BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg919261
Length=2642
Score E
Sequences producing significant alignments: (Bits) Value
AT1G05580.1 | Symbols: ATCHX23, CHX23 | cation/H+ exchanger 23 ... 4296 0.0
AT2G31910.1 | Symbols: ATCHX21, CHX21 | cation/H+ exchanger 21 ... 968 0.0
> AT1G05580.1 | Symbols: ATCHX23, CHX23 | cation/H+ exchanger 23
| chr1:1665464-1668902 REVERSE LENGTH=2842
Length=2842
Score = 4296 bits (2326), Expect = 0.0
Identities = 2539/2644 (96%), Gaps = 5/2644 (0%)
Strand=Plus/Plus
Query 1 ACCAGCCATCGTAGGAGGAGATGTCTTCCGGAGCCCCCCTTAATGTGACGAATCCTAGCT 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct 89 ACCAGCCATCGTAGGAGGAGATGTCTTCCGGAGCCCCCCTTAATGTGACAAATCCTAACT 148
Query 61 ATGATATTG-AGATATCGCGTTTTGGAAAAATTGTGTGTTATGATCAAAGTCTTCTCTTT 119
||||||||| ||| ||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 149 ATGATATTGAAGA-ATCGCGTTTTGGAAAGATTGTGTGTTATGACCAAAGTCTTCTCTTT 207
Query 120 GAGAAGAGAGAACAAAAGGGATGGGAGAGCGGAAGTACGCTCGCCTCTTCCCTTCCGTTC 179
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 208 GAGAAGAGAGAACAAAAGGGATGGGAGAGCGGAAGTACGCTAGCCTCTTCCCTTCCGTTC 267
Query 180 TTCATAACGCAACTCTTTGTCGCGAACCTTAGCTATCGCGTCCTCTACTATATAACCCGA 239
|||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct 268 TTCATAACGCAACTCTTTGTCGCGAACCTTAGCTATCGTGTCCTCTACTATCTAACCCGA 327
Query 240 CCCTTTTATCTTCCTCCTTTCGTAGCTCAAATCCTCTGTGGATTATTATTTAGCCCAAGT 299
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 328 CCCTTGTATCTTCCTCCTTTCGTAGCTCAGATCCTCTGTGGATTATTATTTAGCCCAAGT 387
Query 300 GTGCTTGGGAACACACCTTTCATAGTCACCCATGTATTCCCCTACAGATTCACAATGGTT 359
||||| |||||||||| ||||||| || | ||||||||||||||||||||||||||||||
Sbjct 388 GTGCTCGGGAACACACGTTTCATAATCGCACATGTATTCCCCTACAGATTCACAATGGTT 447
Query 360 CTTGAGACATTCGCAAACTTAGCTCTTGTCTACAACATCTTCCTCCTTGGTCTAGGGATG 419
|||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 448 CTTGAGACATTCGCTAACTTAGCTCTCGTCTACAACATCTTCCTCCTTGGTCTAGGGATG 507
Query 420 GACCTGAGGATGGTGCGGATCACCGAGCTCAAACCGGTCATCATCGCCTTTGCGGGGCTT 479
|||||||||||||||||||||||||||||||||||||||||||| || ||| | ||||||
Sbjct 508 GACCTGAGGATGGTGCGGATCACCGAGCTCAAACCGGTCATCATTGCTTTTACAGGGCTT 567
Query 480 CTTGTTGCTTTACCTGTTGGTGCCTTTCTTTACTATCTCCCGGGAAATGGCCATCCAGAC 539
