BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg918872 Length=646 Score E Sequences producing significant alignments: (Bits) Value AT1G02210.1 | Symbols: | NAC (No Apical Meristem) domain trans... 246 2e-64 > AT1G02210.1 | Symbols: | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein | chr1:427548-427811 REVERSE LENGTH=264 Length=264 Score = 246 bits (133), Expect = 2e-64 Identities = 209/244 (86%), Gaps = 12/244 (5%) Strand=Plus/Plus Query 236 GGTATGGTACTTCTATAGTCGTGATGACTATAAGTTTAACGAAGAAATATGGAAAACGAG 295 |||||||| ||||| |||| ||||||| || | |||||||||||||| |||||||| Sbjct 3 GGTATGGTTCTTCTTTAGTTGTGATGA--AT-A---TAACGAAGAAATATTGAAAACGAA 56 Query 296 TTCGGGTTATTGGAAAGAAACCGGATCCAACACACCAATCATCGGTAAGAGGAAAAGAAC 355 ||||||||||||||||||||| | |||||||||||||||||| || ||| ||| || | Sbjct 57 TTCGGGTTATTGGAAAGAAACTGTATCCAACACACCAATCATTGGCAAGTGGATAACTAG 116 Query 356 CAATGGTGTTAAGATTGGTGAGAAGA-AAGTTTTGGTGTTT-CAATCTTGTGCAAATCCT 413 ||||||||||| ||||||||||| | |||||||||| ||| ||||| | || ||| | | Sbjct 117 TAATGGTGTTAAAATTGGTGAGAA-ACAAGTTTTGGT-TTTCCAATCGTATG-AAAACAT 173 Query 414 -AATGGATCCAAATCCGATTGGGTAATGCACGTGTATCAACCCACGTTTTTGCCTCCCGA 472 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct 174 CAATGGATCCAAATCCGATTGGGTAATGCACGTGTATCAACCAACGTTTTTGCCTCCTAA 233 Query 473 TCAG 476 |||| Sbjct 234 TCAG 237 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 31195405287 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5