BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg918864
Length=1127
Score E
Sequences producing significant alignments: (Bits) Value
AT1G01070.1 | Symbols: | nodulin MtN21 /EamA-like transporter ... 1770 0.0
AT1G11460.1 | Symbols: | nodulin MtN21 /EamA-like transporter ... 1118 0.0
AT1G11450.2 | Symbols: | nodulin MtN21 /EamA-like transporter ... 983 0.0
> AT1G01070.1 | Symbols: | nodulin MtN21 /EamA-like transporter
family protein | chr1:38752-40944 REVERSE LENGTH=1311
Length=1311
Score = 1770 bits (958), Expect = 0.0
Identities = 1073/1126 (95%), Gaps = 18/1126 (2%)
Strand=Plus/Plus
Query 18 AGAGATGGGTGAAGGTATG-ATTGGAGTGAGAGTAGTAGAAAAATATTCACCGGTCATAG 76
||| |||| || || |||| | |||||||||||||||||||||||||||||||||||||
Sbjct 64 AGATATGGCTGGAGATATGCA-AGGAGTGAGAGTAGTAGAAAAATATTCACCGGTCATAG 122
Query 77 TGATGGTGATGTCAAACGTAGCGATGGGTTCGGTGAATGCACTTGTGAAGAAAGCTCTTG 136
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 123 TGATGGTGATGTCAAATGTAGCGATGGGTTCGGTGAATGCACTTGTGAAGAAAGCTCTTG 182
Query 137 ATGTTGGTGTGAACCATATGGTCATTGGTGCTTATCGAATGGCTATTTCCGCTTTCATTT 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 183 ATGTTGGTGTGAACCATATGGTCATTGGTGCTTATCGAATGGCTATTTCCGCTTTAATTT 242
Query 197 TGGTTCCCTTTGCCTATATCTTGGAAAGGAAAACAAGACCACAGATAACGTTTAGGCTAA 256
||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||
Sbjct 243 TGGTTCCCTTTGCCTATGTCTTGGAAAGGAAAACAAGACCACAAATAACGTTTAGGCTAA 302
Query 257 TGATCGATCATTTCGTCAGTGGCCTTCTCGGGGCGAGTTTGATGCAATTTTTCTTTTTGC 316
|| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 303 TGGTCGATCATTTCGTCAGTGGCCTTCTCGGGGCGAGTTTGATGCAGTTTTTCTTTTTGC 362
Query 317 TTGGTCTGTCGTACACGTCAGCAACTGTTTCGTGTGCTTTGGTAAGCATGTTGCCTGCAA 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 363 TTGGTCTGTCGTACACGTCAGCAACTGTTTCGTGTGCTTTGGTAAGCATGTTGCCTGCAA 422
Query 377 TCACCTTCGCTTTGGCCCTTATTTTCAGGACTGAAAATGTAAAGATTCTAAAGACCAAAG 436
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 423 TCACCTTCGCTTTGGCCCTTATTTTCAGGACTGAAAATGTGAAGATTCTAAAGACCAAAG 482
Query 437 CAGGAATGTTGAAGGTGATTGGAACTTTGATATGTATAAGTGGAGCTTTGTTCTTAACAT 496
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 483 CAGGAATGTTGAAGGTGATTGGAACTTTGATCTGTATAAGTGGAGCTTTGTTCTTAACAT 542
Query 497 TTTACAAAGGCCCACAAATATCAAACTCTCACTCTCAC------GGAGAGGCTTCCCACA 550
|||||||||||||||||||||||||||||||||||||| || | |||||||||||