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 568 CTTGTTGCTTTACCGGTTGGTGCCTTTCTTTACTATCTCCCGGGAAATGGCCATCCAGAC 627
Query 540 AAGATCATCTCTGGTTGCGTCTTCTGGTCTGTCGCGCTAGCCTGTACCAACTTCCCTGAC 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 628 AAGATCATCTCTGGTTGCGTCTTCTGGTCTGTCGCGCTAGCCTGTACCAACTTCCCTGAC 687
Query 600 CTGGCAAGGATCCTTGCGGATCTTAAGCTTTTGCGGTCCGATATGGGCCGTACGGCCATG 659
|| |||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||
Sbjct 688 CTTGCAAGGATCCTTGCGGATCTTAAGCTGTTGCGGTCCGATATGGGTCGTACGGCTATG 747
Query 660 TGTGCAGCCATTATCACTGATTTGTGCACATGGGTCCTCCTCGTTTTTGGGTTCGCTTCT 719
|||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 748 TGTGCAGCCATTGTCACTGATTTGTGCACATGGGTCCTCCTTGTTTTTGGGTTTGCTTCT 807
Query 720 TTTAGCAAAGCAGGGACATGGAACAAATTTATGCCGTTCGTGATAGTCGTCACCGCAATC 779
||||||||| ||||||||||||||||| | ||||||||||||||| || ||||||||||
Sbjct 808 TTTAGCAAATCAGGGACATGGAACAAAATGATGCCGTTCGTGATAATCACCACCGCAATC 867
Query 780 TTCGTCCTCCTCTGCATATTTGTGATCCGTCCGGGAATAGCATGGATCTTCTCCAAGACC 839
||||||||||||||||| |||||||||||||||||||| |||||||||||| | ||||||
Sbjct 868 TTCGTCCTCCTCTGCATCTTTGTGATCCGTCCGGGAATTGCATGGATCTTCGCGAAGACC 927
Query 840 GTGAAGGCAGGTCACGTCGGAGACACCCACGTTTGGTTCATTTTAGGAGGTGTGGTCCTA 899
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 928 GTGAAGGCAGGTCACGTCGGAGACACTCACGTTTGGTTCATTTTAGGAGGTGTGGTCCTA 987
Query 900 TGCGGCCTGATCACAGACGCATGCGGGGTCCACTCCATAACCGGGGCATTCCTGTTCGGT 959
||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 988 TGCGGCCTGATTACGGACGCATGCGGGGTCCACTCCATAACCGGGGCGTTCCTGTTCGGT 1047
Query 960 CTCTCCATTCCGCACGACCACATCATACGTAACATGATCGAGGAGAAGCTCCATGACTTC 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1048 CTCTCCATTCCGCACGACCACATCATACGTAACATGATCGAGGAGAAGCTCCATGACTTC 1107
Query 1020 CTCTCCGGGATCCTTATGCCTCTCTTCTACATCATTTGTGGGTTACGAGCAGATATTGGT 1079
|| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1108 CTTTCCGGGATCCTTATGCCTCTCTTCTACATCATTTGTGGGTTGCGAGCAGATATTGGT 1167
Query 1080 TTCATGCTCGACTACACTGACAAGTTCATGATGGTTGTAGTCATTTGCTCTTCCTTCTTA 1139
||||||||| | | ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1168 TTCATGCTCCAGTTTACTGACAAGTTCATGATGGTTGTAGTCATCTGCTCTTCCTTCTTA 1227
Query 1140 GTAAAGATCGTGACTACCGTGGTCACCTCTTTATTCATGCATATGCCTATGCGTGACGCA 1199
|||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||
