BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg919257
Length=1470
Score E
Sequences producing significant alignments: (Bits) Value
AT1G05560.1 | Symbols: UGT1, UGT75B1 | UDP-glucosyltransferase ... 2237 0.0
AT1G05562.1 | Symbols: | Potential natural antisense gene, loc... 1954 0.0
AT1G05530.1 | Symbols: UGT75B2, UGT2 | UDP-glucosyl transferase... 1491 0.0
> AT1G05560.1 | Symbols: UGT1, UGT75B1 | UDP-glucosyltransferase
75B1 | chr1:1645498-1647147 REVERSE LENGTH=1650
Length=1650
Score = 2237 bits (1211), Expect = 0.0
Identities = 1375/1453 (95%), Gaps = 15/1453 (1%)
Strand=Plus/Plus
Query 19 aaaaaaaaTGGCGCCACCACATTTTCTACTGGTAACGTTTCCGGCGCAAGGTCACGTGAA 78
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 58 AAAAAAAATGGCGCCACCGCATTTTCTACTGGTAACGTTTCCGGCGCAAGGTCACGTGAA 117
Query 79 CCCATCTCTCCGTTTTGCTCGTCGGCTCATCAAAACAACCGGCGCACGTGTCACTTTCGT 138
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 118 CCCATCTCTCCGTTTTGCTCGTCGGCTCATCAAAAGAACCGGCGCACGTGTCACTTTCGT 177
Query 139 CGCTTGTGTCTCCGTCTTCCACAACTCTATGATCCCAAACCACAACAACGTCGACAATCT 198
| ||||||||||||||||||||||||| |||||| ||||||||||||| ||||| |||||
Sbjct 178 CACTTGTGTCTCCGTCTTCCACAACTCCATGATCGCAAACCACAACAAAGTCGAAAATCT 237
Query 199 CTCTTTCCTTACTTTCTCCGACGGTTTCGACGATGGAGGCATTTCCACCTACGAAGACCG 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 238 CTCTTTCCTTACTTTCTCCGACGGTTTCGACGATGGAGGCATTTCCACCTACGAAGACCG 297
Query 259 TCAGAAAAGGACGGCGAATCTCAAGGTTAACGGCGATAAGGCCCTATCGGAGTTCATCGA 318
|||||||||| ||| ||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct 298 TCAGAAAAGGTCGGTGAATCTCAAGGTTAACGGCGATAAGGCACTATCGGATTTCATCGA 357
Query 319 AGCTAGTAGGAATGGTGACTCTCCGGTGACTTGCGTGATCTACACGATTCTTCTCAATTG 378
||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct 358 AGCTACTAAGAATGGTGACTCTCCCGTGACTTGCTTGATCTACACGATTCTTCTCAATTG 417
Query 379 GGCTCCAAAAGTAGCACGTAGATTTCAACTTCCCTCTGCTCTTCTCTGGATCCAACCGGC 438
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 418 GGCTCCAAAAGTAGCACGTAGATTTCAACTTCCCTCCGCTCTTCTCTGGATCCAACCGGC 477
Query 439 TTTGGTTTTCGACATCTATTACAATCATTTCATGGGAAACAACTCTGTTTTCGAGTTACC 498
|||||||||| |||||||||||| |||||||||||||||||| || ||||||||||||||
Sbjct 478 TTTGGTTTTCAACATCTATTACACTCATTTCATGGGAAACAAGTCCGTTTTCGAGTTACC 537
Query 499 CAATCTTTCTTCACTGGAAATCCGAGATCTTCCTTCTTTCCTCACACCTTCCAACACAAA 558
||||| ||||| ||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct 538 TAATCTGTCTTCTCTGGAAATCAGAGATCTTCCATCTTTCCTCACACCTTCCAACACAAA 597
Query 559 CAAAGCCGCATACGATTCGTTTCAAGAAATGATGGAGTTTCTCATAAAAGAAACCAACCC 618