Sbjct 543 TTTACAAAGGCCCACAAATATCAAACTCTCACTCTCACTCTCACGGTGGGGCTTCCCACA 602
Query 551 ACAAAAACGATCAAGACAACGCCAATAATTGGCTTCTTGGATGTCTTTACTTAACCATAG 610
|||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct 603 ACAACAACGATCAAGACAAGGCCAATAATTGGCTTCTTGGATGTCTTTATTTAACCATAG 662
Query 611 GAACTGTGTTGCTATCTCTATGGATGTTGTTTCAAGGGACTTTAAGTATTAAGTACCCTT 670
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 663 GAACAGTGTTGCTATCTCTATGGATGTTGTTTCAAGGGACTTTAAGTATTAAGTACCCTT 722
Query 671 GCAAATACTCGAGCACTTGTCTTATGTCAATCTTCGCGGCATTCCAATGTGCTCTCTTGA 730
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct 723 GCAAATACTCGAGCACTTGTCTTATGTCAATTTTCGCGGCATTTCAATGTGCTCTCTTGA 782
Query 731 GTCTTTACAAAAGCAGAGACGTTAATGATTGGATCATCGATGATAGATTCGTGATCACCG 790
| |||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 783 GCCTTTACAAGAGCAGAGACGTTAATGATTGGATCATAGATGATAGATTCGTTATCACCG 842
Query 791 TCATCATATACGCTGGAGTGGTAGGACAAGCAATGTCGACGGTAGCAACAACATGGGGGA 850
||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct 843 TCATCATATACGCTGGAGTGGTAGGACAAGCAATGACGACGGTTGCAACAACATGGGGGA 902
Query 851 T-AAAGAAATTAGGAGCTGTGTTCGCATCGGCATTTTTTCCACTTACTCTCATTTCGGCT 909
| ||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct 903 TTAAA-AAATTAGGAGCTGTGTTCGCATCGGCGTTTTTCCCACTTACTCTCATTTCGGCT 961
Query 910 ACTCTATTTGATTTCCTAATTTTACACACTCCTTTATACCTTGGAAGTGTGATTGGATCA 969
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 962 ACTCTATTTGATTTCCTCATTTTACACACTCCTTTATACCTTGGAAGTGTGATTGGATCA 1021
Query 970 CTAGTGACCATAACGGGTCTCTACATGTTTTTGTGGGGCAAGAACAAAGAAACGGAATCA 1029
||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct 1022 CTAGTGACCATAACGGGTCTCTACATGTTCTTGTGGGGGAAGAACAAAGAAACGGAATCA 1081
Query 1030 TCAACTGCATTGTCTTCTCGAATGGATAATGAAGCTCAA-A-A-TA-T--TAATAAGGAT 1083
||||||||||||||||| |||||||||| ||||||||| | | || | ||||||||||
Sbjct 1082 TCAACTGCATTGTCTTCAGGAATGGATAACGAAGCTCAATATACTACTCCTAATAAGGAT 1141
Query 1084 AACGACTCTAAGTCGCCCGTTTAATTTAA--ATATTGTTGTTAATG 1127
||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1142 AACGACTCTAAGTCGCCCGTTTAATTTAATTATATTGTTGTTAATG 1187
> AT1G11460.1 | Symbols: | nodulin MtN21 /EamA-like transporter
family protein | chr1:3857005-3859268 FORWARD LENGTH=1014
Length=1014
Score = 1118 bits (605), Expect = 0.0
Identities = 888/1023 (87%), Gaps = 25/1023 (2%)
Strand=Plus/Plus
Query 22 ATGGGTGAAGG-TATGATTGGAGTGAGAGTAGTAGAAAAATATTCACCGGTCATAGTGAT 80
