BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg919093
Length=1442
Score E
Sequences producing significant alignments: (Bits) Value
AT1G04170.1 | Symbols: EIF2 GAMMA | eukaryotic translation init... 2374 0.0
AT4G18330.2 | Symbols: | Translation elongation factor EF1A/in... 1236 0.0
AT2G18720.1 | Symbols: | Translation elongation factor EF1A/in... 1024 0.0
> AT1G04170.1 | Symbols: EIF2 GAMMA | eukaryotic translation initiation
factor 2 gamma subunit | chr1:1096946-1099898 FORWARD
LENGTH=1793
Length=1793
Score = 2374 bits (1285), Expect = 0.0
Identities = 1388/1439 (96%), Gaps = 2/1439 (0%)
Strand=Plus/Plus
Query 1 GAGAAGAAGCTTCAATCTTTGATAATGTCGAGGAACAAAGGTTTGGCTGAGCAAGATCTT 60
||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 176 GAGCAGAAGCTTCAATCTTTGATAATGTCGAGGAACAAGGGTTTGGCTGAGCAAGATCTT 235
Query 61 AAAAAATTGGATGTAACTGTGCTACATCCTTTGTCCCCTGAGGTCATTTCTCGCCAGGCC 120
|||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct 236 AAAAAATTGGATGTAACTGTGCTACATCCTCTGTCTCCTGAGGTCATTTCTCGCCAGGCC 295
Query 121 ACTATTAATATAGGAACCATTGGCCATGTCGCTCATGGAAAGTCCACTGTTGTGAAAGCT 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 296 ACTATTAATATAGGAACCATTGGTCATGTCGCTCATGGAAAGTCCACTGTTGTTAAAGCT 355
Query 181 ATTTCTGGTGTCCAGACTGTCCGTTTTAAGAATGAATTGGAGCGTAACATTACCATTAAG 240
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 356 ATTTCTGGTGTCCAGACTGTCCGTTTTAAAAATGAATTGGAGCGTAACATTACCATTAAG 415
Query 241 CTTGGATATGCAAATGCTAAGATTTACAAATGTGAGGATGAGAAATGCCCTAGACCAATG 300
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct 416 CTTGGATATGCAAACGCCAAGATTTACAAATGTGAGGATGAGAAATGCCCTAGACCAATG 475
Query 301 TGCTACAAGGCCTACGGAAGTGGAAAAGAAGACACTCCAAATTGTGATGTCCCCGGATTT 360
|||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct 476 TGCTACAAGGCCTACGGAAGTGGAAAGGAAGACACTCCCAATTGTGATGTCCCCGGATTT 535
Query 361 GAAAACTCCAAGATGAAACTATTGAGGCATGTGTCATTCGTGGATTGCCCGGGACACGAT 420
|||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct 536 GAAAACTCCAAGATGAAACTATTGAGGCATGTCTCATTCGTTGATTGCCCGGGTCACGAT 595
Query 421 ATTCTCATGGCAACAATGCTTAACGGAGCAGCCATCATGGATGGTGCACTACTCTTAATC 480
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 596 ATTCTCATGGCAACAATGCTTAATGGAGCAGCCATCATGGATGGTGCACTACTTTTAATC 655
Query 481 GCTGCAAATGAGACGTGTCCGCAACCACAAACGTCTGAACATCTTGCTGCCGTCGAGATT 540
