BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg918965 Length=350 Score E Sequences producing significant alignments: (Bits) Value AT1G03020.1 | Symbols: | Thioredoxin superfamily protein | chr... 499 6e-141 > AT1G03020.1 | Symbols: | Thioredoxin superfamily protein | chr1:698207-698515 REVERSE LENGTH=309 Length=309 Score = 499 bits (270), Expect = 6e-141 Identities = 297/310 (96%), Gaps = 2/310 (1%) Strand=Plus/Plus Query 21 ATGGAGAAGATATCAAATTTGTTAGAAGACAAGCCAGTGGTGATATTCAGCAAGACCTCG 80 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct 1 ATGGAGAAGATATCAAATTTGTTAGAAGACAAGCCCGTGGTGATATTCAGCAAGACGTCC 60 Query 81 TGCTGTATGAGTCACACGATCAAGTCGCTCATATCTGGTTACGGTGCGAATCCAACGGTG 140 ||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||| ||| Sbjct 61 TGCTGTATGAGTCACTCGATCAAGTCGCTTATATCTGGTTACGGTGCGAATTCAACAGTG 120 Query 141 TATGAGCTAGACGAAATGTCTAATGGATCC-GAGATCGAACGAGCACTGGTCGAGCTTGG 199 ||||||||||||||||||||||||||| || ||||||||||||||||| || |||||||| Sbjct 121 TATGAGCTAGACGAAATGTCTAATGGA-CCAGAGATCGAACGAGCACTTGTAGAGCTTGG 179 Query 200 GTGCAAACCGACGGTGCCAGCTGTCTTTATAGGGCAAGAGCTCGTAGGTGGTGCAAATCA 259 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 180 GTGCAAACCGACTGTGCCAGCTGTCTTTATAGGGCAAGAGCTCGTAGGTGGTGCAAATCA 239 Query 260 ACTTATGTCTCTTCAAGTCAGGAACCAACTAGCCTCGTTGCTCCGAAGAGCTGGAGCCAT 319 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 240 ACTTATGTCTCTTCAAGTCAGGAACCAACTAGCTTCGTTGCTCCGAAGAGCTGGAGCCAT 299 Query 320 ATGGATTTAA 329 |||||||||| Sbjct 300 ATGGATTTAA 309 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 16387286174 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5