BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg919131
Length=1617
Score E
Sequences producing significant alignments: (Bits) Value
AT1G04510.1 | Symbols: MAC3A | MOS4-associated complex 3A | ch... 2654 0.0
AT2G33340.1 | Symbols: MAC3B | MOS4-associated complex 3B | ch... 1574 0.0
> AT1G04510.1 | Symbols: MAC3A | MOS4-associated complex 3A |
chr1:1226575-1230827 FORWARD LENGTH=1981
Length=1981
Score = 2654 bits (1437), Expect = 0.0
Identities = 1557/1615 (96%), Gaps = 7/1615 (0%)
Strand=Plus/Plus
Query 1 CTTCTTCTTCTTCGTTTATACTTCGAAGATGAATTGTGCAATTTCCGGCGAAGTTCCGGA 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 147 CTTCTTCTTCTTCGTTTATACTTAGAAGATGAATTGTGCAATTTCCGGCGAAGTTCCGGA 206
Query 61 GGAGCCTGTGGTTTCTAAGAAGTCGGGTTTGCTCTACGAGAAGCGGCTAATCGAGAGGCA 120
||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||
Sbjct 207 GGAGCCTGTGGTTTCTAAGAAGTCGGGTTTGCTTTACGAGAAGCGGCTAATCCAGACGCA 266
Query 121 TATATCGGATTATGGGAAATGCCCGGTTACTGGTGAACCACATACTCTTGATGACATTGT 180
|||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 267 TATATCCGATTATGGGAAATGCCCGGTTACTGGTGAGCCACATACTCTTGATGACATTGT 326
Query 181 TCCCATCAAAACTGGGAAGATCGTAAAGCCGAAACCATTACACACAGCTAGCATCCCTGG 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 327 TCCCATCAAAACTGGGAAGATCGTAAAGCCGAAACCATTACACACAGCTAGCATCCCTGG 386
Query 241 ATTGCTCGGAACGTTCCAGACTGAATGGGACAGTTTGATGCTATCAAATTTTGCACTGGA 300
|||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct 387 ATTGCTTGGAACGTTTCAGACTGAATGGGACAGTTTGATGCTATCAAATTTTGCTTTGGA 446
Query 301 ACAACAACTGCATACTGCTAGGCAAGAGCTAAGTCATGCTTTGTATCAGCATGATGCTGC 360
|||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct 447 ACAACAACTGCATACTGCGAGGCAAGAGCTAAGTCACGCTTTGTATCAGCATGATGCTGC 506
Query 361 TTGTCGTGTGATTGCTAGGCTTAAAAAAGAAAGAGACGAATCACGACAATTGCTTGCAGA 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 507 TTGTCGTGTGATTGCTAGGCTTAAAAAAGAAAGAGACGAATCACGACAATTGCTTGCAGA 566
Query 421 GGCTGAAAGGCAGTTACCTGCAGCCCCCGAAGTTGCCACATCGAATGCTGCTCTTAGTAA 480
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 567 GGCTGAAAGGCAGTTGCCTGCAGCCCCCGAAGTTGCCACATCGAATGCTGCTCTTAGTAA 626
Query 481 TGGTAAACGAGGTATCGATGATGGTGAGCAGGGGCCCGATGCAAAGAAAATGCGTCTTGG 540
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 627 TGGTAAACGAGGTATCGATGATGGTGAGCAGGGGCCTAATGCAAAGAAAATGCGTCTTGG 686
Query 541 AATTTCGGCTGAAGTTATCACAGAACTGACGGATTGTAATGCTGCTCTTTCTCAGCAACG 600