||||||||||| || ||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 656 GCTGCAAATGAAACTTGTCCACAACCACAAACGTCTGAACATCTTGCTGCCGTTGAGATT 715
Query 541 ATGCAA-TTGAAGCATATCATCATCCTTCAGAACAAGATTGATCTTATTCAAGAGAACGT 599
|||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 716 ATGCAACTT-AAGCATATCATCATCCTTCAGAACAAGATTGATCTTATTCAAGAGAATGT 774
Query 600 TGCCATTAATCAGCACGAGGCAATTCAGAAATTTATAATGAACACTGTTGCGGATGCTGC 659
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 775 TGCCATTAATCAGCACGAGGCAATTCAGAAATTTATAATGAACACTGTTGCTGATGCTGC 834
Query 660 TCCAATCGTCCCCGTCTCAGCACAACTGAAATACAACATCGATGTTGTGTGCGAGTACAT 719
||| |||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 835 TCCGATCGTCCCTGTCTCAGCACAACTGAAATACAACATTGATGTGGTGTGCGAGTACAT 894
Query 720 AGTCAAGAAGATCCCAATCCCTGAGAGGAATTTTGTGTCACCCCCAAATATGATAGTGAT 779
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 895 TGTCAAGAAGATCCCAATCCCTGAGAGGAATTTTGTGTCACCCCCAAATATGATAGTGAT 954
Query 780 TCGATCTTTTGATGTCAACAAACCTGGTTATGAGGTTGATGAGATTAAAGGTGGAGTTGC 839
||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 955 TCGGTCTTTTGATGTCAACAAACCTGGTTATGAGGTTGATGAGATCAAAGGTGGAGTTGC 1014
Query 840 AGGTGGAAGTATCCTCCGGGGTGTTTTGAAAGTCAACCAATTAATTGAAATCCGACCTGG 899
||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct 1015 AGGTGGAAGTATCCTACGGGGTGTTTTGAGAGTCAACCAATTAATCGAAATCCGACCTGG 1074
Query 900 TATCGTTACAAAAGACGAGCGTGGCAACTCAAAATGCACTCCAATTTACTCTCGCATAAT 959
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1075 TATCGTTACCAAAGACGAGCGTGGCAACTCAAAATGCACTCCAATTTACTCTCGCATCAT 1134
Query 960 CTCACTCTACGCGGAACAGAACGAGCTTCAGTTTGCTGTTCCTGGGGGTCTAATAGGAGT 1019
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1135 TTCACTCTACGCGGAACAGAACGAGCTTCAGTTTGCTGTTCCTGGAGGTCTAATAGGAGT 1194
Query 1020 TGGGACAACAATGGACCCAACTCTTACTCGTGCAGATCGATTAGTTGGTCAAGTCCTTGG 1079
||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1195 TGGAACAACAATGGACCCAACTCTCACTCGTGCAGATCGATTAGTTGGTCAAGTCCTTGG 1254
Query 1080 TGAAATCGGTTCACTTCCTGATGTCTTTGTTGAACTCGAGGTTAACTTCTTTCTTCTACG 1139
|||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct 1255 TGAAATCGGTTCACTTCCTGATGTATTTGTTGAACTCGAGGTGAACTTCTTTCTTCTACG 1314
Query 1140 ACGTTTGTTGGGAGTGAGAACAAAGGGATCAGAGAAACAAGGGAAGGTGTCAAAGCTAAC 1199
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1315 ACGTTTGTTGGGAGTGAGAACAAAGGGATCAGAGAAACAAGGGAAAGTGTCAAAGCTAAC 1374
