BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg919122
Length=1447
Score E
Sequences producing significant alignments: (Bits) Value
AT1G04440.1 | Symbols: CKL13 | casein kinase like 13 | chr1:120... 2351 0.0
AT5G43320.1 | Symbols: ckl8 | casein kinase I-like 8 | chr5:173... 1291 0.0
AT4G14340.1 | Symbols: CKI1, CKL11 | casein kinase I | chr4:824... 640 0.0
> AT1G04440.1 | Symbols: CKL13 | casein kinase like 13 | chr1:1202255-1205803
FORWARD LENGTH=2106
Length=2106
Score = 2351 bits (1273), Expect = 0.0
Identities = 1382/1435 (96%), Gaps = 5/1435 (0%)
Strand=Plus/Plus
Query 16 GAAAAATGGATCGTGTGGTTGGTGGTAAGTTCAAGCTCGGACGTAAGCTTGGAAGTGGTT 75
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 556 GAAAAATGGATCGTGTGGTTGGTGGTAAGTTCAAGCTCGGACGAAAGCTTGGAAGTGGCT 615
Query 76 CCTTTGGTGAAATTTTCCTAGGAGTCAATGTACAAACTGGAGAAGAAGTGGCTGTTAAAC 135
| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 616 CATTTGGTGAAATTTTCCTAGGAGTGAATGTACAAACTGGAGAAGAAGTGGCTGTTAAGC 675
Query 136 TTGAACCTCTCCGGGCTAGGCATCCTCAGCTTCATTACGAGTCAAAGCTTTATATGCTTC 195
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 676 TTGAACCTCTCCGAGCTAGGCATCCTCAGCTTCATTACGAGTCAAAGCTTTATATGCTTC 735
Query 196 TCCAAGGAGGAACTGGTATTCCTCACCTCAAATGGTTTGGTGTTGAGGGTGAATTCAACT 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 736 TCCAAGGAGGAACTGGTATTCCTCACCTCAAATGGTTTGGTGTTGAGGGTGAATTCAACT 795
Query 256 GTATGGTTATCGACCTTCTCGGTCCTAGTATGGAGGAATTTTTCAACTATTGCAGTCGAT 315
||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 796 GTATGGTGATCGACCTTCTCGGTCCTAGTATGGAAGAATTTTTCAACTATTGCAGTCGAT 855
Query 316 CCTTCACTCTTAAGACTGTTCTAATGCTCGCTGATCAGATGATAAATAGAGTCGAGTATA 375
||||| |||||||||| |||||||||||||| ||||| |||||||||||||| |||||||
Sbjct 856 CCTTCTCTCTTAAGACAGTTCTAATGCTCGCAGATCAAATGATAAATAGAGTGGAGTATA 915
Query 376 TGCATGT-ACGAGGGTTTCTTCATCGTGATATCAAGCCAGATAACTTTTTGATGGGTCTT 434
||||||| | ||| || |||||||||||||| |||||||||||||||||||||||||||
Sbjct 916 TGCATGTTAA-AGGCTTCCTTCATCGTGATATTAAGCCAGATAACTTTTTGATGGGTCTT 974
Query 435 GGACGCAAAGCAAACCAGGTGTACATCATTGACTACGGGCTTGCCAAGAAGTATAGAGAT 494
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 975 GGACGCAAAGCAAACCAGGTGTACATCATTGACTATGGGCTTGCCAAGAAGTATAGAGAT 1034
Query 495 CTTCAAACACACAAGCATATTCCATACAGGGAAAACAAGAATCTTACAGGAACAGCTCGA 554
||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 1035 CTTCAAACACACAAGCATATTCCATACAGGGAAAACAAGAACCTTACTGGAACAGCTCGA 1094
