BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg918929
Length=3674
Score E
Sequences producing significant alignments: (Bits) Value
AT1G02730.1 | Symbols: ATCSLD5, CSLD5, SOS6 | cellulose synthas... 5867 0.0
AT2G33100.1 | Symbols: ATCSLD1, CSLD1 | cellulose synthase-like... 340 4e-92
> AT1G02730.1 | Symbols: ATCSLD5, CSLD5, SOS6 | cellulose synthase-like
D5 | chr1:594573-598657 REVERSE LENGTH=3854
Length=3854
Score = 5867 bits (3177), Expect = 0.0
Identities = 3531/3698 (95%), Gaps = 39/3698 (1%)
Strand=Plus/Plus
Query 1 CTGCTAATTGTGAACCGAGA-ATGGTGAAATCAGCAGCTTGT---TCTTCTTCTCCGGTG 56
|||||||||||||||| | | ||||||||||||||||||| | || | |||||||||
Sbjct 165 CTGCTAATTGTGAACC-AAAGATGGTGAAATCAGCAGCTTCTCAGTCACCATCTCCGGTG 223
Query 57 ACTATAACGGTGACACCATGTAAAGGATCCGGCGACAGAAGCTTAGGATTGACGAGTCCT 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 224 ACTATAACGGTGACACCATGTAAAGGATCCGGCGACAGAAGCTTAGGATTGACGAGTCCT 283
Query 117 ATCCCACGCGCCTCTGTTATCAACAATAACCAAAACTCTCCTCTAAGCTCAAGAGCCACG 176
|||||||||||||| || ||| || |||||||||||||||||||||||||||||||||
Sbjct 284 ATCCCACGCGCCTCCGTCATC-AC--CAACCAAAACTCTCCTCTAAGCTCAAGAGCCACG 340
Query 177 CGTCGTACTTCCATTAGCGGCGGAAATCGGAGATCTAGTGGTGGTGAAGGAAGATACTGT 236
||||| |||||||||||| |||| ||||||||||||| |||| ||||||||||||||||
Sbjct 341 CGTCGCACTTCCATTAGCAGCGGGAATCGGAGATCTAACGGTGATGAAGGAAGATACTGT 400
Query 237 TCTATGTCTGTGGAAGATCTAACGGCGGAGACGACTAATTCCGAGTGCGTTTTGAGCTAT 296
||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||
Sbjct 401 TCTATGTCTGTGGAAGATCTAACGGCGGAGACGACTAATTCAGAGTGCGTTCTGAGCTAT 460
Query 297 ACTGTTCATATTCCACCTACGCCGGATCATCAAACGGTGTTCGCTTCACAGGAGAGTGGT 356
||||||||||| |||||||||||||||||||| ||||||||||||||||| | || |
Sbjct 461 ACTGTTCATATCCCACCTACGCCGGATCATCAGACGGTGTTCGCTTCACA-G-GA---G- 514
Query 357 ATGGGTGAAGAAGATGAGATGCTAAAAGGGAATTCAAAT-AACAAAAGTTTCCTCTCTGG 415
| |||||||||| |||||||||||||||||||| ||| || |||||||||||||||||
Sbjct 515 A---GTGAAGAAGACGAGATGCTAAAAGGGAATTCGAATCAA-AAAAGTTTCCTCTCTGG 570
Query 416 GACGATTTTCACCGGTGGGTTTAAATCGGTGACTCGTGGTCATGTTATTGATTGCTCTAT 475
||||||||||||||||||||||||||||||||| ||||||||||| || ||||| |||||
Sbjct 571 GACGATTTTCACCGGTGGGTTTAAATCGGTGACACGTGGTCATGTGATCGATTGTTCTAT 630
Query 476 GGATAGAGCTGATCCGGAGAAGAAATCAGGTCAGATCTGTTGGTTAAAAGGTTGTGATGA 535
|||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct 631 GGATAGAGCTGATCCGGAGAAGAAGTCAGGTCAGATCTGCTGGTTAAAAGGTTGTGATGA 690
Query 536 GAAAGTTGTTCATGGGAGATGTGAGTGTGGTTTCAAAATCTGTAGAGATTGTTACTTTGA 595