Query 1200 GAAGGGAGAGATTCTGATGCTCAACATTGGTTCTATGTCCACTGGAGCCAAAGTTGTGGG 1259
||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct 1375 GAAAGGAGAGATTCTGATGCTCAACATTGGTTCGATGTCCACTGGAGCCAAAGTTGTAGG 1434
Query 1260 AGTTAAAGTCGATCTGGCTAAACTGCAACTGACAGCGCCGGTTTGTACCAGCAAAGGAGA 1319
||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct 1435 AGTTAAAGTCGATCTGGCTAAACTGCAACTGACTGCGCCTGTTTGTACCAGCAAAGGAGA 1494
Query 1320 GAAAGTGGCTCTAAGCAGGCGTGTGGAAAAGCATTGGCGTTTGATTGGTTGGGGTCAGAT 1379
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1495 GAAAGTGGCTCTAAGCAGACGTGTGGAAAAGCATTGGCGTTTGATTGGTTGGGGTCAGAT 1554
Query 1380 TCAAGCTGGAACCACCATTGAAGTTCCTCCTTCACCTTTCTAAGCTGTGTGTTATTTTT 1438
|||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct 1555 TCAAGCTGGAACCACCATCGAAGTTCCTCCTTCACCTTTCTAAGCTATGTGTTATTTTT 1613
> AT4G18330.2 | Symbols: | Translation elongation factor EF1A/initiation
factor IF2gamma family protein | chr4:10126579-10128734
FORWARD LENGTH=1659
Length=1659
Score = 1236 bits (669), Expect = 0.0
Identities = 1193/1443 (83%), Gaps = 48/1443 (3%)
Strand=Plus/Plus
Query 4 AAGAAGCTTCAATCTTTGATAATGTCGAGGAACAAAGGTTTGGCTGAGCAAGATCTTAA- 62
|||| | |||||||| || |||| ||| | ||||| |||||||| |||||||||| |||
Sbjct 94 AAGATGGTTCAATCTGTGTTAATTTCGCGTAACAAGGGTTTGGCGGAGCAAGATC-TAAC 152
Query 63 -AAAATTGGATGTAACTGTGCTACATCCTTTGTCCCCTGAGGTCATTTCTCGCCAGGCCA 121
|| || |||||||| | |||||||| ||| ||||| |||||||||||||| || |
Sbjct 153 TAAGCTT-GATGTAACAAAGTTACATCCTCTGTTTCCTGAAGTCATTTCTCGCCAAGCAA 211
Query 122 CTATTAATATAGGAACCATTGGCCATGTCGCTCATGG-AAAGTCCACTGTTGTGAAAGCT 180
| || ||||| ||||||||||| ||||||||||| || ||| || ||| | |||||||||
Sbjct 212 CCATAAATATCGGAACCATTGGTCATGTCGCTCACGGTAAA-TCGACTATAGTGAAAGCT 270
Query 181 ATTTCTGGTGTCCAGACTGTCCGTTTTAAGAATGAATTGGAGCGTAACATTACCATTAAG 240
|| |||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 271 ATCTCTGGTGTTCAGACTGTGCGTTTTAAGAATGAATTAGAGCGTAACATTACCATTAAG 330
Query 241 CTTGGATATGCAAATGCTAAGATTTACAAATGTGAGGATGAGAAATGCCCTAGACCAATG 300
||||| ||||||||||| ||||||||||| ||||||||||| || |||||||||||||||
Sbjct 331 CTTGGTTATGCAAATGCAAAGATTTACAAGTGTGAGGATGACAAGTGCCCTAGACCAATG 390
Query 301 TGCTACAAGGCCTACGGAAGTGGAAAAGAAGAC-ACTCCAAATTGTGATGTCCCCGGATT 359
||||||||| | || || ||||||||||||||| || |||| ||||||||||||||||||