Query 555 TATGCAAGTGTTAACACCCATCTTGGAATTGAGCAAAGTAGAAGGGATGATCTGGAATCT 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1095 TATGCAAGTGTTAACACCCATCTTGGAATTGAGCAAAGTAGAAGGGATGATCTGGAATCT 1154
Query 615 CTTGGCTATGTGCTTATGTATTTTCTTCGAGGAAGCCTTCCTTGGCAAGGCCTTCGTGCA 674
|| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1155 CTAGGCTATCTGCTTATGTATTTTCTTCGAGGAAGCCTTCCTTGGCAAGGCCTTCGTGCA 1214
Query 675 GGTACCAAAAAGCAGAAGTATGACAAGATCAGTGAAAAGAAAAGACTAACACCAGTGGAG 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1215 GGTACCAAAAAGCAGAAGTATGACAAGATCAGTGAAAAGAAAAGACTAACACCAGTGGAG 1274
Query 735 GTCCTCTGTAAAAACTTTCCACCTGAGTTCACATCGTATTTTCTCTATGTGCGTTCATTA 794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1275 GTCCTCTGTAAAAACTTTCCACCTGAGTTCACATCGTATTTTCTCTATGTGCGTTCACTA 1334
Query 795 CGGTTTGAAGACAAACCAGATTATTCATACCTAAAGAGGCTTTTCAGAGAACTATTTATC 854
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1335 CGGTTTGAAGACAAACCAGATTATTCATACCTAAAGAGGCTTTTCAGAGACCTATTTATC 1394
Query 855 CGAGAAGGTTATCAGTTTGACTATGTATTTGATTGGACAATATTGAGGTATCCACAGTTC 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1395 CGAGAAGGTTATCAGTTTGACTATGTATTTGATTGGACAATATTGAGGTATCCACAGTTC 1454
Query 915 GGCTCCAGTTCCAGCTCCAATTCCAAACCAAGACCAAGTTTAAGACCAGCTATGAATATT 974
||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1455 GGCTCCAGTTCCAGCTCGAATTCCAAACCAAGACCAACTTTAAGACCAGCTATGAATATT 1514
Query 975 CCAGTACCATCTGCCGACAAAGCAGAAAAGCCTTCAATTGGGCAGGACAGCCGCGAGAGG 1034
||||||||||||||||||||||| ||||||||| ||||||| ||||||||||| ||||||
Sbjct 1515 CCAGTACCATCTGCCGACAAAGCGGAAAAGCCTCCAATTGGACAGGACAGCCGTGAGAGG 1574
Query 1035 TTCTCAGGTGTTTTCGAGGCATACAGCAGAAGAAATGGCTCAGGAACCGGCGTTCAAGCT 1094
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1575 TTCTCAGGTGTTTTCGAGGCATACACCAGAAGAAATGGCTCAGGAACCGGCGTTCAAGCT 1634
Query 1095 GATCAATCTGGTAGACCAAGAACCTCAGAGAATGTTCTTGCATCCAAGGACACGCAAAAC 1154
||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1635 GATCAGTCTAGTAGACCAAGAACCTCAGAGAATGTTCTTGCATCCAAGGACACGCAAAAC 1694
Query 1155 CAGGAGAGACCAATA-TCTTTATCTAGGAACCTGAGTTCGTCAAGAAAAGCAATTGCTGG 1213
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1695 CAGGAGAGACCAA-ACTCTTTATCTAGGAACCTGAGTTCGTCAAGAAAAGCAATTGCTGG 1753
Query 1214 GTCAAGTGTTCGAGCCACTTCCTCAGCTGATTTCACAGAGAATCGATCAAGCAGACTCAT 1273