||||||| ||| |||| | ||||| ||||| | ||||| ||||| | ||||| ||
Sbjct 1 ATGGGTG-AGGATATGCGAGTAGTGAAAGTAGAATCAAAATGGCCACCGATAATAGTAAT 59
Query 81 GGTGATGTCA-AACGTAGCGATGGGTTCGGTGAATGCACTTGTGAAGAAAGCTCTTGATG 139
||| || ||| || ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 60 GGTAATATCACAA-GTAGCAATGGGTTCGGTGAATGCACTTGTGAAGAAAGCTCTTGATG 118
Query 140 TTGGTGTGAACCATATGGTCATTGGTGCTTATCGAATGGCTATTTCCGCTTTCATTTTGG 199
||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||| |||
Sbjct 119 TTGGTGTGAACCATATGATCATTGGTGCTTATCGAATTGCTATTTCCTCTTTCATTCTGG 178
Query 200 TTCCCTTT-GCCTATATCTTGGAAAGGAAAACAAGACCACAGATAACGTTTAGGCTAATG 258
||| | | |||||||| ||||||||| ||| || ||| | ||||||||||||||||||
Sbjct 179 CTCC-TATCGCCTATATTTTGGAAAGGGAAATAATACCGGAAATAACGTTTAGGCTAATG 237
Query 259 ATCGATCATTTCGTCAGTGGCCTT-CTCGGGGCGAGTTTGATGCAATTTTTCTTTTTGCT 317
||||||||||| ||||||| || |||||||||||||||||||||||||||| ||||||
Sbjct 238 GTCGATCATTTCATCAGTGGA-TTGCTCGGGGCGAGTTTGATGCAATTTTTCTATTTGCT 296
Query 318 TGGTCTGTCGTACACGTCAGCAACTGTTTCGTGTGCTTTGGTAAGCATGTTGCCTGCAAT 377
||||||||| |||||||||||||||||| ||||||||||||||||| || ||||||||||
Sbjct 297 TGGTCTGTCTTACACGTCAGCAACTGTTGCGTGTGCTTTGGTAAGCTTGATGCCTGCAAT 356
Query 378 CACCTTCGCTTTGGCCCTTATTTTCAGGACTGAAAATG-TAAAGATTCTAAAGA-CCAAA 435
|||||| ||||| || |||||||| ||||||||||| | |||| | ||||| || || ||
Sbjct 357 CACCTTTGCTTTCGCTCTTATTTTGAGGACTGAAAA-GATAAAAAGTCTAA-GAACCCAA 414
Query 436 GCAGGAATGTTGAAGGTGATTGGAACT-TTGATATGTATAAGTGGAGCTTTGTTCTTAAC 494
||||||||| | || ||||| |||||| || |||||||||||||||||||||||||||||
Sbjct 415 GCAGGAATGATAAAAGTGATGGGAACTATT-ATATGTATAAGTGGAGCTTTGTTCTTAAC 473
Query 495 ATTTTACAAAGGCCCACAAATATCAAACTCTCACTCTCACGGAGAGGCT-T-CC-CACAA 551
||||||||||||||| || ||||||||||||||||||||| ||||||| | || |||||
Sbjct 474 ATTTTACAAAGGCCCTCATATATCAAACTCTCACTCTCACCAAGAGGCTCTTCCTCACAA 533
Query 552 CAA-AA-A-CGATCAAGACAACGCCAATAATTGGCTTCTTGGATGTCTTTACTTAACCAT 608
||| || | |||||| |||| | || |||||||||||||||||||| |||||||||||
Sbjct 534 CAACAACAGCGATCA---CAACACAAAGAATTGGCTTCTTGGATGTCTCTACTTAACCAT 590
Query 609 AGGAACTGTGTTGCTATCTCTATGGATGTTGTTTCAAGGGACTTTAAGTATTAAGTACCC 668
|||||| |||||| ||||||||||||| |||||||||||||||||||| || ||||||||
Sbjct 591 AGGAACCGTGTTGATATCTCTATGGATTTTGTTTCAAGGGACTTTAAGCATCAAGTACCC 650
Query 669 TTGCAAATACTCGAGCACTTGTCTTATGTCAATCTTCGCGGCATTCCAATGTGCTCTCTT 728
|||||||| ||| ||||||||||| |||||||| ||||| || || ||||||||||| ||