Sbjct 391 TGCTACAAGTCATATGGGAGTGGAAAAGAAGACAAC-CCAACTTGTGATGTCCCCGGATT 449
Query 360 TGAAAACTCCAAGATGAAACTATTGAGGCATGTGTCAT-TCGTGGATTGCCCGGGACACG 418
||| || | |||||||| |||| ||| ||||| |||| | || ||||| |||||||| |
Sbjct 450 TGAGAATTGCAAGATGACACTACGGAGACATGTCTCATGT-GTCGATTGTCCGGGACATG 508
Query 419 ATATTCTCATGGCAACAATGCTTAACGGAGCAGCCATCATGGATGGTGCACTAC-TCTTA 477
||||||| ||||| |||||||| || |||||||| ||| |||||||||| ||| || ||
Sbjct 509 ATATTCTTATGGCGACAATGCTCAATGGAGCAGCAATCGTGGATGGTGCTTTACTTC-TA 567
Query 478 ATCGCTGCAAATGAGACG-TGTCCGCAACCACAAA-CGTCTGAACATCTTGCTGCCGTCG 535
|| ||||| || |||| | ||||| |||||||||| || |||||||||||||| | || |
Sbjct 568 ATTGCTGCTAACGAGA-GTTGTCCACAACCACAAACCG-CTGAACATCTTGCTTCTGTTG 625
Query 536 AGATTATGC-AATTGAAGCATATCATCATCCTTCAGAACAAGATTGATCTTATTCAA-GA 593
| || |||| || ||||||||||| ||||||||||||||||||||||| ||| || ||
Sbjct 626 ATATGATGCGCCTT-AAGCATATCATAATCCTTCAGAACAAGATTGATCTCATT-AATGA 683
Query 594 GAACGTTGCCA-TTAATCAGCACGAGGCAATTCAGAAATTTATAATGAACACTG-TTGCG 651
||| | |||| | || ||||||||||| |||||||||||||||| |||||| | |||
Sbjct 684 GAAAGCCGCCACTGAA-CAGCACGAGGCTATTCAGAAATTTATAACGAACAC-GAATGCT 741
Query 652 GATGCTGCTCCAATCGTCCCCGTCTCAGCACAACTGAAATACAACATCGATGTTGTGTGC 711
|| | ||| || || || || |||||||||||||||||||||||||| ||||||||| |
Sbjct 742 GAGGATGCACCTATAGTTCCTGTCTCAGCACAACTGAAATACAACATTGATGTTGTGAGT 801
Query 712 GAGTACATAGTCAAGAAGATCCCAATCCCTGAGAGGA-ATTTTGTGTCACCCCCAAATAT 770
|| ||||| ||||||||||| |||||||||| || || | ||||||||||| ||||| ||
Sbjct 802 GAATACATTGTCAAGAAGATTCCAATCCCTGTGA-GAGACTTTGTGTCACCACCAAAGAT 860
Query 771 GATAGTGATTCGATCTTTTGATGTCAACAAACCTGGTTATGAGGTTGATGAGATTAAAGG 830
||| |||||||| ||||| |||||||| |||||||| | | || | |||| || |||||
Sbjct 861 GATTGTGATTCGTTCTTTCGATGTCAATAAACCTGGCTCGGCGGGTCATGAAATGAAAGG 920
Query 831 TGGAGTTGCAGGTGGAAGTATCCTCCGGGGTGTTTTGAAAGTCAACCAATTAATTGAAAT 890
||| ||||| |||||||||||||||| ||||||||||||||| |||||| | ||||||||
Sbjct 921 TGGTGTTGCTGGTGGAAGTATCCTCCAGGGTGTTTTGAAAGTGAACCAACTGATTGAAAT 980
Query 891 CCGACCTGGTATC-GTTACAAAAGACGAGCGTGGCAACTCAAAATGCACTCCAATTTACT 949
||||||||||| | | ||||| |||| ||| |||||||||||||||||||||||||
Sbjct 981 TAGACCTGGTATCACTGGC-AAAGATGAGCATGGAAACTCAAAATGCACTCCAATTTACT 1039
Query 950 CTCGCATAATC-TCACTCTACGCGGAACAGAACGAGCTTCAGTTTGCTGTTCCTGGG-GG 1007
| || |||| | ||||| |||||||||||||||||||||||||||||||| || ||| ||
