BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg918880
Length=1122
Score E
Sequences producing significant alignments: (Bits) Value
AT1G02305.1 | Symbols: | Cysteine proteinases superfamily prot... 1461 0.0
AT1G02300.1 | Symbols: | Cysteine proteinases superfamily prot... 1140 0.0
AT4G01610.1 | Symbols: | Cysteine proteinases superfamily prot... 791 0.0
> AT1G02305.1 | Symbols: | Cysteine proteinases superfamily protein
| chr1:455688-458164 FORWARD LENGTH=1407
Length=1407
Score = 1461 bits (791), Expect = 0.0
Identities = 1019/1127 (90%), Gaps = 23/1127 (2%)
Strand=Plus/Plus
Query 11 AGAGAGATTCATGGCTGATAGTTGTTGTATCAGACTTCTTCACTTAGCCT-T-TGTT-TT 67
||| |||| ||||||||||| |||||||||||||||||||| ||||| | | || ||
Sbjct 119 AGAAAGATCCATGGCTGATA---ATTGTATCAGACTTCTTCACTCAGCCTCTGTTTTCTT 175
Query 68 C---TT---GCTTTTAATTTCATCCTTCAAC---TTGCAGGGTACTGCAGCAGGAAATCT 118
| || |||| ||||||||||||||||| |||||||||| |||||| | ||||||
Sbjct 176 CTGTTTAGGGCTTCTAATTTCATCCTTCAACTTGTTGCAGGGTATTGCAGCTGAAAATCT 235
Query 119 TTCCAAGCAGAAACTGACCTCACT-GATTCTTCAGAATGAGATTGTAAAGGAAGTCAATG 177
|||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct 236 TTCCAAGCAGAAACTGACCTCA-TGGATTCTTCAGAATGAGATTGTAAAGGAAGTCAATG 294
Query 178 AGAATCCAAACGCTGGATGGAAAGCTTCTTTGAATGATCGGTTTGCAAACGCCACCGTTG 237
||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct 295 AGAATCCAAACGCTGGATGGAAAGCTTCTTTCAATGATCGGTTTGCAAACGCCACTGTTG 354
Query 238 CAGAGTTTAAGCGTCTCCTTGGTGTTAAACCAACACCAAAGACGGCATACTTAGGTGTAC 297
||||||||||||| || |||||||||||||||||||||||||||| || || ||||| |
Sbjct 355 CAGAGTTTAAGCGCCTTCTTGGTGTTAAACCAACACCAAAGACGGAATTTTTGGGTGTGC 414
Query 298 CTATTGTAAGACATGATATATCTTTGAAGCTTCCAAAAGAATTTGATGCTAGAACAGCTT 357
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 415 CTATTGTAAGCCATGATATATCTTTGAAGCTTCCAAAAGAATTTGATGCTAGAACCGCTT 474
Query 358 GGTCACAGTGCACAAGTATTCCAAGGATCTTAGATCAGGGTCATTGTGGTTCTTGCTGGG 417
||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct 475 GGTCACAGTGCACCAGTATTGGAAGGATCTTAGATCAGGGTCACTGTGGTTCTTGCTGGG 534
Query 418 CATTTGGTGCTGTTGAATCACTGTCCGACAGGTTTTGCATCAAATATAACTTGAATGTTT 477
| ||||||||||||||||||||||| ||||| || ||||||||||||||| |||||||||
Sbjct 535 CCTTTGGTGCTGTTGAATCACTGTCTGACAGATTCTGCATCAAATATAACATGAATGTTT 594
Query 478 CCTTATCTGCCAATGATGTTGTAGCATGTTGTGGATTACTTTGCGGTCTAGGTTGTAATG 537
| ||||||| ||||||| || |||||||||||||||| |||||||||| |||||||||||
Sbjct 595 CTTTATCTGTCAATGATCTTTTAGCATGTTGTGGATTCCTTTGCGGTCAAGGTTGTAATG 654
Query 538 GTGGATTCCCAATGGGTGCATGGCTGTACTTTAAATACCACGGTGTAGTAACCGAAGAGT 597
