BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg919193 Length=1974 Score E Sequences producing significant alignments: (Bits) Value AT1G05020.1 | Symbols: | ENTH/ANTH/VHS superfamily protein | c... 2422 0.0 > AT1G05020.1 | Symbols: | ENTH/ANTH/VHS superfamily protein | chr1:1435254-1437667 REVERSE LENGTH=2414 Length=2414 Score = 2422 bits (1311), Expect = 0.0 Identities = 1420/1473 (96%), Gaps = 6/1473 (0%) Strand=Plus/Plus Query 3 AAAAG-GCGACGACGAGGACAATGCCGAGCAAGCTGAAAAAAGCGATTGGTGCGGTTAAA 61 ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 302 AAAAGCGCGACGACGAGGACAATGCCGAGCAAGCTTAAAAAAGCGATTGGTGCGGTTAAA 361 Query 62 GATCAAACGAGCATTAGCTTCGCCAAAGTCGCTAACGGAGCCACCGGAGGCGGCGATCTC 121 ||||| || ||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct 362 GATCAGACAAGCATTAGCCTCGCCAAAGTTGCTAACGGAGCCACCGGAGGCGGCGATCTC 421 Query 122 ACCACTCTCGAGGTTGCGATCTTGAAAGCTACGAGCCACGACGAGGAAGTCCCAATCGAC 181 || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 422 ACGACTCTCGAAGTTGCGATCTTGAAAGCTACGAGCCACGACGAGGAAGTCCCAATCGAC 481 Query 182 GATCGACTCGTAACAGAAATCCTCGGAATCATATCCTCCAAGAAATCTCACGCCGCCTCT 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 482 GATCGACTCGTAACAGAAATCCTCGGAATCATATCCTCCAAGAAATCTCACGCCGCCTCT 541 Query 242 TGCGCCGCCGCGATCGGTCGCCGTATCGGGCGGACTCGGAATTGGATCGTCGCGCTCAAA 301 |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct 542 TGCGCCGCCGCGATCGGTCGCCGTATCGGGCGTACACGGAATTGGATCGTCGCGCTCAAA 601 Query 302 TCCCTAGTCCTCGTCCTCAGGATTTTCCAAGACGGTGATCCTTATTTCCCTCGCGAAGTC 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 602 TCCCTAGTCCTCGTCCTCAGGATTTTCCAAGACGGTGATCCTTATTTCCCTCGCGAAGTC 661 Query 362 CTCCACGCCATGAAACGTGGCGCCAAAATCCTCAATCTCTCCAGCTTCCGCGACGATTCG 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 662 CTCCACGCCATGAAACGTGGCGCCAAAATCCTCAATCTCTCCAGCTTCCGCGACGATTCG 721 Query 422 AACTCTTGCCCTTGGGATTTCACAGCTTTCGTCCGTACATTCGCGCTTTACCTCGACGAA 481 ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 722 AACTCGTGCCCTTGGGATTTCACTGCTTTCGTCCGTACATTCGCGCTTTACCTCGACGAA 781 Query 482 CGTCTCGATTGCTTCCTCACCGGAAAATTACAGAGACGGTACACAATCCGAGACCAAACC 541 |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct 782 CGTCTCGATTGCTTCCTCACCGGAAAATTACAGAGACGGTACACAAACCGAGAACAAACC 841 Query 542 GGAAGAATCAGCACCAACACAACCAACTCAAGATCCCGGTTTAATCCCAAAACCGGAATA 601 |||||||||||||||||| |||| ||| |||||||||||||||||||||| ||||||| Sbjct 842 GGAAGAATCAGCACCAACTCAAC-AAC--AAGATCCCGGTTTAATCCCAAAGCCGGAATT 898 Query 602 AAATCCCACGAACCGGCGGTTCGAGATATGAAACCGGTAATGCTTCTTGACAAAATCACG 