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1754 GTCAAGTGTTCGAGCCACTTCCTCAGCTGATTTCACAGAGAATCGATTAAGCAGACTCAT 1813
Query 1274 CCCAAACAACGGTCGGTCCTCTACAACTCAGAGGACCCAGTTTGCTCCTTCGTCCTCCTC 1333
||||||||| | |||||| |||||||||| |||||||||||| |||||||||||||||||
Sbjct 1814 CCCAAACAATGATCGGTCTTCTACAACTCTGAGGACCCAGTTCGCTCCTTCGTCCTCCTC 1873
Query 1334 TTTAGCCACAAAGGCTGCACCAACGAGAACCGCACGGGACATTACCCTCCAGAGCCTCGA 1393
|||||||||| ||||||||||||||| |||| || |||||||||||||||||||| ||
Sbjct 1874 AGTAGCCACAAAAGCTGCACCAACGAGAGCCGCTCGTGACATTACCCTCCAGAGCCTTGA 1933
Query 1394 GCTCCTCAGTATTGGGAACAGCAAGAGGAAGTGACTATCTGCATTT-GTCGCCCG 1447
|||||||||||||||||||||||||||||||||||| ||||||||| | ||||||
Sbjct 1934 GCTCCTCAGTATTGGGAACAGCAAGAGGAAGTGACTGTCTGCATTTTGCCGCCCG 1988
> AT5G43320.1 | Symbols: ckl8 | casein kinase I-like 8 | chr5:17385867-17389527
REVERSE LENGTH=2205
Length=2205
Score = 1291 bits (699), Expect = 0.0
Identities = 1140/1345 (85%), Gaps = 62/1345 (5%)
Strand=Plus/Plus
Query 10 TTTGGTGAAAAATGGATCGTGTGGTTGGTGGTAAGT-TCAAGCTCGGACGTAAGCTTGGA 68
|||||| || ||||||||||||||||||||||||| | ||||| |||||||| ||||||
Sbjct 577 TTTGGT-AACGATGGATCGTGTGGTTGGTGGTAAGTAT-AAGCTTGGACGTAAACTTGGA 634
Query 69 AGTGGTTCCTTTGGTGAAATTTTCCTAGGAGTCAATGTACAAACTGGAGAAGAAGTGGCT 128
||||| || ||||||||| |||| ||||| || ||||||||||||||||||||||| |||
Sbjct 635 AGTGGATCATTTGGTGAACTTTTTCTAGGGGTTAATGTACAAACTGGAGAAGAAGTTGCT 694
Query 129 GTTAAACTTGAACCTCTCCG-G-GCTAGGCATCCTCAGCTTCATTACGAGTCAAAGCTTT 186
|| || |||||| | || || | ||||| |||||||| |||||||| || ||||||||||
Sbjct 695 GTGAAGCTTGAA-C-CTGCGAGAGCTAGACATCCTCAACTTCATTATGAATCAAAGCTTT 752
Query 187 ATATGCTTCTCCAAGGAGGAACTGGTATTCCTCACCTCAAATGGTTTGGTGTTGAGGGTG 246
|||||||||| |||||||||||||||||||| || || ||||||| ||| ||||||||||
Sbjct 753 ATATGCTTCTTCAAGGAGGAACTGGTATTCCACATCTAAAATGGTATGGGGTTGAGGGTG 812
Query 247 AATTCAACTGTATGGTTATCGACCTTCTCGGTCCTAGTATGGAGGAATTT-TTCAACTAT 305
||| |||||||||||| || |||||| | ||||| |||||||||| |||| || || |||
Sbjct 813 AATACAACTGTATGGTGATTGACCTTTTGGGTCCGAGTATGGAGG-ATTTATTTAATTAT 871
Query 306 TGCAGTC-GATCCTTCACTCTTAAGACTGTTCTAATGCTCGCTGATCAGATGATAAATAG 364
|| |||| || |||| ||| ||||| |||||||||||||| ||||| ||||| |||||
Sbjct 872 TGTAGTCGGA-GGTTCAATCTAAAGACGGTTCTAATGCTCGCAGATCAAATGATCAATAG 930
Query 365 AGTCGAGTATATGCATGTACGAGGG-TTTCTTCATCGTGATATCAAGCCAGATAACTTTT 423
||| |||||||||||||| || ||| |||||||||||||| || ||||| ||||||||||