||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct 598 CAAAGGCGCATACGATGCGTTTCAAGAAATGATGGAGTTTCTCATAAAAGAAACCAAACC 657
Query 619 GAAAATTCTCATCAACACTTTCGATTCGCTGGAGCCAGAGGCCTTAACGGCTTTCCCGAA 678
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 658 GAAAATTCTCATCAACACTTTCGATTCGCTGGAACCAGAGGCCTTAACGGCTTTCCCGAA 717
Query 679 TGTCGAAATGGTGGCGGTTGGTCCTTTACTTCCCGCGGAGATTTTCTCAGGAAG-TGC-- 735
| |||| ||||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct 718 TATCGATATGGTGGCGGTTGGTCCTTTACTTCCCACGGAGATTTTCTCAGGAAGCACCAA 777
Query 736 CAAATCAGTTGAAGATCAAAGTAGTAGTTATACACTTTGGCTAGACTCGAAAACAGAGTC 795
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 778 CAAATCAGTTAAAGATCAAAGTAGTAGTTATACACTTTGGCTAGACTCGAAAACAGAGTC 837
Query 796 CTCTGTTATTTACGTTTCTTTTGGAACAATGGTTGAGTTGTCCAAGAAACAGATAGAGGA 855
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 838 CTCTGTTATTTACGTTTCCTTTGGAACAATGGTTGAGTTGTCCAAGAAACAGATAGAGGA 897
Query 856 GCTCGCGAGAGCACTCATAGAAGGGAAAAGACCGTTTTTGTGGGTTATAACTGATAAAGC 915
|| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 898 ACTAGCGAGAGCACTCATAGAAGGGAAACGACCGTTTTTGTGGGTTATAACTGATAAATC 957
Query 916 CAACAGAGAAACGAAAACAGAAGGTGAAGAAGAGACAGAGATTGAGAAGATAGCTGGTTT 975
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 958 CAACAGAGAAACGAAAACAGAAGGAGAAGAAGAGACAGAGATTGAGAAGATAGCTGGATT 1017
Query 976 CAGACACGAGCTTGAAGAGGTTGGGATGATTGTGTCGTGGTGTTCTCAGATAGAGGTTTT 1035
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1018 CAGACACGAGCTTGAAGAGGTTGGGATGATTGTGTCGTGGTGTTCGCAGATAGAGGTTTT 1077
Query 1036 AAGTCACCGAGCCGTAGGTTGTTTTGTGACTCATTGTGGGTGGAGCTCGACGCTGGAGAG 1095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1078 AAGTCACCGAGCCGTAGGTTGTTTTGTGACTCATTGTGGGTGGAGCTCGACGCTGGAGAG 1137
Query 1096 TTTGGTTCTTGGCGTTCCGGTTGTGGCGTTTCCGATGTGGTCGGATCAACCGACGAACGC 1155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1138 TTTGGTTCTTGGCGTTCCGGTTGTGGCGTTTCCGATGTGGTCGGATCAACCGACGAACGC 1197
Query 1156 TAAGCTACTGGAAGAAAGTTGGAAGACAGGTGTGAGGGTAAGAGAGAATGAGGAAGGTTT 1215
|||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||
Sbjct 1198 GAAGCTACTGGAAGAAAGTTGGAAGACTGGTGTGAGGGTAAGAGAGAACAAGGATGGTTT 1257
Query 1216 GGTGGAAAGAGGAGAGATAAGGAGGTGTTTGGAAGCAGTGATGGAGGAGAAGTTGGTGGA 1275
|||||| ||||||||||| ||||||||||||||||| |||||||||||||||| ||||||
Sbjct 1258 GGTGGAGAGAGGAGAGATCAGGAGGTGTTTGGAAGCCGTGATGGAGGAGAAGTCGGTGGA 1317
Query 1276 GCTGAGGGAAAACGCAAAGAAATGGAAGCGTTTAGCGATTGAAGCAGG-AGGAGAAGGAG 1334
| ||||||||||||||||||||||||||||||||||||| ||||| || || ||||||||