||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||
Sbjct 687 AATTTCGGCTGAAGTTATCACAGAACTCACAGATTGTAATGCTGCTCTTTCTCAGCAGCG 746
Query 601 TAAAAAGAGACAGATCCCTAAAACATTGGCTTCAATTGATGCTCTGGAGAAGTTCACCCA 660
|||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct 747 TAAAAAGAGACAGATCCCTAAAACATTGGCTTCAGTCGATGCTCTGGAGAAGTTCACCCA 806
Query 661 ACTCTCAAGCCACCCACTTCACAAGACCAACAAACCTGGTATTTTTTCAATGGACATCCT 720
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 807 ACTCTCAAGCCACCCCCTTCACAAGACCAACAAACCTGGAATTTTTTCAATGGACATCCT 866
Query 721 ACATTCTAAGGATGTCATCGCTACAGGG-GGAATTGATACAACTGCCGTTCTCTTTGATC 779
|||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct 867 ACATTCTAAGGATGTCATCGCTAC-GGGAGGAATTGATACAACTGCCGTTCTCTTTGATC 925
Query 780 GTCCTTCAGGACAAATCTTATCAACGCTGACTGGTCACTCAAAGAAGGTTACAAGCATTA 839
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 926 GTCCTTCAGGACAAATCTTATCAACGCTGACTGGTCACTCAAAGAAGGTTACAAGCATCA 985
Query 840 AGTTTGTTGGTGACACTGATCTTGTGTTAACTGCTTCATCAGACAAAACAGTCCGCATCT 899
|||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct 986 AGTTCGTTGGTGACACTGATCTTGTGTTAACTGCTTCATCCGACAAGACAGTCCGCATCT 1045
Query 900 GGGGAAGTTCTGAGGATGGGAACTATACCTGTAGACATACATTGAAAGATCACTCTGCAG 959
||||| |||| ||||||||||||||||||| |||||||||| |||||||||| ||||| |
Sbjct 1046 GGGGATGTTCCGAGGATGGGAACTATACCTCTAGACATACACTGAAAGATCATTCTGCCG 1105
Query 960 AGGTGCGAGCTGTAACTGTCCACGCAACGAATAAATACTTTGTGTCAGCATCTCTTGACA 1019
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1106 AGGTGCGAGCTGTAACTGTCCACGCAACGAATAAATACTTTGTGTCAGCATCACTTGACA 1165
Query 1020 GTACATGGTGCTTCTATGATCTGTCCTCCGGTTTATGCCTTGCCCAGGTGACAGATGCTT 1079
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1166 GTACATGGTGCTTCTATGATCTGTCCTCCGGTTTATGCCTTGCTCAGGTGACAGATGCTT 1225
Query 1080 CCGAAAATGT-G-GA-TTACACGGCTGCTGCTTTTCATCCCGACGGTCTCATTCTTGGAA 1136
||||||| | | || |||||||||||||||||||||||| || ||||||||||||||||
Sbjct 1226 CCGAAAACGACGTGAATTACACGGCTGCTGCTTTTCATCCTGATGGTCTCATTCTTGGAA 1285
Query 1137 CTGGTACTGCTCAATCTATTGTTAAGATTTGGGATGTAAAAAGTCAGGCAAATGTGGCAA 1196
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1286 CTGGTACCGCTCAATCTATTGTTAAGATTTGGGATGTAAAAAGTCAGGCAAATGTGGCAA 1345
Query 1197 AGTTTGGCGGACACACTGGAGAAATCACCTCTATATCATTCTCTGAAAACGGTTATTTCC 1256
||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1346 AGTTTGGTGGACACAATGGAGAAATCACCTCTATATCATTCTCTGAAAACGGTTATTTCC 1405