|||||| |||||| | ||| |||| ||||||||| ||||||||||||| || |||||||
Sbjct 655 GTGGATACCCAATTGCTGCGTGGCGGTACTTTAAGCACCACGGTGTAGTCACTGAAGAGT 714
Query 598 GTGATCCATACTTTGACAATACTGGTTGCTCTCACCCGGGATGTGAACCCGGTTACCCTA 657
||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct 715 GTGATCCATACTTCGACAATACTGGTTGCTCGCACCCGGGATGTGAACCCGCTTACCCTA 774
Query 658 CACCAAAATGTGTGAGGAAATGTGTTAGCGAAAACCAGCTATGGGGTGAATCAAAACACT 717
|||||||||||| |||||||||||||||| ||||||||| ||| ||||||||||||| |
Sbjct 775 CACCAAAATGTGCAAGGAAATGTGTTAGCGGAAACCAGCTTTGGCGTGAATCAAAACATT 834
Query 718 ATGGTGTCAACGCATACA-GAATCA-ATCATGACCCTCAAGACATTATGGCAGAGGTTTA 775
||||||| | || |||| | ||| ||| | ||||| | |||||||||||||| |||||
Sbjct 835 ATGGTGTTAGTGCGTACAAGG-TCAGATC-TCACCCTGATGACATTATGGCAGAAGTTTA 892
Query 776 CAAGAACGGACCTGTCGAGGTTGCTTTTACCGTTTACGAGGACTTTGCACATTACAAATC 835
||| || |||||||| |||||||| || || ||||||||||||||||| |||||||||||
Sbjct 893 CAAAAATGGACCTGTTGAGGTTGCCTTCACTGTTTACGAGGACTTTGCGCATTACAAATC 952
Query 836 AGGAGTGTACAAGCACATAACGGGTACTAAGATTGGAGGTCATGCTGTTAAGCTTATTGG 895
|||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||
Sbjct 953 TGGAGTGTACAAGCACATAACAGGTACTAACATTGGAGGTCATGCTGTTAAACTTATTGG 1012
Query 896 CTGGGGAACTTCTGATGACGGCGAAGATTATTGGTTGCTTGCAAATCAATGGAACCGAAG 955
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1013 CTGGGGAACTTCTGATGACGGTGAAGATTATTGGTTGCTTGCAAATCAATGGAACCGAAG 1072
Query 956 CTGGGGTGATGATGGTTACTTCAAGATCAGGAGAGGAACGAACGAATGTGGCATTGAACA 1015
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1073 CTGGGGTGATGATGGGTACTTCAAGATCAGGAGAGGAACAAACGAATGTGGCATTGAACA 1132
Query 1016 CGGTGTTGTAGCCGGTTTACCTTCAGACAGGAACGT-GTTTAAAGATATAACCACTTCAG 1074
||||||||||| ||||||||||||||||||||||| ||| |||| ||| || |||||||
Sbjct 1133 TGGTGTTGTAGCTGGTTTACCTTCAGACAGGAACGTAGTT-AAAGGTATTACTACTTCAG 1191
Query 1075 ATGATCTTCTGGTTTCCTCATTTTAAACAACAAGATGTGTCTCTACT 1121
|||||||||| |||||||||||||||||| || |||||||||||||
Sbjct 1192 ATGATCTTCTTGTTTCCTCATTTTAAACAGGAATATGTGTCTCTACT 1238
> AT1G02300.1 | Symbols: | Cysteine proteinases superfamily protein
| chr1:453288-455463 FORWARD LENGTH=1227
Length=1227
Score = 1140 bits (617), Expect = 0.0
Identities = 693/730 (95%), Gaps = 4/730 (1%)
Strand=Plus/Plus
Query 395 GGGTCATTGTGGTTCTTGCTGGGCATTTGGTGCTGTTGAATCACTGTCCGACAGGTTTTG 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 435 GGGTCATTGTGGTTCTTGCTGGGCATTTGGTGCTGTTGAATCACTGTCCGACAGGTTCTG 494
Query 455 CATCAAATATAACTTGAATGTTTCCTTATCTGCCAATGATGTTGTAGCATGTTGTGGATT 514