Sbjct 1318 GTTGAGGGAAAACGCAAAGAAATGGAAGCGTTTAGCGATGGAAGCGGGTAG-AGAAGGAG 1376
Query 1335 GATCTTTGGATAAGAACATGGAGGCTTTTGTGGAGGAGATTTGTGGAGACTCTCTTGTTC 1394
|||||| |||||||||||||||||||||||||||||| ||||||||||| |||||| |||
Sbjct 1377 GATCTTCGGATAAGAACATGGAGGCTTTTGTGGAGGATATTTGTGGAGAATCTCTTATTC 1436
Query 1395 AAAGGTTGTGTGAAGCAGAGGATGT-----TAAAGTAAAC---G-ACAAAAGAGTTGGTG 1445
||| ||||||||||||||||| || ||||||||| | |||||||||||||||
Sbjct 1437 AAAACTTGTGTGAAGCAGAGGAGGTAAAAGTAAAGTAAATAAAGGACAAAAGAGTTGGTG 1496
Query 1446 TCTAGAAAGTGGC 1458
||||||| |||||
Sbjct 1497 TCTAGAA-GTGGC 1508
> AT1G05562.1 | Symbols: | Potential natural antisense gene, locus
overlaps with AT1G05560 | chr1:1645875-1647162 FORWARD
LENGTH=1288
Length=1288
Score = 1954 bits (1058), Expect = 0.0
Identities = 1164/1216 (96%), Gaps = 3/1216 (0%)
Strand=Plus/Minus
Query 19 aaaaaaaaTGGCGCCACCACATTTTCTACTGGTAACGTTTCCGGCGCAAGGTCACGTGAA 78
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1216 AAAAAAAATGGCGCCACCGCATTTTCTACTGGTAACGTTTCCGGCGCAAGGTCACGTGAA 1157
Query 79 CCCATCTCTCCGTTTTGCTCGTCGGCTCATCAAAACAACCGGCGCACGTGTCACTTTCGT 138
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1156 CCCATCTCTCCGTTTTGCTCGTCGGCTCATCAAAAGAACCGGCGCACGTGTCACTTTCGT 1097
Query 139 CGCTTGTGTCTCCGTCTTCCACAACTCTATGATCCCAAACCACAACAACGTCGACAATCT 198
| ||||||||||||||||||||||||| |||||| ||||||||||||| ||||| |||||
Sbjct 1096 CACTTGTGTCTCCGTCTTCCACAACTCCATGATCGCAAACCACAACAAAGTCGAAAATCT 1037
Query 199 CTCTTTCCTTACTTTCTCCGACGGTTTCGACGATGGAGGCATTTCCACCTACGAAGACCG 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1036 CTCTTTCCTTACTTTCTCCGACGGTTTCGACGATGGAGGCATTTCCACCTACGAAGACCG 977
Query 259 TCAGAAAAGGACGGCGAATCTCAAGGTTAACGGCGATAAGGCCCTATCGGAGTTCATCGA 318
|||||||||| ||| ||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct 976 TCAGAAAAGGTCGGTGAATCTCAAGGTTAACGGCGATAAGGCACTATCGGATTTCATCGA 917
Query 319 AGCTAGTAGGAATGGTGACTCTCCGGTGACTTGCGTGATCTACACGATTCTTCTCAATTG 378
||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct 916 AGCTACTAAGAATGGTGACTCTCCCGTGACTTGCTTGATCTACACGATTCTTCTCAATTG 857
Query 379 GGCTCCAAAAGTAGCACGTAGATTTCAACTTCCCTCTGCTCTTCTCTGGATCCAACCGGC 438
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 856 GGCTCCAAAAGTAGCACGTAGATTTCAACTTCCCTCCGCTCTTCTCTGGATCCAACCGGC 797
Query 439 TTTGGTTTTCGACATCTATTACAATCATTTCATGGGAAACAACTCTGTTTTCGAGTTACC 498
|||||||||| |||||||||||| |||||||||||||||||| || ||||||||||||||
Sbjct 796 TTTGGTTTTCAACATCTATTACACTCATTTCATGGGAAACAAGTCCGTTTTCGAGTTACC 737
Query 499 CAATCTTTCTTCACTGGAAATCCGAGATCTTCCTTCTTTCCTCACACCTTCCAACACAAA 558