|||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 691 GAAAGTTGTTCACGGGAGATGTGAGTGTGGTTTCCGAATCTGTAGAGATTGTTACTTTGA 750
Query 596 TTGTATCACAAGTGGTGGAGGCAATTGTCCTGGTTGCAAAGAGCCTTACAGGGATGTCAA 655
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct 751 TTGTATCACAAGTGGTGGAGGCAATTGTCCTGGTTGCAAAGAGCCTTATAGGGATATCAA 810
Query 656 CGATGATCCAGAAACCGAGGAAGAAGACGAAGAAGATGAGGCGAAACCGCTTCCTCAGAT 715
|||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||
Sbjct 811 CGATGATCCAGAGACTGAGGAAGAAGACGAAGAAGATGAGGCGAAACCACTTCCTCAGAT 870
Query 716 GGGTGAATCAAAGCTTGACAAGAGGCTTTCGGTTGTGAAGTCGTTTAAAGCGCAGAATCA 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 871 GGGTGAATCAAAGCTTGACAAGAGGCTTTCGGTTGTGAAGTCGTTTAAAGCGCAGAATCA 930
Query 776 AGCTGGTGACTTTGATCACACTCGGTGGTTGTTTGAGACTAAAGGTACTTATGGGTATGG 835
|||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 931 AGCTGGAGATTTTGATCATACTCGGTGGTTGTTTGAGACTAAAGGTACTTATGGGTATGG 990
Query 836 GAACGCTGTTTGGCCTAAAGATGGGTATGGAATCGGGTCGGGTGGTGGTGGTAACGGGTA 895
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 991 GAACGCTGTTTGGCCTAAAGATGGGTATGGAATCGGGTCGGGTGGTGGTGGAAACGGGTA 1050
Query 896 TGAAACGCCACCGGAGTTTGGGGAGAGAAGCAAGAGACCTCTTACTAGGAAAGTCAGTGT 955
|||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1051 TGAAACGCCACCTGAGTTTGGGGAGAGAAGCAAGAGGCCTCTTACTAGGAAAGTCAGTGT 1110
Query 956 ATCTGCTGCAATTATCAGTCCTTACAGATTACTCATTGCACTGCGTCTGGTGGCTCTTGG 1015
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CTCTGCTGCAATTATCAGTCCTTACAGATTACTCATTGCACTGCGTCTGGTGGCTCTTGG 1170
Query 1016 TCTGTTCCTGACATGGAGGGTTCGCCACCCAAACCGAGAAGCAATGTGGTTGTGGGGAAT 1075
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1171 TTTGTTCCTGACATGGAGGGTTCGCCACCCAAACCGAGAAGCAATGTGGTTGTGGGGAAT 1230
Query 1076 GTCAACGACCTGTGAGCTTTGGTTTGCCTTGTCTTGGCTTTTGGATCAGCTTCCAAAACT 1135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1231 GTCAACGACCTGTGAGCTTTGGTTTGCCTTGTCTTGGCTTTTGGATCAGCTTCCAAAACT 1290
Query 1136 CTGTCCGGTTAACAGATTAACTGATTTAGGTGTTCTTAAAGAACGCTTTGAATCTCCTAA 1195
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 1291 CTGTCCGGTTAACAGATTAACTGATTTAGGTGTTCTTAAAGAACGCTTTGAGTCTCCAAA 1350
Query 1196 CCTCAGGAACCCCAAAGGAAGATCTGATCTTCCGGGTATCGATGTGTTTGTCTCAACCGC 1255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1351 CCTCAGGAACCCCAAAGGAAGATCTGATCTTCCGGGTATCGATGTGTTTGTCTCAACTGC 1410
Query 1256 AGACCCTGAGAAAGAACCGCCTCTGGTCACAGCCAACACCATTCTTTCGATCCTAGCTGT 1315