Sbjct 651 TTGCAAATTCTCAAGCACTTGTCTCATGTCAATTTTCGCAGCTTTTCAATGTGCTCTATT 710
Query 729 GAGTCTTTACAAAAGCAGAGACGTTAATGATTGGATCATCGATGATAGATTCGTGATCAC 788
|||||||||||| || ||||| ||||| ||||||||||||||||||||||| ||||||
Sbjct 711 GAGTCTTTACAAGAGTAGAGATGTTAAAGATTGGATCATCGATGATAGATTTGTGATCGG 770
Query 789 CGTCATCATATACGCTGGAGTGGTAGGACAAGCAATGTCGACGGTAGCAACAACATGGGG 848
|||||| |||| ||||||||| ||||||||||||||||||||||| || ||||||||
Sbjct 771 TGTCATCGTATATGCTGGAGTGATAGGACAAGCAATGTCGACGGTATCAGTGACATGGGG 830
Query 849 GATAAAGAAATTAGGAGCTGTGTTCGCATCGGCATTTTTTCCACTTA-CTCTCATTTCGG 907
| | ||||||||||||||||| |||| ||| ||| || | ||| | | ||||||||||||
Sbjct 831 GGTGAAGAAATTAGGAGCTGTTTTCGTATCAGCAATTATGCCAAT-AGCTCTCATTTCGG 889
Query 908 CTACTCTATTTGATTTCCTAATTTTACACACTCCTTTATACCTTGGAAGTGTGATTGGAT 967
||| |||||| |||||| |||| |||||||||||||||||||| |||||| |||||||||
Sbjct 890 CTAGTCTATTCGATTTCATAATCTTACACACTCCTTTATACCTCGGAAGTCTGATTGGAT 949
Query 968 CACTAGTGACCATAACGGGTCTCTACATGTTTTTGTGGGGCAAGAACAAAGAAACGGAAT 1027
|| ||| ||| ||||| ||||||||| |||| |||||||| ||||||||||| | ||||
Sbjct 950 CAGTAGGGACAATAACAGGTCTCTACGTGTTCTTGTGGGGTAAGAACAAAGATATGGAAG 1009
Query 1028 CAT 1030
|||
Sbjct 1010 CAT 1012
> AT1G11450.2 | Symbols: | nodulin MtN21 /EamA-like transporter
family protein | chr1:3853467-3855385 FORWARD LENGTH=1035
Length=1035
Score = 983 bits (532), Expect = 0.0
Identities = 787/909 (87%), Gaps = 21/909 (2%)
Strand=Plus/Plus
Query 172 CGAATGGCTATTTCCGCTTTCATTTTGGTTCCCT-TTGCCTATATCTTGGAAAGGAAAAC 230
||||||||||||||| |||||||| ||||| ||| | |||||| | |||||||||||||
Sbjct 1 CGAATGGCTATTTCCTCTTTCATTCTGGTT-CCTATCGCCTATTTTTTGGAAAGGAAAAT 59
Query 231 AAGACC-ACAGATAACGTTTAGGCTAATGATCGATCATTTCGTCAGTGGCCTT-CTCGGG 288
|| ||| | | |||||||||||||||||| ||||||||||| ||||||| || ||||||
Sbjct 60 AATACCGA-AAATAACGTTTAGGCTAATGGTCGATCATTTCATCAGTGG-TTTGCTCGGG 117
Query 289 GCGAGTTTGATGCAATTTTTCTTTTTGCTTGGTCTGTCGTACACGTCAGCAACTGTTTCG 348
|||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||
Sbjct 118 GCGAGTTTGATGCAATTTTTCTATTTGCTTGGTCTGTCCTACACGTCAGCAACTGTTGCG 177
Query 349 TGTGCTTTGGTAAGCATGTTGCCTGCAATCACCTTCGCTTTGGCCCTTATTTTCAGGACT 408
||||||||||||||| || |||||||||||||||| ||||| || |||||||| || |||
Sbjct 178 TGTGCTTTGGTAAGCTTGATGCCTGCAATCACCTTTGCTTTCGCTCTTATTTTGAGAACT 237
Query 409 GA-AA-ATGTAAAGATTCTAAAGACCAAAGCAGGAATGTTGAAGGTGATTGGAACTTTGA 466
|| || || ||||| |||||||||| ||||||||||| | || ||||| |||||| | |