Query 1257 TTGCGACTGCTGCACAGGATGGTGTTAGGTTGTGGGACTTGCGCAAGTTAAAGAACTTCC 1316
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1406 TTGCGACTGCTGCACTGGATGGTGTTAGGTTGTGGGACTTGCGCAAGTTAAAGAACTTCC 1465
Query 1317 GAACATTTGACTTTCCAGATGCAAACTCGGTGGAGTTCGACCATAGTGGATCTTATCTTG 1376
|||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct 1466 GAACCTTTGACTTTCCAGATGCAAACTCGGTGGAGTTTGACCATAGCGGATCTTATCTTG 1525
Query 1377 GCATTGCTGCTTCAGATATAAGAGTATTCCAAACAGCTAGTGTAAAAGCAGAATGGAACC 1436
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1526 GCATTGCTGCTTCAGATATAAGAGTATTCCAAGCAGCTAGTGTAAAAGCAGAATGGAACC 1585
Query 1437 CAATCAAGACTCTTCCCGATCTGTCCGGTACAGGTAAAGCAACATGTGTTAAGTTTGGAC 1496
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1586 CAATCAAGACTCTTCCCGATCTGTCCGGTACAGGTAAAGCAACAAGTGTTAAGTTTGGAC 1645
Query 1497 TCGACTCCAAATACATAGCAGTCGGTTCAATGGACCGTAATCTCAGGATATTTGGTTTAC 1556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1646 TCGACTCCAAATACATAGCAGTCGGTTCAATGGACCGTAATCTCAGGATATTTGGTTTAC 1705
Query 1557 CCGGCGATGACAATACTGAAGATTCTGCACAAGATTCATGAAGAGAT-TCCTCAA 1610
| | |||||||||||||||||||| ||||||||||||||||||||| || ||||
Sbjct 1706 CTGATGATGACAATACTGAAGATTCAGCACAAGATTCATGAAGAGATATC-TCAA 1759
> AT2G33340.1 | Symbols: MAC3B | MOS4-associated complex 3B |
chr2:14126217-14131153 REVERSE LENGTH=2098
Length=2098
Score = 1574 bits (852), Expect = 0.0
Identities = 1330/1559 (85%), Gaps = 40/1559 (3%)
Strand=Plus/Plus
Query 28 GATGAATTGTGCAATTTCCGGCGAAGTTCCGGAGGAGCCTGTGGTTTCTAAGAAGTCGGG 87
|||||| ||||||||||| || |||||||| | |||||| |||||||| | |||||| ||
Sbjct 153 GATGAACTGTGCAATTTCAGGAGAAGTTCCCGTGGAGCCAGTGGTTTCGACGAAGTCAGG 212
Query 88 TTTGCTCTACGAGAAG-CGGCTAATCGAGAGGCATATATCGGATTATGGGAAATGCCCGG 146
|| |||| |||| || || |||||||| || |||||||||||||||||||| |||||||
Sbjct 213 ATTACTCTTCGAG-AGACGACTAATCGAAAGACATATATCGGATTATGGGAAGTGCCCGG 271
Query 147 TTACTGGTGAACCACATACTC-TTGATGACATTGTTCCCATCAAAACTGGGAAGATCGTA 205
||||||| ||||||| ||| | ||||||||||||||||||||||||||||| ||||| ||
Sbjct 272 TTACTGGCGAACCACTTAC-CATTGATGACATTGTTCCCATCAAAACTGGGGAGATCATA 330
Query 206 AAGCCGAAACCATTACACACAGCTAGCATCCCTGGATTGCTCGGAACGTTCCAGACTGAA 265
||||||||| |||| || |||||||| |||||||||||||||||||||||||||| ||||
Sbjct 331 AAGCCGAAAACATTGCATACAGCTAGTATCCCTGGATTGCTCGGAACGTTCCAGAATGAA 390
Query 266 TGGGACAGTTTGATGCTATCAAATTTTGCACTGGAACAACAACTGCATACTGCTAGGCAA 325