|||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||
Sbjct 1411 AGACCCTGAGAAAGAACCACCTCTGGTCACAGCCAACACCATTCTCTCGATCCTTGCTGT 1470
Query 1316 TGATTACCCTGTGGAGAAACTTGCTTGCTACTTATCAGACGATGGAGGAGCTTTGCTAAC 1375
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1471 TGATTACCCTGTGGAGAAACTTGCTTGCTACTTGTCAGACGATGGAGGAGCTTTGCTAAC 1530
Query 1376 ATTCGAGGCCTTGGCTCAAACAGCTAGCTTTGCAAGTACATGGGTGCCATTCTGCAGGAA 1435
||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1531 ATTTGAAGCCTTGGCTCAAACAGCTAGCTTTGCAAGTACATGGGTGCCATTTTGCAGGAA 1590
Query 1436 ACACAATATAGAGCCAAGGAACCCTGAGGCCTACTTTGGACAGAAGCGTAACATTCTCAA 1495
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1591 ACACAATATAGAGCCAAGGAACCCTGAGGCCTACTTTGGACAGAAGCGTAACTTTCTCAA 1650
Query 1496 GAACAAAGTGAGGCTGGATTTTGTGAGGGAAAGGAGGAGAGTCAAGAGAGAGTATGATGA 1555
||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct 1651 GAACAAAGTCAGGCTGGATTTTGTGAGGGAAAGGAGGAGAGTGAAGAGAGAATATGATGA 1710
Query 1556 GTTTAAGGTCAGAATCAACTCATTGCCTGAGGCGATAAGGAGAAGGTCTGATGCTTATAA 1615
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1711 GTTTAAGGTCAGAATCAACTCATTGCCTGAAGCGATAAGGAGAAGGTCTGATGCTTATAA 1770
Query 1616 CGTGCACGAAGAGCTAAGGGCTAAGAAGAAACAGATGGAAATGATGATGGGAAACAATCC 1675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1771 CGTGCACGAAGAGCTAAGGGCTAAGAAGAAACAGATGGAAATGATGATGGGAAACAATCC 1830
Query 1676 TCAAGAAACTGTTAAAGTTCCAAAGGCAACTTGGATGTCAGATGGTTCTCACTGGCCAGG 1735
||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1831 ACAAGAAACTGTTATAGTTCCAAAGGCCACTTGGATGTCAGATGGTTCTCACTGGCCAGG 1890
Query 1736 GACTTGGTCCTCTGGAGAATCCGATAATTCCCGTGGAGATCATGCTGGAATCATTCAGGC 1795
||||||||||||||||||| ||||||| || || ||||||||||||||||||||||||||
Sbjct 1891 GACTTGGTCCTCTGGAGAAACCGATAACTCTCGAGGAGATCATGCTGGAATCATTCAGGC 1950
Query 1796 AATGTTGGCTCCTCCAAATGCAGAACCAGTTTATGGAGCAGAAGCAGATGCTGAGAACTT 1855
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1951 AATGTTGGCTCCTCCAAATGCAGAACCAGTTTATGGAGCTGAAGCAGATGCTGAGAACTT 2010
Query 1856 AATTGATACAACAGACGTTGACATCAGGCTACCAATGCTAGTTTATGTGTCCAGAGAGAA 1915
||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||
Sbjct 2011 AATTGATACAACAGACGTTGACATCAGGCTACCAATGCTGGTCTATGTGTCGAGAGAGAA 2070
Query 1916 GCGGCCGGGTTATGATCACAACAAGAAAGCAGGAGCCATGAATGCTTTGGTTAGAACCAG 1975
||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2071 GCGTCCGGGTTATGACCACAACAAGAAAGCAGGAGCCATGAATGCTTTGGTTAGAACCAG 2130