661 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 899 AAATCCCACGAACCGGCGGTTCGAGATATGAAACCGGTAATGCTTCTTGACAAAATCACG 958 Query 662 TATTGGCAAAGATTACTAGACAGAGCAATCGCGACGCGGCCAACGGGAGATGCAAAAGCG 721 |||||||||| |||||||||||||||||||||||||||||| |||||||| || ||||| Sbjct 959 TATTGGCAAAAATTACTAGACAGAGCAATCGCGACGCGGCCGACGGGAGACGCGAAAGCC 1018 Query 722 AACAAGCTCGTGAAAATGTCGCTATACGCCGTCATGCAAGAGACTTTTGATCTTTACAGA 781 |||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||| Sbjct 1019 AACAGGCTCGTGAAAATGTCGCTTTACGCCGTCATGCAAGAGAGTTTTGATCTTTACAGA 1078 Query 782 GACATTTCCGATGGATTAGCGCTTTTGTTAGACAGTTTCTTCCATTTGCAATACCAATCT 841 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1079 GACATTTCCGATGGATTAGCGCTTTTGTTAGACAGTTTCTTCCATCTGCAATACCAATCT 1138 Query 842 TGCATTCA-TGCGTTTCAAGCTTGTGTTCGAGCTTCGAAACAGTTCGAAGAGCTTAACGG 900 ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1139 TGCAT-CAATGCGTTTCAAGCTTGTGTTCGAGCTTCGAAACAGTTCGAAGAGCTTAACGC 1197 Query 901 ATTCTACGATATTTGCAAATCGATCGGTATAGGAAGAACATCGGAGTATCCTAGCATTCA 960 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1198 ATTCTACGATCTTTCCAAATCGATCGGTATAGGAAGAACATCGGAGTATCCTAGCATTCA 1257 Query 961 AAAGATCTCTTTAGAGCTTCTTGAGACATTGCAAGAGTTTCTGAAAGATCAATCGTCGTT 1020 |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| Sbjct 1258 AAAGATCTCTTTAGAGCTTCTTGAGACATTGCAAGAGTTTTTAAAAGATCAATCGTCGTT 1317 Query 1021 TCCAGCGAGCTCGGGGTTGTATCCGTCACCGAATAGTCTTCTTCCTCCGCCTCCATCGTC 1080 |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1318 TCCAGCGAGCTCAGGGTTGTATCCGTCACCGAATAGTTTTCTTCCTCCGCCTCCATCGTC 1377 Query 1081 TAAAGATTCAGCGGTTTCAAGCTCGCTTGATTTTGGAGATTCCACGATTGATACGTCGGA 1140 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1378 CAAAGATTCAGCGGTTTCAAGCTCGCTTGATTTTGGGGATTCCACGATTGATACGTCGGA 1437 Query 1141 GAGGTATTCGGATTACGGGTCGTTTCGTAGTACTTCGTTGGAGGATTTGATGAGCAGGAC 1200 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1438 GAGGTATTCAGATTACGGGTCGTTTCGTAGTACTTCGTTGGAGGATTTGATGAGCAGGAC 1497 Query 1201 TGAAGCAGGGACTAGTAGTCCTCCGATGTCTTGTCATTCTGAGCCTTATGGAGGAGGACG 1260 |||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||| Sbjct 1498 TGAAGCAGGGACTAGTAGTCCTCCAATGTCTTGTCATTCTGAGCCATACGGAGGAGGACG 1557 Query 1261 AGATGATCCTAATGGAAATAATTTCGATACGGTTTCGACTAAATCGCTTCCGAATAATCC 1320 ||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||| Sbjct 1558 AGATGATCCTAATGGGAATAATTTTGATACGGTTTCGACTAAATCGCTTCCCAATAATCC 1617 Query 1321 CTCTGTTTCTGCTTCCAATCTCACATTGGACCTATTGTCCTTGGATGACGTAAGTAACAC 1380 ||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||| Sbjct 1618 CTCTGTTTCTGCTTCCAATCTCATATTAGACCTATTGTCATTGGATGACGTAAGTAACAC 1677 Query 1381 GGCAGAAGCAAAAGATGTTGAAGACAAGAAGAAGCAAGATGATTCTAAGGCAGAGACTTT 1440 |||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 1678 GGCAGAAGCAGAAGATGTTGAAGACAAGAAGAAGCAAGACGATTCAAAGGCAGAGACTTT 1737 Query 1441 CGATCCTTGGGAGGCGTTGATGTTGAGAGATGA 1473 ||||||||||||||||||||||||||||||||| Sbjct 1738 CGATCCTTGGGAGGCGTTGATGTTGAGAGATGA 1770 Score = 723 bits (391), Expect = 0.0 Identities = 477/517 (92%), Gaps = 11/517 (2%) Strand=Plus/Plus Query 1463 TTGAGAGATGAACCTTCAACCTCTGAGG---ATCAAAGAGATTCAGGGAATTGGTTGCTT 1519 ||||| || |||||||||||| |||||| |||| |||||||||||||||||||||||| Sbjct 1794 TTGAG-GAGGAACCTTCAACCGCTGAGGACCATCAGAGAGATTCAGGGAATTGGTTGCTT 1852 Query 1520 GTGCTGGAAGAAACCGCTACGCAGGTGCAGGATAATAACTCGATGGCGATAGTACCGTTC 1579 | | | |||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1853 GCGTTAGAAGAAACTGCTACGCAGGTGCAGGGTAATAACTCGATGGCGATAGTACCGTTC 1912 Query 1580 GGGTTAGATGATCCGATGCCTGCGTTTCAAGCCGCCATGGACCAATACAATCCATTCTTG 1639 ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| Sbjct 1913 GGGTTAGATGATCCGATGCCTGCGTTTCAAGCCGCCACGGACCAATACAACCCATTCTTG 1972 Query 1640 GAAGAACCAGTTGCAG-AGTTAGCTGCAGCCG-AGGAACCAATGACCACGTTCAGTGTCT 1697 |||||||||||||| | |||||||| |||||| || ||||||||| ||||||| ||| || Sbjct 1973 GAAGAACCAGTTGC-GCAGTTAGCTACAGCCGGAG-AACCAATGATCACGTTCGGTGGCT 2030 Query 1698 TGGCTTTGACAGAGTTTCAGCCAGAACCGACGTTTCAGGTGAACGTTCCTGAAGATTTTG 1757 |||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct 2031 TGGCTTTGACAGGGTTTCAGCCAGAACCGACATTTCAGGTGAACGTTCCTGATGATTTTG 2090 Query 1758 AGCCGTCTTCTACACCAACGTTTAAGGCCACGGGGACTTTGCCTGTGGAATGTGACCCAT 1817 ||||||||||||||||||| ||||||||||||| |||||||||| || |||||||||| | Sbjct 2091 AGCCGTCTTCTACACCAACATTTAAGGCCACGGAGACTTTGCCTATGAAATGTGACCCGT 2150 Query 1818 TTACAACATTTGAGAGTACTTTTGGGTTCGGAGAGACATTATCAGAAAATGGAGGGGTAA 1877 ||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||| Sbjct 2151 TTACAACATTTGAGAGT--TTT-GGGTTCGGAGAGACATTTTCAGAAAATGGAGGGGTAA 2207 Query 1878 GTCAACAATCTGTGTTGCAAGAACAGCAGTTATGGTTGCAGAACCAGAAAAAGATCATAG 1937 ||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 2208 ATCAGCAATCTGTATTGCAAGAACAGCAGATATGGTTGCAGAACCAGAAAAAGATCATAG 2267 Query 1938 CCAAGCACTTGAGTTGATaaaaaaaTTATTTGGCTAG 1974 ||||||||||||||||||| |||| |||||||||||| Sbjct 2268 CCAAGCACTTGAGTTGATACAAAATTTATTTGGCTAG 2304 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 97790661660 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5