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 495 CATCAAATATAACTTGAATGTTTCCTTATCTGCCAATGATGTCATAGCATGTTGTGGATT 554
Query 515 ACTTTGCGGTCTAGGTTGTAATGGTGGATTCCCAATGGGTGCATGGCTGTACTTTAAATA 574
|||||||||| | |||||||||||||| |||||||||||||||||| |||||||||| ||
Sbjct 555 ACTTTGCGGTTTTGGTTGTAATGGTGGTTTCCCAATGGGTGCATGGTTGTACTTTAAGTA 614
Query 575 CCACGGTGTAGTAACCGAAGAGTGTGATCCATACTTTGACAATACTGGTTGCTCTCACCC 634
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 615 CCACGGTGTAGTAACCCAAGAGTGTGATCCATACTTTGACAATACTGGTTGCTCTCACCC 674
Query 635 GGGATGTGAACCCGGTTACCCTACACCAAAATGTGTGAGGAAATGTGTTAGCGA-AAACC 693
||||||||||||| |||||||||||||||||||| |||||||||||| ||| | |||||
Sbjct 675 GGGATGTGAACCCACTTACCCTACACCAAAATGTGAGAGGAAATGTGTAAGC-AGAAACC 733
Query 694 AGCTATGGGGTGAATCAAAACACTATGGTGTCAACGCATACAGAATCAATCATGACCCTC 753
|||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 734 AGCTATGGGGTGAATCAAAACACTATGGTGTCGGCGCATACAGAATCAATCCTGACCCTC 793
Query 754 AAGACATTATGGCAGAGGTTTACAAGAACGGACCTGTCGAGGTTGCTTTTACCGTTTACG 813
||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 794 AAGACATTATGGCTGAGGTTTACAAGAATGGACCTGTCGAGGTTGCTTTTACCGTTTACG 853
Query 814 AGGACTTTGCACATTACAAATCAGGAGTGTACAAGCACATAACGGGTACTAAGATTGGAG 873
|||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct 854 AGGACTTTGCACATTACAAATCAGGAGTATACAAGTACATAACGGGTACTAAGATTGGAG 913
Query 874 GTCATGCTGTTAAGCTTATTGGCTGGGGAACTTCTGATGACGGCGAAGATTATTGGTTGC 933
||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 914 GTCATGCAGTTAAGCTCATTGGCTGGGGAACTTCTGATGACGGCGAAGATTATTGGTTGC 973
Query 934 TTGCAAATCAATGGAACCGAAGCTGGGGTGATGATGGTTACTTCAAGATCAGGAGAGGAA 993
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 974 TTGCAAATCAATGGAACCGAAGCTGGGGTGATGATGGTTACTTCAAGATCAGGAGAGGAA 1033
Query 994 CGAACGAATGTGGCATTGAACACG-GTGTTGTAGCCGGTTTACCTTCAGACAGGAACGTG 1052
|||||||||||||||||||||| | |||||||||| |||||||||||||| | ||||||
Sbjct 1034 CGAACGAATGTGGCATTGAACA-GAGTGTTGTAGCTGGTTTACCTTCAGAGAAGAACGTA 1092
Query 1053 TTTAAAGATATAACCACTTCAGATGATCTTCTGGTTTCCTCATTTTAAACAACAAGATGT 1112
||||||| ||| |||||||||||||||||||||||||||||| | ||||||| | |||||
Sbjct 1093 TTTAAAGGTATTACCACTTCAGATGATCTTCTGGTTTCCTCAGTCTAAACAAGACGATGT 1152
Query 1113 GTCTCTACTT 1122
||| ||||||
Sbjct 1153 GTCCCTACTT 1162
Score = 545 bits (295), Expect = 3e-154
Identities = 348/373 (93%), Gaps = 6/373 (2%)
Strand=Plus/Plus
Query 21 ATGGCTGATAGTTGTTGTATCAGACTT--CTTCACTTAGCCTTTGTTTTCTTGCTTTTAA 78
||||||||||||||||||||||||||| ||| | ||||||| |||||||||||| |||
Sbjct 1 ATGGCTGATAGTTGTTGTATCAGACTTCACTT-A-TTAGCCTCTGTTTTCTTGCTCTTAT 58