Sbjct 238 GAGAAGAT-AAAAGA-TCTAAAGACCCAAGCAGGAATGATAAAAGTGATGGGAACTCTAA 295
Query 467 TATGTATAAGTGGAGCTTTGTTCTTAACATTTTACAAAGGCCCACAAATATCAAACTCTC 526
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct 296 TATGTATAAGTGGAGCTTTGTTCTTAACATTTTACAAAGGCCCTCATATATCAAACTCTC 355
Query 527 ACTCTCACGGAGAGGCT-T-CC-CACAACAAAAACGATCAAGACAACGCCAATAATTGGC 583
|||||||| ||||||| | || |||||||| | |||||| |||| |||| |||||||
Sbjct 356 ACTCTCACCTAGAGGCTCTTCCTCACAACAACAGCGATCA---CAACACCAAGAATTGGC 412
Query 584 TTCTTGGATGTCTTTACTTAACCATAGGAA-CTGTGTTGCTATCTCTATGGATGTTGTTT 642
||||||||||||| |||||| |||||||| | |||||||||||||||||||| ||||||
Sbjct 413 TTCTTGGATGTCTCTACTTAGTCATAGGAATC-GTGTTGCTATCTCTATGGATATTGTTT 471
Query 643 CAAGGGACTTTAAGTATTAAGTACCCTTGCAAATACTCGAGCACTTGTCTTATGTCAATC 702
|||||||||||||| || ||||| |||||||||| ||| ||||||||||| ||||||||
Sbjct 472 CAAGGGACTTTAAGCATCAAGTATCCTTGCAAATTCTCAAGCACTTGTCTCATGTCAATT 531
Query 703 TTCGCGGCATTCCAATGTGCTCTCTTGAGTCTTTACAAAAGCAGAGACGTTAATGATTGG 762
||||| || || ||||||||||| |||||||||||||| || |||||| |||| |||||
Sbjct 532 TTCGCAGCTTTTCAATGTGCTCTATTGAGTCTTTACAAGAGTAGAGACCTTAAACATTGG 591
Query 763 ATCATCGATGATAGATTCGTGATCACCGTCATCATATACGCTGGAGTGGTAGGACAAGCA 822
|||||||| ||| |||| ||||| ||||| ||||| ||||||||| |||||||||||
Sbjct 592 ATCATCGACGATGGATTTGTGATTGGTGTCATAATATATGCTGGAGTGATAGGACAAGCA 651
Query 823 ATGTCGACGGTAGCAACAACATGGGGGATAAAGAAATTAGGAGCTGTGTTCGCATCGGCA 882
|||||||| |||||| | |||||||| ||||| | |||||||||||| |||||||| |||
Sbjct 652 ATGTCGACTGTAGCAGCGACATGGGGAATAAACAGATTAGGAGCTGTTTTCGCATCAGCA 711
Query 883 TTTTTTCCACTTACTCTCATTTCGGCTACTCTATTTGATTTCCTAATTTTACACACTCCT 942
|| | ||| || ||||||| |||||||||||||| |||||||| || ||||||||||||
Sbjct 712 ATTATGCCAGTTTCTCTCATATCGGCTACTCTATTCGATTTCCTTATCTTACACACTCCT 771
Query 943 TTATACCTTGGAAGTGTGATTGGATCACTAGTGACCATAACGGGTCTCTACATGTTTTTG 1002
|||||||| |||||||||||||||||| ||| ||| |||| ||||||||| |||| |||
Sbjct 772 TTATACCTCGGAAGTGTGATTGGATCAGTAGGGACAATAATAGGTCTCTACGTGTTCTTG 831
Query 1003 TGGGGCAAGAACAAAGAAACGGAATCAT-CA-A-CTGCATTGTCTTCTCGAATGGATAAT 1059
||||| |||||||||||||||||| || || | || ||||||||||||| ||| | ||
Sbjct 832 TGGGGTAAGAACAAAGAAACGGAAGCAGACATAACTACATTGTCTTCTCGGATGAACAAC 891
Query 1060 GAAGCTCAA 1068
|||| ||||
Sbjct 892 GAAGATCAA 900
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 55270800045
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5