Sbjct 931 AGTTGAGTATATGCATGTCCG-GGGATTTCTTCATCGTGACATAAAGCCTGATAACTTTT 989
Query 424 TGATGGGTCTTGGACGCAAAGCAAACCAGGTGTACATCATTGACTACGGGCTTGCCAAGA 483
|||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || |
Sbjct 990 TGATGGGTCTTGGACGCAAAGCGAACCAGGTGTACATCATTGACTACGGACTTGCAAAAA 1049
Query 484 AGTATAGAGATCTTCAAACACACAAG-CATATTCCATACAGGGAAAACAAGAATCTTACA 542
||||||||||||| ||||| || || || ||||| |||||||||||||||||||||||
Sbjct 1050 AGTATAGAGATCTCCAAACTCA-TAGACACATTCCCTACAGGGAAAACAAGAATCTTACT 1108
Query 543 GGAACAGCTCGATATGCAAGTGTTAACACCCATCTTGGAATTGAGCAAAGTAGAAGGGAT 602
||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 1109 GGAACAGCTCGATATGCAAGTGTTAACACTCATCTTGGAATTGAGCAAAGTAGGAGGGAC 1168
Query 603 GATCTGGAATCTCTTGGCTATGTGCTTATGTATTTTCTTCGAGGAAGCCTTCCTTGGCAA 662
|||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct 1169 GATCTGGAATCTCTTGGCTACGTGCTTATGTATTTTCTTCGAGGAAGTCTTCCTTGGCAA 1228
Query 663 GGCCTTCGTGCAGGTACCAAAAAGCAGAAGTATGACAAGATCAGTGAAAAGAAAAGACTA 722
||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||| ||
Sbjct 1229 GGCCTTCGTGCGGGTACCAAAAAACAGAAGTATGACAAGATCAGCGAAAAGAAAAGGCTT 1288
Query 723 ACACCAGTGGAGGTCCTCTGTAAAAACTTTCCACCTGAGTTCACATCGTATTTTCTCTAT 782
||||| || ||||| ||||||||| ||||||||||||||||||||| || || ||||||
Sbjct 1289 ACACCTGTAGAGGTTCTCTGTAAATCCTTTCCACCTGAGTTCACATCATACTTCCTCTAT 1348
Query 783 GTGCGTTCATTACGGTTTGAAGACAAACCAGATTATTCATACCTAAAGAGGCTTTTCAGA 842
|| || ||||| |||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1349 GTACGATCATTGCGGTTTGAAGACAAACCAGATTATCCATACCTAAAGAGGCTTTTCAGG 1408
Query 843 GAACTATTTATCCGAGAAGGTTATCAGTTTGACTATGTATTTGATTGGACAATATTGAGG 902
|| || ||||| ||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct 1409 GATCTCTTTATTCGAGAAGGTTATCAGTTTGACTATGTATTTGATTGGACAATCTTGAAG 1468
Query 903 TATCCACAGTTCGGCTCCAGTTCCAGCTCCAATTCCAAACCAAGACCAAGTTTAAGACCA 962
||||||||||| | || | |||||||| | ||||| |||||| |||| | ||||||
Sbjct 1469 TATCCACAGTTTAGTTCGGGCTCCAGCTCTAGCTCCAAGCCAAGATCAAGCCTGAGACCA 1528
Query 963 GCTATGAATATTCCAGTACCA-TCTGCCGACAA-AGCAGA-AAAGCCTTCAATTGG-GCA 1018
||||||||| |||||||||| | |||||| || | |||| ||| |||||| ||| ||
Sbjct 1529 GCTATGAATCCTCCAGTACCAAT-TGCCGA-AAGACCAGATAAA-CCTTCAGCTGGAGCT 1585
Query 1019 GGACA-GCC-G-CGAGAG-G-TTCTCAGGTGTTTTCGAGGCATACAGC-AGAAGAAATGG 1072
|| || | | | ||||| | |||||||||| ||| |||||||| || |||||||||||
Sbjct 1586 GGGCAAGACAGTCGAGATAGATTCTCAGGTGCTTTAGAGGCATAT-GCTAGAAGAAATGG 1644