Query 79 TTTCATCCTTCAACTTGCAGGGTACTGCAGCAGG-AAATCTTTCCAAGCAGAAACTGACC 137
|||||||||||||||||||||||| |||||| || |||||||||||||||||||||||||
Sbjct 59 TTTCATCCTTCAACTTGCAGGGTATTGCAGC-GGAAAATCTTTCCAAGCAGAAACTGACC 117
Query 138 TCACTGATTCTTCAGAATGAGATTGTAAAGGAAGTCAATGAGAATCCAAACGCTGGATGG 197
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 118 TCACTGATTCTTCAGAATGAGATTGTAAAGGAAGTCAATGAGAATCCAAACGCTGGTTGG 177
Query 198 AAAGCTTCTTTGAATGATCGGTTTGCAAACGCCACCGTTGCAGAGTTTAAGCGTCTCCTT 257
|||||| |||| ||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 178 AAAGCTGCTTTCAATGATCGGTTTGCAAATGCCACCGTTGCAGAGTTTAAGCGACTCCTC 237
Query 258 GGTGTTAAACCAACACCAAAGACGGCATACTTAGGTGTACCTATTGTAAGACATGATATA 317
||||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 238 GGTGTTATACAAACACCAAAGACGGCATACTTAGGTGTACCTATTGTAAGACATGATTTA 297
Query 318 TCTTTGAAGCTTCCAAAAGAATTTGATGCTAGAACAGCTTGGTCACAGTGCACAAGTATT 377
|| ||||||||||| |||||||||||||||||||| ||||||||||| ||||| ||||||
Sbjct 298 TCGTTGAAGCTTCCTAAAGAATTTGATGCTAGAACCGCTTGGTCACATTGCACCAGTATT 357
Query 378 CCAAGGATCTTAG 390
| |||||||||||
Sbjct 358 CGAAGGATCTTAG 370
> AT4G01610.1 | Symbols: | Cysteine proteinases superfamily protein
| chr4:694695-697206 FORWARD LENGTH=1511
Length=1511
Score = 791 bits (428), Expect = 0.0
Identities = 824/1014 (81%), Gaps = 32/1014 (3%)
Strand=Plus/Plus
Query 91 ACTTGCAGGGTACT-GCAGCAGGAAA-TCTTTCCAAGCAGAAACT-GACCTC-ACTGATT 146
||||| |||||| | | |||| |||| |||| |||| |||||||| || ||| | |||
Sbjct 233 ACTTGAAGGGTA-TAGAAGCA-GAAAGTCTTACCAAACAGAAACTGGA-CTCGA-AGATA 288
Query 147 CTTCAGAATGAGATTGTAAAGGAAGTCAATGAGAATCCAAACGCTGGATGGAAAGCTTCT 206
|||||| |||||||||| ||| ||||||| || || ||||||||||||||||||||| ||
Sbjct 289 CTTCAGGATGAGATTGTGAAGAAAGTCAACGAAAACCCAAACGCTGGATGGAAAGCTGCT 348
Query 207 TTGAATGATCGGTTTGCAAACGCCACCGTTGCAGAGTTTAAGCGTCTCCTTGGTGTTAAA 266
| |||||||| ||| |||||||||| |||||||||||||||||||| || |||||||||
Sbjct 349 ATAAATGATCGATTTTCAAACGCCACTGTTGCAGAGTTTAAGCGTCTTCTCGGTGTTAAA 408
Query 267 CCAACACCAAAGACGGCA-TACTTAGGTGTACCTATTGTAAGACATGATATATCTTTGAA 325
||||||||||||| ||| | ||||||||| |||||||| || |||||| |||||||||
Sbjct 409 CCAACACCAAAGA-AGCATTTCTTAGGTGTTCCTATTGTGAGCCATGATCCATCTTTGAA 467
Query 326 GCTTCCAAAAGAATTTGATGCTAGAACAGCTTGGTCACAGTGCACAAGTATTCCAAGGAT 385
||| || |||| |||||||||||||| |||||| |||||||||| |||||| || ||
Sbjct 468 GCTACCTAAAGCTTTTGATGCTAGAACTGCTTGGCCACAGTGCACTAGTATTGGAAACAT 527
Query 386 CTTAGATCAGGGTCATTGTGGTTCTTGCTGGGCATTTGGTGCTGTTGAATCACTGTCCGA 445