||||| ||||| ||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct 736 TAATCTGTCTTCTCTGGAAATCAGAGATCTTCCATCTTTCCTCACACCTTCCAACACAAA 677
Query 559 CAAAGCCGCATACGATTCGTTTCAAGAAATGATGGAGTTTCTCATAAAAGAAACCAACCC 618
||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct 676 CAAAGGCGCATACGATGCGTTTCAAGAAATGATGGAGTTTCTCATAAAAGAAACCAAACC 617
Query 619 GAAAATTCTCATCAACACTTTCGATTCGCTGGAGCCAGAGGCCTTAACGGCTTTCCCGAA 678
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 616 GAAAATTCTCATCAACACTTTCGATTCGCTGGAACCAGAGGCCTTAACGGCTTTCCCGAA 557
Query 679 TGTCGAAATGGTGGCGGTTGGTCCTTTACTTCCCGCGGAGATTTTCTCAGGAAG-TGC-- 735
| |||| ||||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct 556 TATCGATATGGTGGCGGTTGGTCCTTTACTTCCCACGGAGATTTTCTCAGGAAGCACCAA 497
Query 736 CAAATCAGTTGAAGATCAAAGTAGTAGTTATACACTTTGGCTAGACTCGAAAACAGAGTC 795
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 496 CAAATCAGTTAAAGATCAAAGTAGTAGTTATACACTTTGGCTAGACTCGAAAACAGAGTC 437
Query 796 CTCTGTTATTTACGTTTCTTTTGGAACAATGGTTGAGTTGTCCAAGAAACAGATAGAGGA 855
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 436 CTCTGTTATTTACGTTTCCTTTGGAACAATGGTTGAGTTGTCCAAGAAACAGATAGAGGA 377
Query 856 GCTCGCGAGAGCACTCATAGAAGGGAAAAGACCGTTTTTGTGGGTTATAACTGATAAAGC 915
|| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 376 ACTAGCGAGAGCACTCATAGAAGGGAAACGACCGTTTTTGTGGGTTATAACTGATAAATC 317
Query 916 CAACAGAGAAACGAAAACAGAAGGTGAAGAAGAGACAGAGATTGAGAAGATAGCTGGTTT 975
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 316 CAACAGAGAAACGAAAACAGAAGGAGAAGAAGAGACAGAGATTGAGAAGATAGCTGGATT 257
Query 976 CAGACACGAGCTTGAAGAGGTTGGGATGATTGTGTCGTGGTGTTCTCAGATAGAGGTTTT 1035
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 256 CAGACACGAGCTTGAAGAGGTTGGGATGATTGTGTCGTGGTGTTCGCAGATAGAGGTTTT 197
Query 1036 AAGTCACCGAGCCGTAGGTTGTTTTGTGACTCATTGTGGGTGGAGCTCGACGCTGGAGAG 1095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 196 AAGTCACCGAGCCGTAGGTTGTTTTGTGACTCATTGTGGGTGGAGCTCGACGCTGGAGAG 137
Query 1096 TTTGGTTCTTGGCGTTCCGGTTGTGGCGTTTCCGATGTGGTCGGATCAACCGACGAACGC 1155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 136 TTTGGTTCTTGGCGTTCCGGTTGTGGCGTTTCCGATGTGGTCGGATCAACCGACGAACGC 77
Query 1156 TAAGCTACTGGAAGAAAGTTGGAAGACAGGTGTGAGGGTAAGAGAGAATGAGGAAGGTTT 1215
|||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||
Sbjct 76 GAAGCTACTGGAAGAAAGTTGGAAGACTGGTGTGAGGGTAAGAGAGAACAAGGATGGTTT 17
Query 1216 GGTGGAAAGAGGAGAG 1231
|||||| |||||||||
Sbjct 16 GGTGGAGAGAGGAGAG 1
> AT1G05530.1 | Symbols: UGT75B2, UGT2 | UDP-glucosyl transferase
75B2 | chr1:1636496-1637863 REVERSE LENGTH=1368
