCGATGCTAAGAGAACGCT-ACGTGAAATTAAACTTCTCAGGCATATGGATCATGA 346
Query 311 CAATGTCATTGCCATTAAAGACATAATAAGACCACCGCAGCCAGACAACTTCAATGATGT 370
|| || || |||| ||||| || ||||||| ||||| | ||| | |||||||||||
Sbjct 347 GAACGTTATAACCATCAAAGATATTGTAAGACCTCCGCAACGAGATATCTTCAATGATG- 405
Query 371 TC-ACATTGTCTATGAGTTAATGGACACTGATCTTCATC-ACATTATACGCTCTAACCAA 428
|| |||||||||||||||||||||||||||||||||| | | || | || |||||||||
Sbjct 406 TCTACATTGTCTATGAGTTAATGGACACTGATCTTCAGCGA-ATCCTCCGTTCTAACCAA 464
Query 429 CCGTTAACT-GATGATCATT-CACGGTTCTTCCT-GTAT-C-AGTTGTTGAGAGGACTCA 483
| | || | |||||| | | || || | ||| |||| | || | || ||||| ||||
Sbjct 465 ACACTGACCAG-TGATCAATGC-CG-TT-T-CCTAGTATACCAGCTCTTAAGAGGGCTCA 519
Query 484 AGTATGTGCATTCAGCTAATGTATTGCATCGTGATTTAAAACCAAGTAACTTGCTCCTGA 543
| || ||||| || || || |||| ||||||||| ||| ||||| ||| |||| || |
Sbjct 520 AATACGTGCACTCGGCCAACATATTACATCGTGATCTAAGGCCAAGCAACGTGCTACTTA 579
Query 544 A-T-GCAAATTGTGACCTCAAGATTGGGGATTTTGGGCTTGCAAGGACTAAAT-CAGAGA 600
| | | ||| | | | | |||||||| ||||||||||||||||| || || | | || |
Sbjct 580 ACTCGAAAAACGAG-C-TAAAGATTGGTGATTTTGGGCTTGCAAGAAC-AACTTCCGACA 636
Query 601 CAGACTTCATGACAGAATATGTCGTTACACGTTGGTACCGAGCTCCAGAGTTACTCCTTA 660
||||||||||||| |||||||||||||| ||||||||| | ||||| ||||| || ||||
Sbjct 637 CAGACTTCATGACTGAATATGTCGTTACCCGTTGGTACAGGGCTCCTGAGTTGCTTCTTA 696
Query 661 ATTGCTCAGAATACACTGCAGCTATCGATATTTGGTCTGTCGGTTGTATACTCGGTGAAA 720
| |||||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||
Sbjct 697 ACTGCTCAGAGTACACCGCAGCTATTGATATTTGGTCTGTTGGCTGCATACTCGGCGAAA 756
Query 721 TAATGACCAGAGAGCCGTTATTTCCGGGCAGAGATTATGTTCAGCAGCTTAGACTCATCA 780
| ||||| || | ||||| ||||| |||| |||||||||||| |||||||| || || |
Sbjct 757 TCATGACGGGACAACCGTTGTTTCCAGGCAAAGATTATGTTCATCAGCTTAGGCTTATAA 816
Query 781 CTGAG 785
| |||
Sbjct 817 CAGAG 821
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 59186442555
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5