Sbjct 1228 GTAAAGATCGTGACTACCGTAATCACCTCTTTATTTATGCATATACCTATGCGTGACGCA 1287
Query 1200 TTCGCTATCGGAGCCCTTATGAACACCAAGGGAACTTTATCGCTGGTCGTTCTTAATGCT 1259
|||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1288 TTCGCTATAGGAGCCCTTATGAACACCAAGGGAACTTTATCGCTCGTCGTTCTTAATGCT 1347
Query 1260 GGTCGCGATACTAAGGCGCTGGATAGTCCAATGTATACTCATATGACGATCGCGCTTCTA 1319
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1348 GGTCGCGATACTAAGGCGCTGGATAGTCCGATGTATACTCATATGACGATCGCGCTTCTA 1407
Query 1320 GTGATGTCACTAGTCGTCGAGCCTCTTCTCGCGGTTGCATACAAGCCCAAGAAAAAACTT 1379
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1408 GTGATGTCACTAGTCGTCGAGCCTCTTCTCGCGTTTGCATACAAGCCCAAGAAAAAACTT 1467
Query 1380 GTTCATTACAAGTACCGTACGGTCCAAAAGATCAAAGGAGAAACAGAGTTTCGCGTCTTA 1439
| |||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct 1468 GCTCATTACAAGCACCGTACGGTTCAAAAGATCAAAGGAGAAACAGAGTTGCGCGTCTTA 1527
Query 1440 GCTTGCGTCCATATACTCCCCAATGTCTCTGGGATCACCAATCTCTTACAAGTCTCAAAC 1499
|||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1528 GCTTGCGTCCATGTACTCCCCAATGTCTCTGGGATCACAAATCTCTTACAAGTCTCAAAC 1587
Query 1500 CCAACCAAACAATCACCTCTCAGCGTTTTCGCCATTCACCTCGTGGAGCTCACCGGTCGA 1559
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1588 GCAACCAAACAATCACCTCTCAGCGTTTTCGCCATTCACCTCGTGGAGCTCACCGGTCGA 1647
Query 1560 ACCACGGCCTCGCTGCTAATCATGAACGACGAATGCAAACCAAAAGCTAACTTCTCGGAC 1619
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1648 ACCACGGCCTCTCTGCTAATCATGAACGACGAATGCAAACCAAAAGCTAACTTCTCGGAC 1707
Query 1620 AGAGTCAGAGCAGAGTCCGACCAAATCGCTGAGACCTTCGAAGCTATGGAAGTCAACAAC 1679
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1708 AGAGTCAGAGCAGAGTCCGATCAAATCGCTGAGACCTTCGAAGCTATGGAAGTCAACAAC 1767
Query 1680 GACGCAATGACGGTTCAGACCATCACCGCAGTCTCTCCTTACGCAACCATGCACGAAGAT 1739
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1768 GACGCAATGACGGTTCAGACCATCACCGCGGTCTCTCCTTACGCAACCATGCACGAAGAC 1827
Query 1740 ATCTGCGCGTTAGCCGAGGACAAGCGAGTTTGTTTCATCATATTGCCTTACCACAAACAC 1799
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1828 ATCTGCGTGTTAGCCGAGGACAAGCGAGTTTGTTTCATCATATTGCCTTACCACAAACAC 1887
Query 1800 TTGACACCGGACGGTCGGATGGGAGAAGGAAACTCTTCTCACGCTGAAATTAACCAAAAC 1859
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1888 TTGACACCGGACGGTCGGATGGGAGAAGGAAACTCTTCTCACGCAGAAATTAACCAAAAC 1947