Length=1368
Score = 1491 bits (807), Expect = 0.0
Identities = 1192/1372 (87%), Gaps = 50/1372 (4%)
Strand=Plus/Plus
Query 26 ATGGCGCCACCACATTTTCTACTGGTAACGTTTCCGGCGCAAGGTCACGTGAACCCATCT 85
||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCGCAACCGCATTTTCTACTGGTAACGTTTCCGGCGCAAGGTCACGTGAACCCATCT 60
Query 86 CTCCGTTTTGCTCGTCGGCTCATCAAAACAACCGGCGCACGTGTCACTTTCGTCGCTTGT 145
|||||||||||||||||||||||||||||||| ||||||||||| ||||||| | | |||
Sbjct 61 CTCCGTTTTGCTCGTCGGCTCATCAAAACAACTGGCGCACGTGTAACTTTCGCCACGTGT 120
Query 146 GTCTCCGTC-TTCCACAACTCTATGATCCCAAACCACAACAACGTCGACAATCTCTCTTT 204
|||| ||| || ||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct 121 CTCTCTGTCATT-CACCGCTCTATGATCCCAAACCACAACAACGTCGAAAATCTCTCTTT 179
Query 205 CCTTACTTTCTCCGACGGTTTCGACGATGGAGGCATTTCCACCTA-CGAAGACCGT-CAG 262
|||||||||||||||||| |||||||| |||| ||| |||| | | ||| || ||| ||
Sbjct 180 CCTTACTTTCTCCGACGGATTCGACGACGGAGTCATCTCCAAC-ACCGACGA-CGTCCA- 236
Query 263 AAA-AGGACGGCGA-ATC-TC-AAGGTTAACGGCGATAAGGCCCTATCGGAGTTCATCGA 318
||| || || | | | || || | ||| |||||||| || |||||||| ||||||||
Sbjct 237 AAACCGGTTGG-TACA-CTTCGAACG-TAATGGCGATAAAGCTCTATCGGATTTCATCGA 293
Query 319 AGCTAGT-AGGAATGGTGACTCTCCGGTGACTTGCGTGATCTACACGATTCTTCTCAATT 377
||||| | | ||||||||||||||| || | |||| |||||||||||||||||| ||| |
Sbjct 294 AGCTAATCA-GAATGGTGACTCTCCCGTAAGTTGCTTGATCTACACGATTCTTCCCAACT 352
Query 378 GGGCTCCAAAAGTAGCACGTAGATTTCAACTTCCCTCTGCTCTTCTCTGGATCCAACCGG 437
||| ||||||||| || ||||||||||| |||||||||| || ||||||||||||||| |
Sbjct 353 GGGTTCCAAAAGTGGCGCGTAGATTTCATCTTCCCTCTGTTCATCTCTGGATCCAACCAG 412
Query 438 CTTTGGTTTTCGACATCTATTACAATCATTTC-ATGGGAAACAACTCTGTTTTCGAGTTA 496
| || | ||||||||| ||||||||| | || | ||||||||||| |||||||||||
Sbjct 413 CCTTCGCTTTCGACATTTATTACAATTA-CTCTACAGGAAACAACTCCGTTTTCGAGTT- 470
Query 497 CCC-AATCTTTCTTCACTGGAAATCCGAGATCTTCCTTCTTTCCTCACACCTTCCAACAC 555
||| ||||| |||| || |||||||| ||||| |||||||||||| |||||||||||||
Sbjct 471 CCCGAATCTACCTTCTCTCGAAATCCGCGATCTGCCTTCTTTCCTCTCACCTTCCAACAC 530
Query 556 AAACAAAGCCGCATACG-ATTCGTTTCAAGAAATGATGGAGTTTCTCATAA-AAGAAACC 613
|||||||||||| | | | | | ||||||| ||||||| ||||||| || ||||| |
Sbjct 531 GAACAAAGCCGCACAAGCAGT-ATATCAAGAACTGATGGATTTTCTCA-AAGAAGAATCT 588
Query 614 AACCCGAAAATTCTCATCAACACTTTCGATTCGCTGGAGCCAGAGGCCTTAACGGCT-TT 672
||||||||||||||| ||||||| ||||||||||||||||||||| |||||| ||| ||
Sbjct 589 AACCCGAAAATTCTCGTCAACACATTCGATTCGCTGGAGCCAGAGTTCTTAACAGCTATT 648
Query 673 CCCGAATGTCGAAATGGTGGCGGTTGGTCCTTTACTTCCCGCGGAGATTTTCTCAGGAAG 732