Query 1073 CTCAGGAACCGGCGT--T-CAAGCTGATCAATCTGGTAGACCAAGAACCTCAGAGAATGT 1129
|||||||| ||| || | |||||||||| |||| |||||||||||||||||||||||
Sbjct 1645 CTCAGGAAGCGGTGTGGTACAAGCTGATCGATCT---AGACCAAGAACCTCAGAGAATGT 1701
Query 1130 TCTT-GCATC--CAA-GGA--CA-CGC-A-AAACC-A-G-GAGAG---A----CCAATAT 1170
|| ||||| ||| ||| || | | | ||| | | | ||||| | ||||| |
Sbjct 1702 A-TTAGCATCGTCAAAGGATACAACACCACAAAACTATGAGAGAGTCGAAAGACCAATCT 1760
Query 1171 CTTTATCTAGGA-AC-CTGAGTTCGTCAAGAAAAGCAATTGCTGGGTCAAGTGTTCGAGC 1228
||| | | || | || | ||||| ||||||||||| ||| | || || || |||||
Sbjct 1761 CTTCAACAAG-ACACGCA-AGTTCTTCAAGAAAAGCTGTTG-TA--TCGAGCGTACGAGC 1815
Query 1229 CACTTCCTCAGCTGATTTCACAGAGAATCGATCAAGCAGACTCATCCCAAACAACGGTCG 1288
|||||| |||||||||||||||||||| || || |||||| | |||||| ||| || ||
Sbjct 1816 CACTTCTTCAGCTGATTTCACAGAGAACCGCTCTAGCAGAGTTGTCCCAAGCAATGGCCG 1875
Query 1289 GTCCTCTACAACTCAGAGGACCCAG 1313
||||| || |||||||||| |||
Sbjct 1876 TTCCTCAACCGCTCAGAGGACTCAG 1900
> AT4G14340.1 | Symbols: CKI1, CKL11 | casein kinase I | chr4:8248286-8251998
REVERSE LENGTH=1950
Length=1950
Score = 640 bits (346), Expect = 0.0
Identities = 765/961 (80%), Gaps = 53/961 (6%)
Strand=Plus/Plus
Query 17 AAAA-ATGGATCGTGTGGTTGGTGGTAAGTTCAAGCTCGG-ACGTAAGCTTGGAAGTGGT 74
|||| ||||||| || | || || ||||| ||| | || | | ||||||||||||||
Sbjct 344 AAAAGATGGATCACGTTATCGGCGGGAAGTTTAAGTTGGGTA-GGAAGCTTGGAAGTGGA 402
Query 75 TCCTTTGGTGAAATTT-TCCTA-GGAGTCAATGTACAAACTGGAGAAGAAGTGGCTGTTA 132
|| || |||||| ||| | || ||| ||||| | ||||||||||||||||| || ||||
Sbjct 403 TCATTCGGTGAACTTTAT-TTAGGGA-TCAATATTCAAACTGGAGAAGAAGTCGCAGTTA 460
Query 133 AACTTGAACCTCTCCGGGCTAGGCATCCTCAGCTTCATTACGAGTC-AAAGCTTTATATG 191
| || |||||| | | | ||||||||||| || || || || || ||| | ||||||
Sbjct 461 AGCTGGAACCTGTGAAGACGAGGCATCCTCAACTGCAGTATGAATCGAAA-ATATATATG 519
Query 192 CTTCTCCAAGGAGGAACTGGTATTCCTCACCTCAAATGGTTTGGTGTTGAGGGTGAATTC 251
|||| ||||||||||| ||| |||| || || ||||||||||| ||||||||||||| |
Sbjct 520 TTTCTTCAAGGAGGAACGGGTGTTCCCCATCTGAAATGGTTTGGAGTTGAGGGTGAATAC 579
Query 252 AACTGTATGGTTATCGACCTTCTCGGTCCTAG-TATGGAGGAATTTTTCAACTATTGC-A 309
| || ||||||||||| ||||| || || || | ||||||| || ||||| || ||| |
Sbjct 580 AGTTGCATGGTTATCGATCTTCTTGGGCCAAGCT-TGGAGGACTTATTCAATTACTGCAA 638
Query 310 GTCG-ATCCTTCACTC-TTAAGA-CTGTTCTAATGCTCGCTGATCAGA-TGATAAATAGA 365
| || || || || |||| | ||||| ||||||| || ||||| | ||||| ||||