Query 1976 CGCAATAATGTCTAATGGCCCATTCATCCTCAATCTTGATTGTGACCACTACATCTACAA 2035
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2131 CGCAATTATGTCTAATGGCCCATTCATCCTCAATCTTGATTGTGACCACTACATCTACAA 2190
Query 2036 CTCCATGGCTTTGAGAGAAGGAATGTGCTTCATGCTTGATCGTGGTGGCGATAGAATCTG 2095
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2191 CTCTATGGCTTTGAGAGAAGGAATGTGCTTCATGCTTGATCGTGGTGGCGATAGAATCTG 2250
Query 2096 CTATGTTCAGTTCCCTCAGAGGTTTGAAGGTATTGACCCAAATGATCGTTATGCAAACCA 2155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2251 CTATGTTCAGTTCCCTCAGAGGTTTGAAGGTATTGACCCAAATGATCGTTATGCAAACCA 2310
Query 2156 CAACACTGTCTTCTTTGATGTTAGTATGAGAGCTTTGGATGGACTTCAAGGTCCAATGTA 2215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2311 CAACACTGTCTTCTTTGATGTTAGTATGAGAGCTTTGGATGGACTTCAAGGTCCAATGTA 2370
Query 2216 TGTGGGAACTGGCTGTATCTTCCGAAGAACAGCTCTCTACGGGTTTAGTCCGCCGAGAGC 2275
||||||||||||||| ||||| || ||||||||||| || || ||||| ||||| |||||
Sbjct 2371 TGTGGGAACTGGCTGCATCTTTCGGAGAACAGCTCTTTATGGATTTAGCCCGCCAAGAGC 2430
Query 2276 AACTGAACATCATGGCTGGCTTGGAAGAAGAAAGGTCAAGATATCGCTGAGGAGACCAAA 2335
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2431 AACTGAACATCATGGCTGGCTTGGAAGAAGAAAAGTCAAGATATCGCTGAGGAGACCAAA 2490
Query 2336 AGCCATGATGAAGAAAGACGATGAAGTTTCTTTGCCTATAAATGGAGAATACAACGAAGA 2395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2491 AGCCATGATGAAGAAAGACGATGAAGTTTCTTTGCCTATAAATGGAGAATACAACGAAGA 2550
Query 2396 AGAGAATGACGATGGAGATATTGAATCTCTGCTTCTCCCAAAGAGATTTGGTAACTCAAA 2455
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2551 AGAGAATGATGATGGAGATATTGAATCTCTGCTTCTCCCAAAGAGATTTGGTAACTCAAA 2610
Query 2456 CTCTTTCGTTGCTTCAATCCCGGTTGCTGAATACCAAGGGAGACTCTTACAAGACTTGCA 2515
||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct 2611 CTCTTTCGTTGCTTCAATCCCAGTTGCTGAATACCAAGGGAGACTCATACAAGACTTGCA 2670
Query 2516 AGGCAAAGGCAAGAACAGTAGGCCAGCTGGCTCACTTGCTGTCCCACGTGAACCACTTGA 2575
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2671 AGGCAAAGGCAAGAACAGTAGACCAGCTGGCTCACTTGCTGTCCCACGTGAACCACTTGA 2730
Query 2576 TGCAGCCACTGTAGCCGAAGCAATCAGTGTGATATCTTGCTTCTATGAGGACAAAACTGA 2635
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2731 TGCAGCCACTGTAGCTGAAGCAATCAGTGTGATATCTTGCTTCTATGAGGACAAAACTGA 2790
Query 2636 GTGGGGTAAAAGAGTTGGATGGATCTATGGATCAGTGACTGAAGATGTAGTCACGGGATA 2695
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2791 ATGGGGTAAAAGAGTTGGATGGATCTATGGATCAGTGACTGAAGATGTAGTCACGGGATA 2850