|||||| | ||||||||||| ||||||||||||||||| |||||||||||| | |||||
Sbjct 649 -CCGAATATAGAAATGGTGGCAGTTGGTCCTTTACTTCCTGCGGAGATTTTCACTGGAAG 707
Query 733 TG--CCA---AATCA-GT-T---GA-A-GATCAAAGTAGTAGTTATACACTTTGGCTAGA 780
| || || | | | || | |||||||||||||||||||||||||| ||||
Sbjct 708 CGAATCAGGTAAAGATTTATCAAGAGATCATCAAAGTAGTAGTTATACACTTTGGTTAGA 767
Query 781 CTCGAAAACAGAGTCCTCTGTTATTTACGTTTCTTTTGGAACAATGGTTGAGTTGTCCAA 840
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 768 CTCGAAAACAGAGTCCTCTGTTATTTATGTTTCTTTTGGAACAATGGTTGAGTTGTCGAA 827
Query 841 GAAACAGATAGAGGAGCTCGCGAGAGCACTCATAGAAGGGAAAAGACCGTTTTTGTGGGT 900
||||||||||||||| || ||||||||||||||||||||| ||||||||| ||||||||
Sbjct 828 GAAACAGATAGAGGAACTAGCGAGAGCACTCATAGAAGGGGGAAGACCGTTCTTGTGGGT 887
Query 901 TATAACTGATAAAGC-CAACAGAGAAACGAAAACAGAAGGTGAAGAAGAGACAGAGATTG 959
||||||||||||| | |||||||||| |||||| |||||| |||||||||||||||||||
Sbjct 888 TATAACTGATAAA-CTCAACAGAGAAGCGAAAATAGAAGGAGAAGAAGAGACAGAGATTG 946
Query 960 AGAAGATAGCTGGTTTCAGACACGAGCTTGAAGAGGTTGGGATGATTGTGTCGTGGTGTT 1019
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct 947 AGAAGATAGCTGGTTTTAGACACGAGCTTGAAGAGGTTGGGATGATTGTCTCGTGGTGTT 1006
Query 1020 CTCAGATAGAGGTTTTAAGTCACCGAGCCGTAGGTTGTTTTGTGACTCATTGTGGGTGGA 1079
| |||||||||||||| || ||||||||| ||||||||||| ||||||||||||||||||
Sbjct 1007 CGCAGATAGAGGTTTTGAGACACCGAGCCATAGGTTGTTTTTTGACTCATTGTGGGTGGA 1066
Query 1080 GCTCGA-CGCTGGAGAGTTTGGTTCTTGGCGTTCCGGTTGTGGCGTTTCCGATGTGGTCG 1138
|||| | | ||||||||||||||||| |||||||| || |||||||||||||||||||||
Sbjct 1067 GCTC-ATCACTGGAGAGTTTGGTTCTCGGCGTTCCAGTGGTGGCGTTTCCGATGTGGTCG 1125
Query 1139 GATCAACC-GACGAACGCTAAGCTACTGGAAGAAAGT-TGGAAGACAGGTGTGAGGGTAA 1196
||||| || | | || || ||||| ||||||||| | |||||||||||||||||||| |
Sbjct 1126 GATCAGCCAG-CAAATGCGAAGCTTTTGGAAGAAA-TATGGAAGACAGGTGTGAGGGTGA 1183
Query 1197 GAGAGAA-TGAGGAAGGTTTGGTGGAAAGAGGAGAGATAAGGAGGTGTTTGGAAGCAGTG 1255
||||||| | ||||||||| || || ||||||||||||| | |||||||||||||||||
Sbjct 1184 GAGAGAACTC-GGAAGGTTTAGTAGAGAGAGGAGAGATAATGCGGTGTTTGGAAGCAGTG 1242
Query 1256 ATGGAGGAGAAGTTGGTGGAGCTGAGGGAAAACGCAAAGAAATGGAAGCGTTTAGCGATT 1315
||||||| ||| | |||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct 1243 ATGGAGGCGAAATCGGTGGAGCTGAGGGAAAACGCAGAGAAATGGAAGCGTTTAGCGACT 1302
Query 1316 GAAGCAGG-AGGAGAAGGAGGATCTTTGGATAAGAACATGGAGGCTTTTGTG 1366
||||| || || |||||||||||||| ||| ||||| |||| |||||||||
Sbjct 1303 GAAGCGGGTAG-AGAAGGAGGATCTTCGGACAAGAATGTGGAAGCTTTTGTG 1353
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 72489586980
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5