Query 1860 GTTTTGAGCCACGCCCCTTGCTCGGTCGGGATTTTAGTGGACCGTGGTATGGCCATGGTC 1919
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 1948 GTTTTGAGCCACGCCCCTTGCTCGGTCGGGATTTTGGTGGACCGTGGCATGGCCATGGTC 2007
Query 1920 CGGTCTGAGTCGTTCCGTGGTGAAGCAATGAAAAGAGAAGTCGCAATGCTCTTCGTGGGT 1979
|||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||
Sbjct 2008 CGGTCTGAGTCGTTCCGTGGTGAATCAATGAAAAGAGAAGTCGCCATGCTCTTCGTCGGT 2067
Query 1980 GGTCCAGACGACCGCGAGGCGTTATCATACGCCTGGCGAATGGTCGGACAACACGTGATT 2039
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2068 GGTCCAGACGACCGCGAGGCGTTATCATACGCTTGGCGAATGGTCGGACAACACGTGATT 2127
Query 2040 AAACTCACTGTGGTAAGATTCGTCCCTGGACGCGAAGCTCTAATCTCGTCCGGGAAAGTT 2099
|||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct 2128 AAACTCACTGTGGTAAGATTCGTCCCAGGACGCGAAGCTCTAATCTCATCCGGGAAAGTT 2187
Query 2100 GCAGCGGAGTACGAGAGGGAGAAACAAGTCGACGATGAGTGCATCTACGAATTTAATTTC 2159
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2188 GCAGCGGAGTACGAGAGGGAGAAACAAGTCGACGATGAATGCATCTACGAATTTAATTTC 2247
Query 2160 AAGACAATGAATGATTCTTCCGTTAAATATATCGAAAAAGTGGTCAACGATGGTCAAGAC 2219
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 2248 AAGACAATGAATGATTCTTCCGTTAAATATATAGAGAAAGTGGTCAACGATGGTCAAGAC 2307
Query 2220 ACGATCTCTACGATCAGAGAAATGGAAGACAACAATTCTTATGATCTTTACGTTGTCGGA 2279
||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2308 ACGATAGCTACGATCAGAGAAATGGAAGACAACAATTCTTATGATCTTTACGTTGTGGGA 2367
Query 2280 AGAGGATATAACTCAGAAACTCCGGTGACTGCCGGTTTAAACGATTGGAGCAGTAGTCCT 2339
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2368 AGAGGATATAACTCAGATTCTCCGGTGACTGCCGGTTTAAACGATTGGAGCAGTAGTCCT 2427
Query 2340 GAGCTAGGCACAATAGGGGACACATTAGCTTCGTCGAATTTCACAATGCATGCTTCGGTA 2399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2428 GAGCTAGGCACAATAGGGGACACATTAGCTTCGTCGAATTTCACAATGCATGCTTCGGTA 2487
Query 2400 TTAGTCATTCAACAATACTCTGCCACTAAAAGACAAGCTGCAGTCACAGCAGCCGCCGCA 2459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2488 TTAGTCATTCAACAATACTCTGCCACTAAAAGACAAGCTGCAGTCACAGCAGCCGCCGCA 2547
Query 2460 ACAACCGTTGTGGGAGCGGTCGCTGGTGCTACCGTTAACAATCAAGAACCCGTTGGTGGT 2519
||||||||| ||||||||||||| |||| ||| | |||||||| |||| ||| |||||||
Sbjct 2548 ACAACCGTTATGGGAGCGGTCGCCGGTGTTACAGGTAACAATCTAGAATCCGCTGGTGGT 2607
