BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg918913

Length=1219
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT1G01355.1 | Symbols:  | Putative endonuclease or glycosyl hyd...   128    1e-28


> AT1G01355.1 | Symbols:  | Putative endonuclease or glycosyl hydrolase 
| chr1:138513-139568 FORWARD LENGTH=687
Length=687

 Score =  128 bits (69),  Expect = 1e-28
 Identities = 114/135 (84%), Gaps = 6/135 (4%)
 Strand=Plus/Plus

Query  843  GTCGGTCCGTGTATTAAACGGTTTTTGGAG-AATAAAGGCTACTCTGGTCCTCTCACCAT  901
            |||||||||||||| ||||||  ||||||| |||  ||||||||||||||||||||||||
Sbjct  64   GTCGGTCCGTGTATAAAACGGGCTTTGGAGAAAT-TAGGCTACTCTGGTCCTCTCACCAT  122

Query  902  CACTGCCAT-GGGCGCACTAGA-AGACGTCCCTTATGACATCCTGAGAGGAGTCCATTCA  959
            ||||||| | |||   |||| | |||||||||| ||||| |||| |||  ||||||||| 
Sbjct  123  CACTGCCGTTGGGAT-ACTA-ACAGACGTCCCTCATGACTTCCTCAGACAAGTCCATTCC  180

Query  960  AGTGGAATCGCTCTT  974
              |||||||||||||
Sbjct  181  TCTGGAATCGCTCTT  195



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 59889250185


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5