BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg919016
Length=1354
Score E
Sequences producing significant alignments: (Bits) Value
AT1G03940.1 | Symbols: | HXXXD-type acyl-transferase family pr... 1840 0.0
AT1G03495.1 | Symbols: | HXXXD-type acyl-transferase family pr... 1821 0.0
> AT1G03940.1 | Symbols: | HXXXD-type acyl-transferase family
protein | chr1:1009542-1011056 REVERSE LENGTH=1515
Length=1515
Score = 1840 bits (996), Expect = 0.0
Identities = 1155/1233 (94%), Gaps = 6/1233 (0%)
Strand=Plus/Plus
Query 105 GACTTTGTACCCAACCTCAAACAATCACC-CTCCATCACTCTCCAACATTTCTTCCCTTA 163
||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||
Sbjct 286 GACTTTGTACCCAACCTCAAACATTC-CCTCTCCATCACTCTCCAACATTTCTTCCCTTA 344
Query 164 CGCCGGTAAACTGATCATCCTGTCTCGTCCCGACCCTCCATACTTACAGTACAATGATGG 223
||||||||||||||| |||| | ||||||||||||||||||| ||||| ||||| |||||
Sbjct 345 CGCCGGTAAACTGATTATCCCGCCTCGTCCCGACCCTCCATATTTACACTACAACGATGG 404
Query 224 CGAAGACTCTCTTGTTTTCACTGTAGCAGAGTCTACTGAAACCGACTTCAACCAACTGAA 283
| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct 405 CCAAGACTCTCTTGTTTTCACCGTAGCAGAGTCTACTGAAACCGACTTCGACCAACTGAA 464
Query 284 AACTGATTCCCCTAAAGATATCAGGGTGTTGCATGGCGTCTTGCCCAAGTTACCTCCTCC 343
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 465 GTCTGATTCCCCTAAAGATATCAGTGTGTTGCATGGCGTCTTGCCCAAGTTACCTCCTCC 524
Query 344 TCATGTCTCTCCGGAAGGAATTCAGATGCCG-CCAATAATGGCGATGCAAGTCACCATCT 402
||| |||||||||||||||||||||||| || ||||||||||| ||||||||||||||||
Sbjct 525 TCACGTCTCTCCGGAAGGAATTCAGATG-CGACCAATAATGGCTATGCAAGTCACCATCT 583
Query 403 TCCCTGGAGCCGGAATCTGTATAGGCAACTCAGCTACACATGTTGTAGCGGATGGAGTCA 462
|||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 584 TCCCTGGAGCTGGAATCTGTATAGGCAACTCAGCTACACATGTTGTAGCAGATGGAGTCA 643
Query 463 CCTTCAGTCACTTCATGAAGTATTGGATGTCACTGACCAAATCCAACGGCAAAGATCCTG 522
|||||||||| ||||||||||||||||||||| |||||||||||| ||| |||||||| |
Sbjct 644 CCTTCAGTCATTTCATGAAGTATTGGATGTCATTGACCAAATCCAGCGGTAAAGATCCCG 703
Query 523 CCACGGTTCTTCTACCCCCTCTGCCTATTCACAGCTGCAGAAACATGATCAAGGACCCAG 582
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 704 CCACGGTTCTTCTACCCTCTCTGCCTATTCACAGCTGCAGAAACATGATCAAGGACCCAG 763
Query 583 GAGAGGTAGGCGCAGGACATTTGGAGCGGTTTTGGAGCCAAAACTCTGGAAAAAACAGTT 642
| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct 764 GCGAGGTAGGCGCAGGACATTTGGAGCGGTTTTGGAGCCAAAACTCTGCAAAACACAGTT 823
Query 643 CACATGTTACGCCTGAGAACATGGTTAGAGCTACTTTTACAATGAGCCGGAATCAGATAG 702
||||||||||||||||||||||||| ||||| ||||||||| |||||||||| |||||||
Sbjct 824 CACATGTTACGCCTGAGAACATGGTCAGAGCCACTTTTACATTGAGCCGGAAGCAGATAG 883
Query 703 ACAATCTCAAGAGCTGGGTTAAAGAGCAGTCTGAGAATCAATCTCCTGTTTCTACCTTCG 762
| ||||| || || ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 884 ATAATCTAAAAAGTTGGGTTACAGAGCAGTCTGAGAATCAATCTCCTGTTTCTACCTTCG 943
Query 763 TGGTAACTCTAGCTCTCATTTGGGTAAGCTTGATGAAGACAATTGTTCAAGACAGTGAAA 822
|||| ||||||||| ||||||||||||||||||| |||||| |||| |||||||||||||
Sbjct 944 TGGTGACTCTAGCTTTCATTTGGGTAAGCTTGATCAAGACACTTGTACAAGACAGTGAAA 1003
Query 823 CAGAGGCTAAGGAGGAAGACAAAGACGAAGTCTTTCACTTGATGATCAATGTGGATTGCA 882
|| |||| || ||||||||||| || ||||| ||||||||||||||||||||||||||||