Query 2696 TCGAATGCACAACAGAGGATGGAGATCAATCTATTGCGTGACAAAGCGGGACGCTTTCCG 2755
||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||
Sbjct 2851 TCGAATGCACAACAGAGGATGGAGATCAATCTACTGCGTGACAAAAAGAGACGCTTTCCG 2910
Query 2756 TGGAACAGCTCCAATCAATCTAACGGATAGGCTTCACCAGGTTCTGAGATGGGCAACAGG 2815
|||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2911 TGGAACAGCTCCGATCAATCTAACGGATAGACTTCACCAGGTTCTGAGATGGGCAACAGG 2970
Query 2816 ATCTGTTGAGATCTTTTTCTCTAGGAACAATGCGATCTTCGCAACCAGAAGGATGAAGTT 2875
||||||||||||||| ||||| ||||||||||| || || ||||||||||||||||||||
Sbjct 2971 ATCTGTTGAGATCTTCTTCTCAAGGAACAATGCAATTTTTGCAACCAGAAGGATGAAGTT 3030
Query 2876 TTTGCAGAGAGTGGCTTACTTCAATGTTGGAATGTATCCATTCACATCGCTTTTCCTCAT 2935
|||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct 3031 TTTGCAGAGAGTGGCTTACTTCAACGTTGGAATGTATCCATTCACATCGCTATTCCTCAT 3090
Query 2936 CGTCTACTGCATTCTCCCTGCGGTTTCGCTCTTCTCGGGTCAATTCATAGTCCAATCACT 2995
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 3091 CGTCTACTGCATTCTCCCTGCGATTTCGCTCTTCTCGGGTCAATTCATAGTCCAATCACT 3150
Query 2996 -GAATATAACGTTCTTGATCTATCTCCTCTCGATAACACTCACACTCTGTATGTTATCAC 3054
|| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct 3151 CGAC-ATAACGTTCTTGATCTATCTCCTCTCGATAACACTCACGCTCTGTATGCTATCAC 3209
Query 3055 TCCTTGAGATCAAATGGTCAGGCATAACTCTCCATGAATGGTGGAGAAATGAGCAGTTCT 3114
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 3210 TCCTTGAGATCAAATGGTCAGGCATAACTCTCCATGAATGGTGGAGAAACGAGCAGTTCT 3269
Query 3115 GGGTAATTGGAGGTACAAGCGCACACCCTGCAGCTGTTCTTCAAGGTCTTCTCAAGGTAA 3174
|||| || ||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct 3270 GGGTCATAGGAGGTACAAGCGCACACCCTGCAGCTGTTCTTCAGGGTCTTCTTAAGGTAA 3329
Query 3175 TTGCAGGAGTCGATATCTCGTTTACCTTGACTTCCAAGTCATCTACACCAGAAGAAGGAG 3234
|||||||||| |||||||| |||||||||||||||||||||||| |||||||||| ||||
Sbjct 3330 TTGCAGGAGTTGATATCTCATTTACCTTGACTTCCAAGTCATCTGCACCAGAAGATGGAG 3389
Query 3235 AGGATGAGTTTGCTGATCTGTATGCTGTGAAATGGAGCTTTTTGATGGTTCCTCCATTGA 3294
| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct 3390 ACGATGAGTTTGCGGATCTGTATGTTGTGAAATGGAGCTTTTTGATGGTTCCTCCATTAA 3449
Query 3295 CGATCATGATGGTGAATATGATTGCGATTGCGGTGGGGCTTGCGAGGACTCTGTACAGTC 3354
| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct 3450 CTATCATGATGGTGAATATGATTGCAATTGCGGTGGGGCTAGCGAGGACTCTGTACAGTC 3509
Query 3355 CGTTTCCGCAATGGAGTAAGCTTGTTGGAGGAGTGTTCTTCAGCTTTTGGGTGCTTTGTC 3414
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3510 CGTTTCCACAGTGGAGTAAGCTTGTTGGAGGAGTGTTCTTCAGCTTTTGGGTGCTTTGTC 3569