|||||| |||||||||||||||||||||||||||| |||||||| |||||||| ||||||
Sbjct 391 TGGGACGGTTTGATGCTATCAAATTTTGCACTGGAGCAACAACTACATACTGCAAGGCAA 450
Query 326 GAGCTAAGTCATGCTTTGTATCAGCATGATGCTGCTTGTCGTGTGATTGCTAGGCTTAAA 385
|||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct 451 GAGCTAAGTCATGCCTTGTATCAGCATGATTCTGCTTGTCGTGTGATTGCTAGACTTAAA 510
Query 386 AAAGAAAGAGACGAATCACGACAATTGCTTGCAGAGGCTGAAAGGCAGT-TACCTGCAGC 444
||||||||||||||| |||| ||||| || || |||| ||| || || | ||||||| ||
Sbjct 511 AAAGAAAGAGACGAAGCACGCCAATTACTGGCCGAGGTTGAGAGACA-TATACCTGCGGC 569
Query 445 CCCCGAAGTTGCCACATCGAATGCTGCTCTTAGTAATGGTAAACGAGGTATCGATGATG- 503
||| |||| || ||| | ||||||||||| |||||||||||||||| | || ||| |
Sbjct 570 CCCTGAAGCTGTGACAGCTAATGCTGCTCTGAGTAATGGTAAACGAGCTGCCGTTGACGA 629
Query 504 GTGAGCAGGGGCCCGATGCAAAGAAAATGCGTCTTGGAATTTCGGCTGAAGTTATCACAG 563
| || | ||| || |||||||||||| || ||| ||||||||| |||||| |||| || |
Sbjct 630 G-GAACTGGGTCCTGATGCAAAGAAATTGTGTCCTGGAATTTCAGCTGAAATTATTACGG 688
Query 564 AACTGACGGATTGTAATGCTGCTCTTTCTCAGCAA-CGTAAAAAGAGACAGATCCCTAAA 622
|| |||| |||||||||||||||||||| ||| || || |||||| ||||||| ||| ||
Sbjct 689 AATTGACTGATTGTAATGCTGCTCTTTCCCAG-AAGCGAAAAAAGCGACAGATTCCTCAA 747
Query 623 ACATTGGCTTCAATTGATGCTCTGGAGAAGTTCACCCAACTCTCAAGCCACCCACTTCAC 682
|||||||| ||||| ||| || |||||| |||||| || || ||||||||||||||||||
Sbjct 748 ACATTGGCGTCAATAGATACTTTGGAGAGGTTCACTCAGCTATCAAGCCACCCACTTCAC 807
Query 683 AAGACCAACAAACCTGGTATTTTTTCAATGGACATCCTACATTCTAAGGATGTCATCGCT 742
|||||||||||||| || |||| ||| |||||||| |||||||||||||||||||| |||
Sbjct 808 AAGACCAACAAACCAGGCATTTGTTCGATGGACATTCTACATTCTAAGGATGTCATTGCT 867
Query 743 ACAGGGGGAATTGATACAACTGCCGTTCTCTTTGATCGTCCTTCAGGACAAATCTTATCA 802
|| || ||| ||||| ||||||| |||||||||||||| ||||| ||||||||||| |||
Sbjct 868 ACTGGAGGAGTTGATGCAACTGCTGTTCTCTTTGATCGCCCTTCTGGACAAATCTTGTCA 927
Query 803 ACGCTGACTGGTCACTCAAAGAAGGTTACAAGCATTAAGTTTGTTGGTGACACTGATCTT 862
|| |||||||||||||| ||||||||||||||| | || ||||| || ||| ||||||||
Sbjct 928 ACACTGACTGGTCACTCGAAGAAGGTTACAAGCGTAAAATTTGTAGGCGACTCTGATCTT 987
Query 863 GTGTTAACTGCTTCAT-CAGACAAAACAGTCCGCATCTGG-GGAAGTTCTGAGGATGGGA 920
|| || |||||||| | | ||||| |||||||| |||||| |||| | ||| ||||||||
Sbjct 988 GTTTTGACTGCTTC-TGCTGACAAGACAGTCCGTATCTGGCGGAA-TCCTGGGGATGGGA 1045
Query 921 ACTATACCTGTAGACATACATTGAAAGATCACTCTGCAGAGGTGCGAGCTGTAACTGTCC 980
| ||| | ||| | |||||||||| ||||| ||||| |||||||||||||||||||| |