Sbjct 1004 CAAAGGCCAACGAGGAAGACAAGGATGAAGTATTTCACTTGATGATCAATGTGGATTGCA 1063
Query 883 GGAATCGTCTCAAGTACACACAACCAATACCACAAACATACTTTGGCAACTGCATGGCTC 942
||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1064 GGAATCGCCTCAAGTACACACAACCAATACCACAAACATACTTTGGCAACTGTATGGCTC 1123
Query 943 CTGGGATCGTATCTGTCAAGAAACGA-GATTTGTTAGGAGAAAAATGCGTTTTGGCTGCT 1001
|||| |||||||| |||||||||| | |||||| |||||||||||||||||||||| |||
Sbjct 1124 CTGGTATCGTATCAGTCAAGAAAC-ACGATTTGCTAGGAGAAAAATGCGTTTTGGCGGCT 1182
Query 1002 TCAGACGCAATCACAGCGAGAATCAAAGATATGTTATCAAGCGATCTACTGAAAACAGCA 1061
||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct 1183 TCAGATGCAATCACAGCGAGAATCAAAGATATGTTATCAAGCGATCTGTTGAAGACAGCA 1242
Query 1062 CCAACATGGGGACAAGGAGTACGTAAATGGGTCATGTCCCGTTTTCCAACCTCAATAGCA 1121
|||| ||||||||||||||||||||||||||||||||||| || |||||||||||| |||
Sbjct 1243 CCAAGATGGGGACAAGGAGTACGTAAATGGGTCATGTCCCATTATCCAACCTCAATTGCA 1302
Query 1122 GGAGCTCCGAAATTGGGACTGTATGATATGGATTTTGGGTTAGGAAAGCCCTGCAAAATG 1181
|||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct 1303 GGAGCTCCGAAATTGGGACTGTATGACATGGATTTTGGATTAGGAAAGCCCTGCAAAATG 1362
Query 1182 GAGATAGTGCACATAGAAACAGGTGGTTCAATCGCATTCTCAGAGTCCAGAGATGGCAGT 1241
||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 1363 GAGATCGTGCACATAGAAACAGGTGGTTCTATCGCATTCTCAGAGTCCAGAGACGGCAGC 1422
Query 1242 AATGGAGTTGAGATTGGAATAGCACTGGAAAAGAAGAAAATGGAAGTATTTGGCTCAATT 1301
|||||||||||||||||||||||||| || |||||||||||||| || |||| |||||||
Sbjct 1423 AATGGAGTTGAGATTGGAATAGCACTAGAGAAGAAGAAAATGGATGTGTTTGACTCAATT 1482
Query 1302 CTACAACAGGGGATCAAGAAATTCGAAACGTAG 1334
||||||||||||||||||||||||| |||||||
Sbjct 1483 CTACAACAGGGGATCAAGAAATTCGCAACGTAG 1515
> AT1G03495.1 | Symbols: | HXXXD-type acyl-transferase family
protein | chr1:873184-874935 FORWARD LENGTH=1753
Length=1753
Score = 1821 bits (986), Expect = 0.0
Identities = 1168/1254 (93%), Gaps = 20/1254 (2%)
Strand=Plus/Plus
Query 105 GACTTTGTACCCAACCTCAAACAATCACC-CTCCATCACTCTCCAACATTTCTTCCCTTA 163
||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||
Sbjct 433 GACTTTGTACCCAACCTCAAACATTC-CCTCTCCATCACTCTCCAACATTTCTTCCCTTA 491
Query 164 CGCCGGTAAACTGATCATCCTGTCTCGTCCCGACCCTCCATACTTACAGTACAATGATGG 223
||||||||||||||| |||| | ||||||||||||||||||| ||||| ||||| | |||
Sbjct 492 CGCCGGTAAACTGATTATCCCGCCTCGTCCCGACCCTCCATATTTACACTACAACGCTGG 551
Query 224 CGAAGACTCTCTTGTTTTCACTGTAGCAGAGTCTACTGAAACCGACTTCAACCAACTGAA 283
||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct 552 CGAAGACTCTCTTGTTTTCACCGTAGCAGAGTCTACTGAAACCGACTTCGACCAACTGAA 611
Query 284 AACTGATTCCCCTAAAGATATCAGGGTGTTGCATGGCGTCTTGCCCAAGTTACCTCCTCC 343
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 612 GTCTGATTCCCCTAAAGATATCAGTGTGTTGCATGGCGTCTTGCCCAAGTTACCTCCTCC 671
Query 344 TCATGTCTCTCCGGAAGGAATTCAGATGCCG-CCAATAATGGCGATGCAAGTCACCATCT 402
||| ||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||
Sbjct 672 TCACGTCTCTCCGGAAGGAATTCAGATGC-GACCAATAATGGCAATGCAAGTCACCATCT 730
Query 403 TCCCTGGAGCCGGAATCTGTATAGGCAACTCAGCTACACATGTTGTAGCGGATGGAGTCA 462
|||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 731 TCCCTGGAGCTGGAATCTGTATAGGCAACTCAGCTACACATGTTGTAGCAGATGGAGTCA 790
Query 463 CCTTCAGTCACTTCATGAAGTATTGGATGTCACTGACCAAATCCAACGGCAAAGATCCTG 522