Sbjct 1040 CGCGTATAA-CTTCACTATACGCGGAACAGAACGAGCTTCAGTTTGCTGTACC-GGGAGG 1097
Query 1008 TCTAATAGGAGTTGGGACAACAATGGACCCAACTCTTACTCGTGCAGATCGATTAGTTGG 1067
|||||| |||||||| ||||| |||||||| || ||||| ||||| ||| | || |||||
Sbjct 1098 TCTAATCGGAGTTGGAACAACCATGGACCCTACGCTTACGCGTGCTGATAGGTTGGTTGG 1157
Query 1068 TCAAGTCCTTGGTGAAATCGGTTCACTTCCTGATGTCTTTGTTGAACTCGAGGTTAACTT 1127
|||||||||||||||||| ||| | || ||||| ||||||||||| || || || || ||
Sbjct 1158 TCAAGTCCTTGGTGAAATGGGTACTCTCCCTGACGTCTTTGTTGAGCTTGAAGT-AAGTT 1216
Query 1128 -CTTTCTTCT-ACGACGTTTG-TTGGGAGTGAGAACAAAGGGATCAGAGAAACAAGGGAA 1184
| ||||| || ||| | |||| |||||| ||||||| | |||||| ||| |||
Sbjct 1217 ACCAGCTTCTGACT-CGTCTCATTGG-AGTGAGGACAAAGGAAAAAGAGAAGCAAATGAA 1274
Query 1185 GGTGTCAAAGCTAACGAAGGGAGAGAT-TCTGATGCTCAACATTGGTTCTATGTCCACTG 1243
|||||||||||||| || | |||||| | ||||| | ||||| || |||||||| || |
Sbjct 1275 AGTGTCAAAGCTAACCAAAGAAGAGATAT-TGATGGTGAACATCGGGTCTATGTCTACGG 1333
Query 1244 GAGCCAAAGTTGTGGGAGTTAA-AGTCGATCTGGCT-AAACTGCAACTGACAG-CGCCGG 1300
|||| || ||| | ||||| || | ||| ||| | ||||| |||||||| | | ||||
Sbjct 1334 GAGCTAAGGTTATTGGAGTCAAGAAA-GATATGG-TGAAACTCCAACTGAC-GTCTCCGG 1390
Query 1301 TTTGTACCAGCAAAGGAGAGAAAGTGGCTCTAAGCAGGCGTGTGGAAAAGCATTGGCGTT 1360
| ||||||| || ||||||||| || ||| ||||| | ||||| || | ||||||||||
Sbjct 1391 TGTGTACCACCATAGGAGAGAAGGTTGCTTTAAGCCGACGTGTCGATAGGCATTGGCGTC 1450
Query 1361 TGATTGGTTGGGGTCAGATTCAAG-CTGGAACCACCATTGAAGTTCCTCCTTCACCTTTC 1419
| |||||| |||||||||| | | ||||||||||||| || ||||||||| | ||||||
Sbjct 1451 TAATTGGTAAGGGTCAGATT-ATGGCTGGAACCACCATCGATGTTCCTCCTCCTCCTTTC 1509
Query 1420 TAA 1422
|||
Sbjct 1510 TAA 1512
> AT2G18720.1 | Symbols: | Translation elongation factor EF1A/initiation
factor IF2gamma family protein | chr2:8114920-8116811
REVERSE LENGTH=1465
Length=1465
Score = 1024 bits (554), Expect = 0.0
Identities = 1131/1404 (81%), Gaps = 62/1404 (4%)
Strand=Plus/Plus
Query 23 TAATGTCGAGGAACAAAGGTTTGGCTGAGCAAGATCTTAA--AAAATTGGATGTAACTGT 80
||||||||| |||||| || || ||||| ||||||| ||| ||| || |||||| ||
Sbjct 66 TAATGTCGAAGAACAAGGGCTTAGCTGAACAAGATC-TAAGTAAACTT-GATGTAGCTCA 123
Query 81 GCTACATCCTTTGTCCCCTGAGGTCATTTCTCGCCAGGCCACTATTAATATAGGAACCAT 140
||| |||||| | || ||||||||||| ||||| || ||||| ||||| |||||||||||
Sbjct 124 GCTGCATCCTCTCTCTCCTGAGGTCATCTCTCGTCAAGCCACCATTAACATAGGAACCAT 183