Query 2520 GGGGCTAAGACGCCTCGTGATGCT---GAGCCATTTATGAAGTCTATGTATGAAGACGAA 2576
| ||||||| | ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2608 GATGCTAAGATGACTCGTGATGCTCATGAGCCATTTATGAAGTCTATGTATGAAGACGAA 2667
Query 2577 GATGAAGATGATGAAGAAGATCATCAATATGGAATTCATAGGTAATGAGTTTTATACATA 2636
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2668 GATGAAGATGATGAAGAGGATCATCAATATGGAATTCATAGGTAATGAGTTTTATACGTA 2727
Query 2637 TATG 2640
||||
Sbjct 2728 TATG 2731
> AT2G31910.1 | Symbols: ATCHX21, CHX21 | cation/H+ exchanger 21
| chr2:13571044-13574019 FORWARD LENGTH=2499
Length=2499
Score = 968 bits (524), Expect = 0.0
Identities = 1751/2334 (75%), Gaps = 122/2334 (5%)
Strand=Plus/Plus
Query 173 TCCGTTCTTCATAACGCAACTCTTTGTCGCGAACCTTAGCTATCGCGTCCTCTACTATAT 232
||| ||||| || |||||||| | |||||| || |||| ||| ||| | ||||||||| |
Sbjct 111 TCCTTTCTTTATGACGCAACTGTCTGTCGCTAATCTTACCTACCGCATACTCTACTAT-T 169
Query 233 AACCCGACCCT-TTTATCTTCCTCCTTTCGTAGCTCAAATCCTCTGTGGATTATTATTTA 291
| | ||| | | ||||||||||||||| |||||||| || || |||||| | || |
Sbjct 170 TTCTTAAGCCTCTATGTCTTCCTCCTTTCGTCGCTCAAATACTTTGCGGATTACTGTTCA 229
Query 292 GCCCAAGTGTGCTTGGGAA-CAC-ACCT-TTCATAGTCACCCATGTATTCCCCTACAGAT 348
|||| | |||||| || || || | | || | | | | | ||||||| || | ||
Sbjct 230 GCCCGACTGTGCTCGGCAATAACGAAGTGGTCCT--T-AAACTTATATTCCCTTATAAAT 286
Query 349 -TCACAATGGTTCTTGAGACATTCGCAAACTTAGCTCTTGTCTACAACATCTTCCTCCTT 407
| |||||| |||||||||||||||||||||||||||| || |||||| | ||||||||
Sbjct 287 AT-ACAATGCTTCTTGAGACATTCGCAAACTTAGCTCTCGTTTACAACGTTTTCCTCCTC 345
Query 408 GGTCTAGGGATGGACCTGAGGATGGTGCGGATCACCGAGC-TCAAACCGGTCATCATCGC 466
||||| || ||||| |||||||| | ||||| || | ||||||| || ||||| ||
Sbjct 346 GGTCTCGGCTTGGACTTGAGGATGATAAAGATCAAAGA-CATCAAACCAGTGATCATAGC 404
Query 467 CTTTGCGGGGCTTCTTGTTGCTTTACCTGTTGGTGCCTTTCTT-TACTATCT-CCCGGGA 524
| ||| || || |||| ||||||| || ||||| | ||| ||||| || ||| | |
Sbjct 405 CATTGTTGGCCTCCTTGCGGCTTTACTTGCCGGTGC-TGGCTTATACTACCTTCCCAGTA 463
Query 525 AATGGCCAT-CCAGACAAGATCATCTCTGGTTGCGTCTTCTGGTCTG-TCGCGCTAGCCT 582
| || | || ||||| ||| | | ||||| | | |||||| | |||| | | ||
Sbjct 464 AC-GGAGAGGCC-GACAAAATCCTAGCAGGTTGTATGTACTGGTC-GATCGCATTTGGCT 520
Query 583 GTACCAACTTCCCTGACCTGGCAAGGATCCTTGCGGATCTTAAGCTTTTGCGGTCCG-AT 641