|||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||| |
Sbjct 791 CCTTCAGTCATTTCATGAAGTATTGGATGTCATTGACCAAATCCAGCGGCAAAGATCCGG 850
Query 523 CCACGGTTCTTCTACCCCCTCTGCCTATTCACAGCTGCAGAAACATGATCAAGGACCCAG 582
||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct 851 CCACGGTTCTTCTACCCTCTCTGCCTATTCACAGCTGCAGAAACATAATCAAGGACCCAG 910
Query 583 GAGAGGTAGGCGCAGGACATTTGGAGCGGTTTTGGAGCCAAAACTCTGGAAAAAACAGTT 642
||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct 911 GAGAGGTAGCCGCAGGACATTTGGAGCGGTTTTGGAGCCAAAACTCTGCAAAACACAGTT 970
Query 643 CACATGTTACGCCTGAGAACATGGTTAGAGCTACTTTTACAATGAGCCGGAATCAGATAG 702
||||||||||||||||||||||||| ||||| ||||||||| |||||||||| |||||||
Sbjct 971 CACATGTTACGCCTGAGAACATGGTCAGAGCCACTTTTACATTGAGCCGGAAGCAGATAG 1030
Query 703 ACAATCTCAAGAGCTGGGTTAAAGAGCAGTCTGAGAATCAATCTCCTGTTTCTACCTTCG 762
||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1031 ACAATCTCAAGAGTTGGGTTACAGAGCAGTCTGAGAATCAATCTCCTGTTTCTACCTTCG 1090
Query 763 TGGTAACTCTAGCTCTCATTTGGGTAAGCTTGATGAAGACAATTGTTCAAGACAGTGAAA 822
|||| ||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||
Sbjct 1091 TGGTGACTCTAGCTTTCATTTGGGTAAGCTTGATTAAGACACTTGTTCAAGACAGTGAAA 1150
Query 823 CAGAGGCTAAGGAGGAAGACAAAGACGAAGTCTTTCACTTGATGATCAATGTGGATTGCA 882
||||||| ||||| | || | |||||||||||||||||||| ||||||||||
Sbjct 1151 CAGAGGCCAAGGA------C---GA--A-GTCTTTCACTTGATGATCAACGTGGATTGCA 1198
Query 883 GGAATCGTCTCAAGTACACACAACCAATACCACAAACATACTTTGGCAACTGCATGGCTC 942
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1199 GGAATCGTCTCAAGTACACACAACCAATACCACAAACATACTTTGGCAACTGTATGGCTC 1258
Query 943 CTGGGATCGTATCTGTCAAGAAACGA-GATTTGTTAGGAGAAAAATGCGTTTTGGCTGCT 1001
|||| |||||||| |||||||||| | |||||| |||||||||||||||| ||||||||
Sbjct 1259 CTGGTATCGTATCAGTCAAGAAAC-ACGATTTGCTAGGAGAAAAATGCGTCATGGCTGCT 1317
Query 1002 TCAGACGCAATCACAGCGAGAATCAAAGATATGTTATCAAGCGATCTACTGAAAACAGCA 1061
||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct 1318 TCAGATGCAATCACAGCGAGAATCAAAGATATGTTATCAAGCGATCTGTTGAAGACAGCA 1377
Query 1062 CCAACATGGGGACAAGGAGTACGTAAATGGGTCATGTCCCGTTTTCCAACCTCAATAGCA 1121
|||| ||||||||||||||||||||||||||||||||||| || |||||||||||| |||
Sbjct 1378 CCAAGATGGGGACAAGGAGTACGTAAATGGGTCATGTCCCATTATCCAACCTCAATTGCA 1437
Query 1122 GGAGCTCCGAAATTGGGACTGTATGATATGGATTTTGGGTTAGGAAAGCCCTGCAAAATG 1181
|||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct 1438 GGAGCTCCGAAATTGGGACTGTATGACATGGATTTTGGATTAGGAAAGCCCTGCAAAATG 1497
Query 1182 GAGATAGTGCACATAGAAACAGGTGGTTCAATCGCATTCTCAGAGTCCAGAGATGGCAGT 1241
||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 1498 GAGATAGTGCACATAGAAACAGGTGGTTCTATCGCATTCTCAGAGTCCAGAGACGGCAGC 1557
Query 1242 AATGGAGTTGAGATTGGAATAGCACTGGAAAAGAAGAAAATGGAAGTATTTGGCTCAATT 1301
|||||||||||||||||||||||||| || |||||||||||||| || |||| |||| ||
Sbjct 1558 AATGGAGTTGAGATTGGAATAGCACTAGAGAAGAAGAAAATGGATGTGTTTGACTCACTT 1617
Query 1302 CTACAACAGGGGATCAAGAAATTCGAAACGTAGCAGCCC-TTTAGTCATCCAAT 1354
|||||| |||||||||||||||||| ||||||||||||| ||| |||||||||
Sbjct 1618 CTACAAAAGGGGATCAAGAAATTCGCAACGTAGCAGCCCCTTTC-TCATCCAAT 1670
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 66666323760
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5