Sbjct 1046 ATTATGCTTGTGGGTATACATTGAATGATCATTCTGCGGAGGTGCGAGCTGTAACTGTGC 1105
Query 981 A-CGCAACGAATAAATACTTTGTGTCAGCATCTCTTGACAGTACATGGTGCTTCTATGAT 1039
| | || | |||||||||||||| || ||||||||||| |||||||||||||||| |||
Sbjct 1106 ATCCCA-CAAATAAATACTTTGTCTCGGCATCTCTTGATGGTACATGGTGCTTCTACGAT 1164
Query 1040 CTGTCCTCCGGTTTATGCCTTGCCCAGGTGA-CAGATGCTTCCGAA-AATGTGGATTACA 1097
|||||||| || | ||||||||| ||||| | |||||| ||| || ||||| |||||||
Sbjct 1165 CTGTCCTCTGGCTCATGCCTTGCACAGGT-ATCAGATGATTCA-AAGAATGTAGATTACA 1222
Query 1098 CGGCTGCTGCTTTTCATCCCGACGGTCTCATTCTTGGAACTGGTACTGCTCAATCTATTG 1157
|||||||||||||||||||||| ||||||||||| ||||| |||||| |||||||| |||
Sbjct 1223 CGGCTGCTGCTTTTCATCCCGATGGTCTCATTCTCGGAACCGGTACTTCTCAATCTGTTG 1282
Query 1158 TTAAGATTTGGGATGTAAAAAGTCAGGCAAATGTGGCAAAGTTTGGCGGACACACTGGAG 1217
||||||||||||| || |||||||||||||||||||| ||||||| ||||||||||| |
Sbjct 1283 TTAAGATTTGGGACGTTAAAAGTCAGGCAAATGTGGCTAAGTTTGATGGACACACTGGGG 1342
Query 1218 AAATCACCTCTATATCATTCTCTGAAAACGGTTATTTCCTTGCGACTGCTGCACAGGATG 1277
|| | || ||||||| ||||||||||| ||||| ||||| ||||| |||||| ||||||
Sbjct 1343 AAGTTACAGCTATATCTTTCTCTGAAAATGGTTACTTCCTCGCGACAGCTGCAGAGGATG 1402
Query 1278 GTGTTAGGTTGTGGGA-CTTGCGCAAGTTAAAGAACTTCCGAA-CATTTG-ACTTTCCAG 1334
|||||||||||||||| || ||||||||||| ||||||| || ||||| | | | |||
Sbjct 1403 GTGTTAGGTTGTGGGATCT-GCGCAAGTTAAGGAACTTCA-AATCATTTTTA-TCTGCAG 1459
Query 1335 ATGCAAACTCGGTGGAGTTCGA-CCATAGTGGATCTTATCTTGGCATTGCTGCTTCAGAT 1393
|||| ||||| |||||||| || || ||| ||||||||||| || |||||||| ||||||
Sbjct 1460 ATGCGAACTCTGTGGAGTTTGATCC-TAGCGGATCTTATCTCGGTATTGCTGCATCAGAT 1518
Query 1394 AT-AAGAGTATTCCAAACAGCTAGTGTAAAAGCAGAATGGAACCCAATCAAGACTCTTCC 1452
|| || ||||| ||| || || ||||| ||||| |||||||||| |||||||| || ||
Sbjct 1519 ATCAA-AGTATACCAGACGGCAAGTGTGAAAGCTGAATGGAACCTTATCAAGACACT-CC 1576
Query 1453 C-GATCTGTCCGGTACAGGTAAAGCAACATGTGTTAAGTTTGGACTC-GACTCCAAA-TA 1509
| ||||| ||||| || |||||||| || ||||| |||||||| || || | || | ||
Sbjct 1577 CAGATCTCTCCGGCACTGGTAAAGCTACGTGTGTGAAGTTTGGT-TCAGA-TGCACAGTA 1634
Query 1510 CATAGCAGTCGGTTCAATGGACCGTAATCT-CAGGATATTTGGT-TTACCCGGCGATGA 1566
| | ||||||||||| ||||||||||| || | ||||||||||| || || || |||||
Sbjct 1635 CGTTGCAGTCGGTTCGATGGACCGTAACCTAC-GGATATTTGGTCTT-CCTGGTGATGA 1691
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 79869067095
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5