|||| || |||||||| || || ||||| ||||||||||| ||||| ||||| | || ||
Sbjct 521 GTACAAATTTCCCTGATCTTGCTAGGATTCTTGCGGATCTCAAGCTCTTGCG-TACGGAT 579
Query 642 ATGGGCCGTACGGCCATGTGTGCAGCCATTATCACTGATTTGTGCACATGGGTCCTCCTC 701
||||| | ||| || |||||||||||| || | |||||||||||||| ||| | ||| ||
Sbjct 580 ATGGGACATACTGCAATGTGTGCAGCCGTTGTTACTGATTTGTGCACTTGGATTCTCTTC 639
Query 702 GTTTTTGGGTTCGC--TTCTTTTAGCAAAGCAGG-G-ACATGGAAC-AAATTTATGCCGT 756
||||||| | || || |||| |||| | || | || | ||| |||| | |||| |
Sbjct 640 ATTTTTGGAATGGCGATT-TTTTC-CAAATCTGGTGTAC--GCAACGAAATGT-TGCCAT 694
Query 757 TCGTGAT-AGTCGTCACCGCA-ATCTTC-GTCCTCCTCTGCATA-TTTGTGATCCGTCCG 812
| | || || | ||| | || | ||| ||||| |||||| || |||||||||| ||
Sbjct 695 AC-TCATTAG-CATCAAC-CATAGCTTTTGTCCTTCTCTGC-TACTTTGTGATCCAACCT 750
Query 813 GGAATAGCATGGATCTTCTCCAAGACCGT-GAAGGCAGGTCACGTCGGAGACACCCACGT 871
||| | || ||||||||| ||| ||||| ||||| |||||| || |||||||| |||||
Sbjct 751 GGAGTGGCTTGGATCTTCAACAACACCGTCGAAGG-AGGTCAAGTGGGAGACACTCACGT 809
Query 872 TTGGTTCATTTTAGGAGGTGTGGTCCTATGCGGCCTGATCACAGACGCATGCGGGGTCCA 931
|||| || | | | || || | | ||| || | ||||| || | ||| ||||| ||
Sbjct 810 ATGGTACACTCTCGCTGGAGTCATTATTTGCAGCTTAATCACCGAAGTATGTGGGGTTCA 869
Query 932 CTCCATAACCGGGGCATTCCTGTTCGGTCTCTCCATTCCGCACGACCACATCATACGTAA 991
||| || ||||| |||||| |||||||||| || || || || ||||||||||| || ||
Sbjct 870 CTCAATTACCGGAGCATTCTTGTTCGGTCTATCGATCCCTCATGACCACATCATTCGAAA 929
Query 992 CATGATCGAGGAGAAGCTCCATGACTTCCTCTCCGGGA-TCCTTATGCCTCTCTTCTACA 1050
|||||||| ||||||||||| || |||||||| |||| | || |||||||| |||||||
Sbjct 930 AATGATCGAAGAGAAGCTCCACGATTTCCTCTC-GGGAATGCTAATGCCTCTTTTCTACA 988
Query 1051 TCATTTGTGGGTTACGAGCAGATATTGGTTTCATGCTCGACTACAC-TGA-CAAGTTC-A 1107
|||| || || ||| |||| |||||||||| |||| | | || | ||| | ||| |
Sbjct 989 TCATCTGCGGTTTAAGAGCTGATATTGGTTACATGAAC-AGGAC-CGTGAGC--GTTGGA 1044
Query 1108 -TGATGGTTGTAGTCATTTGCT-CTTCC-TTCTTAGTAAAGATCGTGACTACCG-TGGTC 1163
|||||| || || | || || | || || | || ||||| || | || | || |
Sbjct 1045 ATGATGGCGGTTGTGACTT-CTGCGTCGGTTATG-GTGAAGATTTTGTCAAC-GATGTTT 1101
Query 1164 ACCTCT-TTATTCATGCATATGCCTATGCGTGACGCATTCGCTATCGGAGCCCTTATGAA 1222
||| || ||| ||| ||| ||| ||||||| | || || || || || ||||||||
Sbjct 1102 TGCTCCATT-TTCTTGCGTATACCTTTGCGTGATGGTTTAGCCATTGGTGCACTTATGAA 1160
Query 1223 CACCAAGGGAACTTTATCGCTGGTCGTTCTTAATGCTGGTCGCGATACTAAGGCGCTGGA 1282