|||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct 528 CTTAGATCAGGGACATTGTGGTTCTTGCTGGGCATTTGGTGCTGTTGAATCACTATCAGA 587
Query 446 CAGGTTTTGCATCAAATATAACTTGAATGTTTCCTTATCTGCCAATGATGTTGTAGCATG 505
|| || || ||| ||| | | |||| |||| ||||| | |||||| | |||| ||
Sbjct 588 TAGATTCTGTATCCAATTTGGCATGAACATTTCTTTATCAGTAAATGATCTCCTAGCTTG 647
Query 506 TTGTGGATTACTTTGCGGTC-TAGGTTGTAATGGTGGAT-TCCCAATGGGTGCATGGCTG 563
||||||||| | ||| ||| | |||||| | ||||| | ||| ||| | ||| ||||
Sbjct 648 TTGTGGATTCCGTTGTGGTGAT-GGTTGTGACGGTGGCTATCC-AATTGCTGCTTGGCAA 705
Query 564 TACTTTAAATACCA-CGGTGTAGTAACCGAAGAGTGTGATCCATACTTTGACAATACTGG 622
|||||| || | |||||| || || ||||||||||||||||||||||| ||||| ||
Sbjct 706 TACTTTTCGTAT-AGCGGTGTTGTCACAGAAGAGTGTGATCCATACTTTGATAATACCGG 764
Query 623 TTGCTCTCACCCGGGATGTGAACCCGGT-TACCCTACACCAAAATGTGT-GAGGAAATGT 680
|||||||||||||| || ||||| || || |||||||| |||||| | |||||||||
Sbjct 765 ATGCTCTCACCCGGGTTGCGAACC-GGCATATCCTACACCGAAATGT-TCGAGGAAATGC 822
Query 681 GTTAGCGAAAACCAGCTATGGGGTGAATCAAAACACTATGGTGTCAACGCATACAGAATC 740
|||||||| ||| | |||||| | || || || || || |||| | |||||| |
Sbjct 823 GTTAGCGACAACAAACTATGGAGCGAGTCGAAGCATTACAGTGTTAGTACATACACTGTG 882
Query 741 AA-TCATGACCCTCAAGACATTATGGCAGAGGTTTACAAGAACGGACCTGTCGAGGT-TG 798
|| || | | || ||||| || |||||||||||||| ||||| |||||||| || || |
Sbjct 883 AAATC-TAATCCACAAGATATCATGGCAGAGGTTTATAAGAATGGACCTGTTGAAGTCT- 940
Query 799 CTTTTACCGTTTACGAGGACTTTGCACATTACAAATCAGGAGTGTACAAGCACATAACGG 858
||||||||||||| ||||| ||||| ||||||||||| ||||| || ||||||||||| |
Sbjct 941 CTTTTACCGTTTATGAGGATTTTGCTCATTACAAATCTGGAGTCTATAAGCACATAACAG 1000
Query 859 GTACTAAGATTGGAGGTCATGCTGTTAAGCTTATTGGCTGGGGAACTT-CTGATGACGGC 917
|| |||| |||||||||||||||||||| |||||||| ||||||||| | | ||| ||
Sbjct 1001 GTTCTAACATTGGAGGTCATGCTGTTAAACTTATTGGTTGGGGAACTAGCAG-TGAAGGA 1059
Query 918 GAAGATTATTGGTTGCTTGCAAATCAATGGAACCGAAGCTGGGGTGATGATGGTTACTTC 977
||||||||||||||| | ||||||||||||||| || ||||||||||||||||||| |||
Sbjct 1060 GAAGATTATTGGTTGATGGCAAATCAATGGAACAGAGGCTGGGGTGATGATGGTTATTTC 1119
Query 978 AAGATCAGGAGAGGAACGAACGAATGTGGCATTGAACACGGTGTTGTAGCCGGTTTACCT 1037
| ||| ||||||||||| || |||||||| |||||| | | ||||| ||||| |||
Sbjct 1120 ATGATAAGGAGAGGAACTAATGAATGTGGAATTGAAGATGAACCAGTAGCTGGTTTGCCT 1179
Query 1038 TCA-GACAGGAACGTGTTTAAAGAT-ATAACCACTTCAGA-TGATCTTCTGGTT 1088
||| | || ||| ||||||| | | ||| || ||| || |||||||| ||||
Sbjct 1180 TCAAG-CAAGAATGTGTTTAGGGTTGATA-CCGGTTC-GAATGATCTTCCGGTT 1230
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 55019797320
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5