Sbjct 639 G-CGAAT-ATT--TTCATTAAAATCTGTTTTAATGCTTGCAGATCA-ATTGATATGTAGA 693
Query 366 GTCGAGTATATGCATGTACG-AGGG-TTTCTTCATCGTGATATCAAGCCAGATAACTTTT 423
|| |||||||||||| | || ||| |||||||| || ||||| || ||||| |||||||
Sbjct 694 GTTGAGTATATGCAT-T-CGCGGGGTTTTCTTCACCGCGATATTAAACCAGACAACTTTT 751
Query 424 TGATGGGTCTTGGACGCAAAGCAAACCAGGTGTACATCATTGACTACGGGCTTGCCAAGA 483
||||||||||||| |||| ||||||||||||||| |||||||| || || ||||| || |
Sbjct 752 TGATGGGTCTTGGGCGCAGAGCAAACCAGGTGTATATCATTGATTATGGCCTTGCTAAAA 811
Query 484 AGTA-TAGAGATCTTCAAACACACAAGCATATTCCATACAGGGAAAACAAGAATCTTACA 542
| || || |||||||| ||||| |||||||| |||||||||||||||||||||||||||
Sbjct 812 AATACAAG-GATCTTCAGACACAAAAGCATATACCATACAGGGAAAACAAGAATCTTACA 870
Query 543 GGAACAGCTCGATATGCAAGTGTTAACACCCATCTTGGAATTGAGCAAAGTAGAAGGGAT 602
||||| ||||| ||||||||||| ||||| || ||||| ||||||||||||||||| |||
Sbjct 871 GGAACTGCTCGGTATGCAAGTGTGAACACACACCTTGGGATTGAGCAAAGTAGAAGAGAT 930
Query 603 GATCTGGAATCTCTTGGCTATGTGCTT-ATGTATTTTCTTCGAGGAAGCCTTCCTTGGCA 661
|||||||| || ||||| |||||| || ||||||||||| |||||||| ||||| |||||
Sbjct 931 GATCTGGAGTCACTTGGTTATGTG-TTGATGTATTTTCTACGAGGAAGTCTTCCGTGGCA 989
Query 662 AGGCCTTCGT-GCAGGTACCAAAAAGCAGAAGTATGACAAGATCAGTGAAAAGAAAA-GA 719
||| || || ||||| || |||||||| ||||||||||| ||||||||||| | |
Sbjct 990 AGGT-TTAAAAGCTGGTACGAAGAAGCAGAAATATGACAAGATTAGTGAAAAGAAGATG- 1047
Query 720 CTAACACCAGTGGAGG-TCCTCTGTAAAAACTT-TCCACCTGAGTTCACATCGTATTTTC 777
|| || | || ||| || | || || | | |||| | |||||||||||||| || |
Sbjct 1048 CTTACTTCTGTAGAGACTCTT-TGCAAGT-CGTATCCATCAGAGTTCACATCGTACTTCC 1105
Query 778 -TCTA-TGTGCGTTCATT-ACGGTTTGAAGACAAACCAGATTATTCATACCT-A-AAGAG 832
| || ||| |||||||| | | ||||| |||||||| ||||||||||| || | ||||
Sbjct 1106 AT-TACTGT-CGTTCATTGA-GATTTGAGGACAAACCGGATTATTCATATCTGAGAAGA- 1161
Query 833 GCTTTTCAGAGAACTATTT-ATCCGAGAAGGTTATCAGTTTGACTATGTATTTGATTGGA 891
||||| || || || ||| || || |||||||||||| |||| ||||| ||||||||||
Sbjct 1162 -CTTTTTAGGGATCT-TTTCATTCGTGAAGGTTATCAGCTTGATTATGTGTTTGATTGGA 1219
Query 892 CAATATTGAGGTATCCACAG-TTCGGCTCCAGTTCCAGCTCCAATTCCAAA-CCAAGACC 949
|||| | || |||||| ||| || ||||| ||||| || |||| |||| ||||||||
Sbjct 1220 CAATCTCGAAGTATCCTCAGATT-GGCTCTAGTTCGAGA-CCAAGGCCAACTCCAAGACC 1277
Query 950 A 950
|
Sbjct 1278 A 1278
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 71334974445
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5