||||||||||| | | || ||| |||| |||||||| || || || ||||| ||||
Sbjct 1161 TACCAAGGGAACAATGGCACTAGTCATTCTCAATGCTGGACGAGACACCAAGGCATTGGA 1220
Query 1283 TAGTCCA--ATGTATACTCATATGACGATCGCGCTTCTAGTGATGTCACTAGTCGT-CGA 1339
|| | ||||| |||||| ||||| | ||| |||||||||||||| | || || | |
Sbjct 1221 C-GTT-ATTATGTACACTCATCTGACGTTGGCGTTTCTAGTGATGTCAATGGTGGTGC-A 1277
Query 1340 GCCTCT-TCTCGCGGTTGCATACAAGCCCAAGAAAAAACTTG-TTCAT-TACAAGTACCG 1396
||| || | | || |||| ||||| || ||||| || ||| || | || || ||||
Sbjct 1278 GCCACTAT-TAGCCATTGCTTACAAACCAAAGAAGAAG-TTGATTT-TCTATAAAAACCG 1334
Query 1397 TACGGTCCAAAAG-ATCAAAGGAGAAACAGAG-TTTCGCGTCTT-AGCTTGCGTCCATAT 1453
|| | ||||| | ||||||||| ||||| ||| | || || | | ||||||||| |
Sbjct 1335 AACCATTCAAAAACA-CAAAGGAGAGTCAGAGCTTT-GTGTATTGA-CATGCGTCCATGT 1391
Query 1454 ACTCCCCAATGTCTCTGGGATCACCAATCTCTTACAAGTCTCAAACCCAACCAA-ACAAT 1512
||||| || |||||||| || |||||||| |||||| |||| ||||| ||||| | |||
Sbjct 1392 CCTCCCTAACGTCTCTGGCATAACCAATCTATTACAACTCTCTAACCCGACCAAGA-AAT 1450
Query 1513 CACCTCTCAGCGTTTTCGCCATTCACCTCGTGGAGCTCACCGGTCGAACCACGGCCTCGC 1572
| ||||| | |||||| || || ||||| || ||||| || ||||| |||||||| |||
Sbjct 1451 CTCCTCTTAACGTTTTTGCTATCCACCTAGTCGAGCTAACGGGTCGCACCACGGCTTCGT 1510
Query 1573 TGCTAATCATGAACGACGAATGC-AAACCAAAAGCTAACTTCT-CGGACAGAGTCAGAGC 1630
|||| || |||||||| || || ||||| ||||||||||| | | ||| |||| |||||
Sbjct 1511 TGCTCATTATGAACGATGAG-GCCAAACCGAAAGCTAACTT-TGCTGACCGAGTTAGAGC 1568
Query 1631 AGAGTCCGACCAAATCGCTGAGACCTTCGA-AGCTATGGAAGTCAACAACGACGCAATGA 1689
|| || ||||| |||||||||| ||| | |||| | ||||| |||||||||| | |
Sbjct 1569 GGAATCTGACCAGATCGCTGAGATGTTC-ACAGCTCTCGAAGTGAACAACGACGGGGTAA 1627
Query 1690 CGGTTCAGACCATCACCGCAGTCTCTCCTTACGCAACCATGCACGAAGATATCTGCGCGT 1749
|||||||||||| ||||| || || ||||||||||| ||| |||||||||| || ||
Sbjct 1628 TGGTTCAGACCATTACCGCGGTTTCACCTTACGCAACGATGGACGAAGATATTTGTTTGT 1687
Query 1750 TAGCCGAGGACAAGCGAGTTTGTTTCATCATATTGCCTTACCACAA-ACACT-TGACACC 1807
| |||||||| || | || || ||||| |||||||||||||||| | | | |||| |
Sbjct 1688 TGGCCGAGGATAAACAAGCCTGCTTCATTTTATTGCCTTACCACAAGA-A-TATGACGTC 1745
Query 1808 GGACGGTCGGATGGGA-GAAGGAAACTCT-TCTCACGCTGAAATTAACCAAAACGTTTTG 1865
||||||||| | | ||||| ||| | | ||||||||||| |||||||||||| ||
Sbjct 1746 AGACGGTCGGTTAA-ATGAAGGTAACGCAGTG-CACGCTGAAATCAACCAAAACGTTATG 1803