Query 141 TGGCCATGTCGCTCA-TGGAAAGTCCACTGTTGTGAAAGCTATTTCTGGTGTCCAGACTG 199
||||||||||||||| ||||| || || | |||||||| |||| ||||| || ||||
Sbjct 184 TGGCCATGTCGCTCACGGGAAA-TCGACAATCGTGAAAGCCGTTTCCGGTGTGCACACTG 242
Query 200 TCCGTTTTAAGAATGAATTGGAGCGTAACATTACCATTAAGCTTGGATATGCAAATGCTA 259
|| || |||| ||||||||||||||||||||||||||| ||||| || ||||| || |
Sbjct 243 TCAAATTCAAGAGTGAATTGGAGCGTAACATTACCATTAAACTTGGTTACGCAAACGCAA 302
Query 260 AGATTTACAAATGTGAGGATGAGAAATGCCCTAGACCAATGT-G-CTACAAGGCCTACGG 317
|||||||||||||| || | |||||||||||||| | || | ||||||| | | |||
Sbjct 303 AGATTTACAAATGT---GA--A-AAATGCCCTAGACC-A-GTAGCCTACAAGTCTTTCGG 354
Query 318 AAGTGGAAAAGAAGAC-ACTCCAAATTGTGATGTCCCCGGATTTGAAAACTCCAAGATGA 376
||||| ||||||||| || |||| |||||||||| | ||| ||| || | ||||||||
Sbjct 355 GAGTGGCAAAGAAGACAAC-CCAAGTTGTGATGTCTCTGGACATGAGAAGTACAAGATGA 413
Query 377 AACTATTGAGGCATGTGTCATTCGTGGATTGCCCGGGACACGATATTCTCATGGCAACAA 436
||||| | || ||||| ||||| || |||||||||||||||||||| || ||||| ||||
Sbjct 414 AACTACTAAGACATGTCTCATTTGTTGATTGCCCGGGACACGATATCCTAATGGCGACAA 473
Query 437 TGCTTAACGGAGCAGCCATCATGGATGGTGCACTACTCTTAATCGCTGCAAATGAGACGT 496
|||| || |||||||| || ||||||||||| |||| | || ||||| |||||||| |
Sbjct 474 TGCTGAATGGAGCAGCGATTATGGATGGTGCTTTACTAATCATTGCTGCGAATGAGACAT 533
Query 497 GTCCGCAACCACAAAC-GTCTGAACATCTTGCTGCCGTCGAGATTATGCA-ATTGAAGCA 554
|||| ||||||||||| | |||||||||||||| | || || || ||||| || ||| |
Sbjct 534 GTCCACAACCACAAACAG-CTGAACATCTTGCTTCTGTTGATATGATGCATCTTAAAG-A 591
Query 555 TATCATCATCCTTCAGAACAAGATTGATCTTATTCAAGAGAACGTTGCCATTAATCAGCA 614
|||||| ||| ||||||||||||||||||| || ||||| |||| || ||||| |||||
Sbjct 592 TATCATAATCATTCAGAACAAGATTGATCTCATCCAAGAAAACGAGGCTATTAAACAGCA 651
Query 615 CGAGGCA-ATTCAGAAATTTATAATGAACACTG-TTGCGGATGCTGCTCCAATCGTCCCC 672
||||| | || |||| |||||||| |||||| | |||||| | |||||| || || ||
Sbjct 652 CGAGG-ACATCCAGAGATTTATAACGAACAC-GAATGCGGAAGGTGCTCCTATAGTTCCT 709
Query 673 GTCTCAGCACAACTGAAATACAACATCGATGTTGTGTGCGAGTACATAGTCAAGAAGATC 732
|||||||| |||||||||||||||||||||||| |||| |||||||| |||||||||||
Sbjct 710 GTCTCAGCGCAACTGAAATACAACATCGATGTTTTGTGTGAGTACATTGTCAAGAAGATT 769
Query 733 CCAATCCCTGAGAGGAATTTTGTGTCACCCCCAA-ATATGATAGTGATTCGATCTTTTGA 791
||| |||||| |||| ||||||||||||| |||| | ||||| |||||||| ||||||||
Sbjct 770 CCACTCCCTGTGAGGGATTTTGTGTCACCTCCAAGA-ATGATTGTGATTCGTTCTTTTGA 828