Query 3415 ATCTGTATCCGTTTGCTAAAGGATTGATGGGAAGAAGAGGCAGAGTTCCGACGATAGTGT 3474
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 3570 ATCTGTATCCGTTTGCTAAAGGATTGATGGGAAGAAGAGGCAGAGTTCCGACCATAGTGT 3629
Query 3475 TTGTGTGGTCAGGTTTGTTGTCGATTATTGTGTCTTTGCTTTGGGTTTATATTAACCCTC 3534
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 3630 TTGTGTGGTCAGGTTTGTTGTCGATTATTGTGTCGTTGCTTTGGGTTTATATTAACCCTC 3689
Query 3535 CTTCAGGGAAACAAGACTATATGCAGTTTCAGTTCCCTTGATT-TTC----TTTGTTT-- 3587
||||||||||||| ||||||||||||||||| ||||||||||| || ||| |||
Sbjct 3690 CTTCAGGGAAACAGGACTATATGCAGTTTCAATTCCCTTGATTCTTAAGAGTTTTTTTTC 3749
Query 3588 ----GTGGTACAAGGCATGAAAGTTCTTCTTTCTAGGCTTCA---T----GTTTGTAATC 3636
|||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct 3750 TTTCGTGGTACAAGGCATGAAAGTTCTTCTTTCTAGGCTTCAGCCTTCATGTTTGTAATC 3809
Query 3637 AGATATTATAATTACGATTTTTCAAAGTAAAGTCTCAA 3674
||||||||||||||||||||||||||||||||||||||
Sbjct 3810 AGATATTATAATTACGATTTTTCAAAGTAAAGTCTCAA 3847
> AT2G33100.1 | Symbols: ATCSLD1, CSLD1 | cellulose synthase-like
D1 | chr2:14036319-14040044 REVERSE LENGTH=3286
Length=3286
Score = 340 bits (184), Expect = 4e-92
Identities = 727/981 (74%), Gaps = 69/981 (7%)
Strand=Plus/Plus
Query 2571 CTTGATGCAGCC-ACTGTAGCCGAAGCAATCAG-TGTGATATCTTGCTTCTATGAGGACA 2628
|||||||| || || || || ||||| ||| | ||| || ||||||| ||||| ||||
Sbjct 2113 CTTGATGC-TCCAACAGTGGCTGAAGCCATC-GCTGTCATTTCTTGCTGGTATGAAGACA 2170
Query 2629 AAACTGAGTGGGGTA-AAAGAGTTGGATGGATCTATGGATCAGTGACTGAAGATGTAGTC 2687
| ||||| ||||| | | ||| | |||||||| || || || || || ||||| || ||
Sbjct 2171 ATACTGAATGGGG-AGATAGAATCGGATGGATTTACGGGTCGGTCACGGAAGACGTGGTG 2229
Query 2688 ACGGGATATCGAATGCACAACAGAGGATGGAGATCAATCTATTGCGTGACAAAGCGGGAC 2747
|| || ||||| ||||| ||| | || ||| | || | || ||| | ||||| || ||
Sbjct 2230 ACAGGTTATCGTATGCATAACCGTGGTTGGCGGTCCGTTTACTGCATCACAAAACGTGAT 2289
Query 2748 GCTTTCCGTGGAACAGCTCCAATCAATCTAACGGATAGGCTTCACCAGGTTCTGAGATGG 2807
||||||||||| ||||||||||||||||| || || | || || || ||||| | |||
Sbjct 2290 GCTTTCCGTGGCACAGCTCCAATCAATCTCACTGACCGTCTCCATCAAGTTCTCCGTTGG 2349
Query 2808 GCAACAGGATCTGTTGAGATCTTTTTCTCTAGGAACAATGCGATCTTCGCAACCAGAAGG 2867
|| ||||| ||||| || ||||||||||| | ||||||||| || ||||| |||||||||
Sbjct 2350 GCCACAGGCTCTGTAGAAATCTTTTTCTCCAAGAACAATGCCATGTTCGCCACCAGAAGG 2409
Query 2868 ATGAAGTTTTTGCAGAGAGTGGCTTACTTCAATGTTGGAATGTATCCATTCACATCGC-T 2926
| |||||| | ||| |||| || ||| ||||||| || || || || ||||| || | |