Query 1866 AGCCACGCCCCTTGCTCGGTCGGGATTTTAGTGGACCGTGGTATGGCCA-TGGTCCGGTC 1924
|||||||| ||||| ||||| |||||||| || |||||||| ||| | | || ||||||
Sbjct 1804 AGCCACGCGCCTTGTTCGGTTGGGATTTTGGTTGACCGTGGCATGACGACTG-TCCGGTT 1862
Query 1925 TGAGTCGTTCCGTGGTG-AAG-C-AATG-A-AAAGA--GAAGTCGCAATGCTCTTCGTGG 1977
||| || || || | ||| | || | ||||| ||| |||| ||||| ||| | |
Sbjct 1863 TGAATCTTTTA-TGTTCCAAGGCGAAACCACAAAGAAAGAAATCGCCATGCTATTCCTAG 1921
Query 1978 GTGGTCCAGACGACCGCGAGGCGTTATCATACGCCTGGCGAATGGTCGGACAACACGTGA 2037
| |||| ||||||| | ||||| || | ||||| ||| | ||||| |||||| | ||
Sbjct 1922 GAGGTCGAGACGACAGAGAGGCTTTGGCTTACGCTTGGAGGATGGTGGGACAAGAAATGG 1981
Query 2038 TTAAACTCACTGTGGTAAGATTCGTCCCTGGAC-GCGAAGCTCTAATCTC-GTCCGGGAA 2095
|| ||||||| || || ||||||||||| | | | |||||| || |||| | ||||| |
Sbjct 1982 TTCAACTCACGGTCGTTAGATTCGTCCCAAGCCAG-GAAGCTTTAGTCTCAG-CCGGGGA 2039
Query 2096 AGTTGCAG-CGGAGTACGAGAGGGAGAAACAAGTCGACGATGAGTGCATCTACGAATTTA 2154
|| || | || ||||||||| ||| ||||| ||||| || |||| ||||||||| ||||
Sbjct 2040 AGCCGCGGACG-AGTACGAGAAGGATAAACATGTCGATGAAGAGTCCATCTACGAGTTTA 2098
Query 2155 ATTTCAAGACAATGAATGATTCTTCCGTTAAATATATCGAAAAAGTGGTCAACGA-TGGT 2213
| |||||||| ||||||||| | || || | ||| | || |||||||| || || |||
Sbjct 2099 ACTTCAAGACTATGAATGATCCATCAGTGACTTATGTAGAGAAAGTGGTTAA-GAATGGC 2157
Query 2214 CAAGACACGATCTCTA-CGATCAGAGAAATGGAAGACAACAATTCTTATGATCTTTACGT 2272
||||| |||||| | | |||| |||| ||||||| ||||||||||| ||||||||| |
Sbjct 2158 CAAGAAACGATCAC-AGCGATTTTAGAACTGGAAGATAACAATTCTTACGATCTTTACAT 2216
Query 2273 TGTCGGAAGAGGATAT-AACTCAGAAACTCCGGTGAC-TGCCGGTTTAA-ACGATTGGAG 2329
||| |||||||||||| || | |||||| || ||||| | | || || | | |||||||
Sbjct 2217 TGTGGGAAGAGGATATCAAGT-AGAAACACCTGTGACCT-CAGGGTTGACA-GATTGGAA 2273
Query 2330 CAGTAGTCCTGAGCTAGGCACAATAGGGGACACATTAGCTTCGTCGAATTTCACAATGCA 2389
|||| ||| || |||| | ||||| || |||||| ||| || || |||||||||||
Sbjct 2274 TAGTACTCCGGATTTAGGGATTATAGGCGATACATTAATTTCATCAAACTTCACAATGCA 2333
Query 2390 TGCTTCGGTA-TTAGTCATTCAACAATACTCTGCCACTAAAAGACAAGCTGCAG 2442
|||||||| || || | |||||||||||| | |||| |||||| | ||||
Sbjct 2334 AGCTTCGGTTCTT-GTGGTCCAACAATACTCTTCTGCTAACAGACAAACCGCAG 2386
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 131186555945
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5