Query 792 TGTCAACAAACCTGGTTATGAGGT-TGATGAG-ATTAAAGGTGGAGTTGCAGGTGGAAGT 849
|||||| |||||||| | ||| | ||||| | || |||||||||||||||||||| |||
Sbjct 829 TGTCAATAAACCTGGCTCTGA-TTATGATG-GTATGAAAGGTGGAGTTGCAGGTGGGAGT 886
Query 850 ATCCTCCGGGGTGTTTTGAAAGTCAACCAAT-TAATTGAAATCCGACCTGGTATCGTTAC 908
||||| | |||||||||||| || | || |||| || || ||||||| ||| ||
Sbjct 887 ATCCTTCAGGGTGTTTTGAAGGTGGGGC-ATATAATAGAGATAAGACCTGGAATCACTAG 945
Query 909 AAAAGACGAGCGTGGCA-ACTCAAAATGCACTCCAATTTACTCTCGCATAATC-TCACTC 966
|||||| ||| ||| | || | ||||||||||| |||||| | || |||| | ||| |
Sbjct 946 AAAAGATGAGAATGG-AGACACTAAATGCACTCCCATTTACACGCGTATAA-CTTCATTG 1003
Query 967 TACGCGGAACAGAACGAGCTTCAGTTTGCTGTTCCTGGG-GGTCTAATAGGAGTTGGGAC 1025
|||||||||||||||||||||||||||||||| || ||| ||| | || ||| |||||||
Sbjct 1004 TACGCGGAACAGAACGAGCTTCAGTTTGCTGTCCC-GGGAGGTTTGATTGGAATTGGGAC 1062
Query 1026 AA-CAATGGACCCAACTCTTACTCGTGCAGATCGATTAGTTGGTCAAGTCCTTGGTGAAA 1084
|| || |||| || || ||||| |||| ||| | |||||||||||||||||||||||||
Sbjct 1063 AAGCA-TGGATCCTACGCTTACGCGTGGTGATAGGTTAGTTGGTCAAGTCCTTGGTGAAA 1121
Query 1085 TCGGTTCACTTCCTGATGTCTTTGTTGAACTCGAGGTTAACTTCTTTCTTCT-ACGACGT 1143
| ||| | || |||||||||| ||||||||| || || | ||| ||||| || ||||
Sbjct 1122 TAGGTACTCTCCCTGATGTCTATGTTGAACTTGAAGTGAGTTTCCAGCTTCTGAC-ACGT 1180
Query 1144 TTG-TTGGGAGTGA-GAACAAAGGGATCAGAGAAACAAGGGA-AGGTGTCAAAGCTAA-C 1199
| |||| ||||| || |||||| | |||||| ||| || || ||||||||||| |
Sbjct 1181 CTCATTGG-AGTGAAGA-CAAAGGAAACAGAGAGGCAAATGAGAG-TGTCAAAGCTAGTC 1237
Query 1200 GAAGGGAGAGATTCTGATGCTCAACATTGGTTCTATGTCCACTGGAGCCAAAGTTGTGGG 1259
||||||||||| |||||| | || || || || ||||| || ||||| | ||| | ||
Sbjct 1238 -AAGGGAGAGATACTGATGTTGAATATCGGATCGATGTCTACGGGAGCTATGGTTATTGG 1296
Query 1260 AGTTAAAGTC-GATCTGGCT-AAACTGCAA-CTGACAGCGCCG-GTTTGTACCAGCAAAG 1315
||| |||| ||| ||| | ||| | || |||||| | || || || ||||||| |
Sbjct 1297 AGT-AAAGAAAGATATGG-TGAAAGTT-AATCTGACA-CTCCCTGTGTGCACCAGCATTG 1352
Query 1316 GAGAGAAAGTGGCTCTAAG-CAGGCGTGTGGAAAAGCATTGGCGTTTGATTGGTTGGGGT 1374
|||||||||||||| |||| | | |||||||| | ||||||||||||||| ||| | |||
Sbjct 1353 GAGAGAAAGTGGCTATAAGTC-GCCGTGTGGATAGGCATTGGCGTTTGATCGGTCGCGGT 1411
Query 1375 CAGATTCAAGCTGGAACCACCATT 1398
|||||| | |||||||||||||||
Sbjct 1412 CAGATTGAGGCTGGAACCACCATT 1435
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 71083971720
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5