Sbjct 2410 CTCAAGTTTCTCCAGCGAGTCGCCTACCTCAATGTCGGGATCTACCCTTTCACTTC-CAT 2468
Query 2927 TTTCCTCATCGTCTACTGCATT-CTCCCTGCGGTTTC-G-CTCTTCTCG-GGTCAATTCA 2982
||| | ||||||| ||| || |||||||| | || | |||||| | || ||||||
Sbjct 2469 CTTCTTGGTCGTCTATTGC-TTCCTCCCTGC--TCTCTGTCTCTTC-AGCGGAAAATTCA 2524
Query 2983 TAGTCCA-ATCACT-GAATAT-AACGTTCTTGAT-CTATCTCCTCTCG-ATAACAC-TCA 3036
| ||||| | | || | |||| || ||| | | ||| || |||| | || || | | |
Sbjct 2525 TCGTCCAGAGC-CTCG-ATATCCAC-TTCCT-CTCCTACCTTCTCT-GCATCAC-CGTAA 2578
Query 3037 CACT--CTGTATGTTATCACTCCTTGAGATCAAATGGTCAGGCATAACTCTCCATGAATG 3094
| || | || | |||||||| ||| |||||||||| || || || | |||||
Sbjct 2579 CCCTAACCCTA--ATCTCACTCCTCGAGGTCAAATGGTCGGGAATCGGACTGGAAGAATG 2636
Query 3095 GTGGAGAAATGAGCAGTTCTGGGTAATTGGAGGTACAAGCGCACACCCTGCAGCTGTTC- 3153
|||||||||||| ||||| ||| |||| ||||| |||||||| || | |||||| | ||
Sbjct 2637 GTGGAGAAATGAACAGTTTTGGTTAATCGGAGGCACAAGCGCTCATCTTGCAGCAG-TCG 2695
Query 3154 TTCAAGGTCTT-CTCAAGGTAATTGCAGGAGTCGATATCTCGTTTACCTTGACTTC-CAA 3211
|||||||| || ||||| || || || ||| |||| ||||| || ||| |||| || ||
Sbjct 2696 TTCAAGGT-TTGCTCAAAGTTATAGCCGGAATCGAAATCTCCTTCACCCTGACATCGAAA 2754
Query 3212 GTCATCTACACCAGAAGAAGGAGAGGATGA-GTTTGCTGATCTGTATGCTGTGAAATGG- 3269
| | || || |||||| | ||| || | ||||| ||||| || ||||||||||
Sbjct 2755 G-C--CT-CAGGAGAAGACGAAGACGA-CATCTTTGCGGATCTTTACATTGTGAAATGGA 2809
Query 3270 -A-GCTTTTTGATGGTTCCTCCATTGACGATCATGATGGTGAA--TATGATTGCGATTGC 3325
| |||| || || | || | || || ||||| || || || | || ||||||| |
Sbjct 2810 CAGGCTTATTCATCATGCC-GC-TT-ACAATCATCATAGTCAACCT-TG-TTGCGATAGT 2864
Query 3326 G-GTGGGGCTTGCGAGGACTCTGTACAGTCCGTTTCCGCAATGGAGTAAGCTT-GTTGGA 3383
| ||| |||| |||| || | |||||| | ||||||||||| | ||| || | |||
Sbjct 2865 GATTGGAGCTT-CGAGAACAATATACAGTGTGATTCCGCAATGGGGCAAG-TTAATGGGA 2922
Query 3384 GGAGTGTTCTTCAGCTTT-TGGGTGCTTTG--TCATCTGTATCCGTTTGCTAAAGGATTG 3440
||| | ||||| || ||| ||||| | ||| |||| |||||||||||||||||||||||
Sbjct 2923 GGAATATTCTTTAG-TTTATGGGT-C-TTGACTCATATGTATCCGTTTGCTAAAGGATTG 2979
Query 3441 ATGGGAAGAAGAGGCAGAG-TTCCGACGATAGTGTT-TGTGTGGTCAGGT-TTGTTGTCG 3497
||||| ||||||| | || |||| ||||| || || ||| ||||| || |||| ||||
Sbjct 2980 ATGGGTCGAAGAGGAA-AGGTTCCAACGATTGT-TTATGTTTGGTCCGGGCTTGT-GTCG 3036
Query 3498 ATTATTGTGTCTTTGCTTTGG 3518
|||| || || ||||||||
Sbjct 3037 ATTACCGTCTCGCTGCTTTGG 3057
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 182958841121
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5