BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg919313
Length=1327
Score E
Sequences producing significant alignments: (Bits) Value
AT1G06070.1 | Symbols: | Basic-leucine zipper (bZIP) transcrip... 2025 0.0
AT2G31370.3 | Symbols: | Basic-leucine zipper (bZIP) transcrip... 784 0.0
> AT1G06070.1 | Symbols: | Basic-leucine zipper (bZIP) transcription
factor family protein | chr1:1834829-1837648 REVERSE
LENGTH=1893
Length=1893
Score = 2025 bits (1096), Expect = 0.0
Identities = 1257/1332 (94%), Gaps = 22/1332 (2%)
Strand=Plus/Plus
Query 1 TGGGTTTAGGTCAAGTTCTGGATATGGATAAGGAGAAATCTCCTG---CACCACCTAGTG 57
||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||
Sbjct 227 TGGGTTTAGGTCAAGTTCTTGAAATGGATAAGGAGAAATCTCCTGCACCACCACCTAGTG 286
Query 58 GAGGTCTTCCTCCACCATCAGGTCGTTACTCTGCGTTTTCACCTAATGGAAGTAGCTTTG 117
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 287 GAGGTCTTCCTCCACCATCGGGTCGTTACTCTGCGTTTTCACCTAATGGAAGTAGCTTTG 346
Query 118 CAATGAAATCTGAATCATCGTTTCC-CCACTTGACTCCAAGTGGGAGCAGCAGCTCAGAT 176
|||||||| |||||||||| ||||| || |||||||||||||| |||| |||||||||
Sbjct 347 CAATGAAAGCTGAATCATCTTTTCCTCC-TTTGACTCCAAGTGGAAGCAATAGCTCAGAT 405
Query 177 GCTAACCGATTCAGCCACGATATAAGCCGAATGCCGGATAATCCACCTAAGAACCTAGGC 236
||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 406 GCTAACCGATTCAGCCATGATATTAGCCGAATGCCGGATAATCCACCTAAGAACCTAGGC 465
Query 237 CATCGCCGAGCTCATTCAGAGATTCTTACTCTTCCTGATGACTTGAGCTTTGATAGTGAT 296
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 466 CATCGCCGAGCTCATTCAGAGATTCTTACTCTTCCTGATGACTTAAGCTTTGATAGTGAT 525
Query 297 CTTGGTGTGGTTGGTGCTGCTGATGGACCTTCTTTTTCTGATGATACGGATGAGGACTTA 356
||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||
Sbjct 526 CTTGGTGTGGTTGGTGCTGCTGATGGACCTTCTTTCTCTGATGATACTGACGAGGACTTA 585
Query 357 CTGTATATGTATCTTGATATGGATAAATTCAATTCTTCTGCTACATCGACTTCTCAAATG 416
|| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 586 CTCTATATGTATCTTGATATGGAAAAATTCAATTCTTCTGCTACATCGACTTCTCAAATG 645
Query 417 GGTGAGCCATCAGAACCAG-CTTGGAGGAATGAATTAGGCTCGACTTCTAACCTTCAGAG 475
||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||
Sbjct 646 GGTGAGCCATCAGAACC-GACTTGGAGGAATGAATTAGCCTCGACTTCTAACCTTCAGAG 704
Query 476 TACGCCTGGTAGCTCTAATGAAAGACCGAGAATCAGGCACCAACACAGCCAATCGATGGA 535
||| || |||||||||| ||||||||||||||| || |||||||||||||||||||||||
Sbjct 705 TACACCCGGTAGCTCTAGTGAAAGACCGAGAATTAGACACCAACACAGCCAATCGATGGA 764
Query 536 TGGTTCGACAACTATCAAACCTGAGATGCTTATGTCAGGGAATGAAGATGTGTCTGGAGT 595
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 765 TGGTTCAACAACTATCAAGCCTGAGATGCTTATGTCAGGGAATGAAGATGTGTCTGGAGT 824
Query 596 TGACTCTAAGAAAGCCATCTCTGCTGCTAAACTTTCTGAGCTTGCTCTCATTGATCCTAA 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 825 TGACTCTAAGAAAGCCATCTCTGCTGCTAAACTTTCTGAGCTTGCTCTCATTGATCCAAA 884
Query 656 ACGTGCTAAGAGGATATGGGCAAACAGACAGTCTGCTGCGAGGTCAAAAGAAAGGAAGAT 715
||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 885 ACGCGCCAAGAGGATATGGGCAAACAGGCAGTCTGCTGCGAGGTCAAAAGAAAGGAAGAT 944
Query 716 GAGATATATTGCAGAGCTCGAGAGAAAAGTACAGACTTTACAAACAGAGGCCACATCTCT 775
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 945 GAGATACATTGCAGAGCTCGAGAGAAAAGTACAGACTTTACAAACAGAGGCCACATCTCT 1004
Query 776 CTCAGCCCAGTTGACTCTGTTACAGAGAGATACAAATGGCCTGAGTGTTGAAAACAATGA 835
|||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct 1005 CTCAGCCCAGTTGACTCTCTTACAGAGAGATACAAATGGCCTGGGTGTTGAAAACAATGA 1064
Query 836 GCTTAAACTGCGAGTACAAACTATGGAGCAACAGGTTCACCTACAGGACGCTTTAAATGA 895
|||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct 1065 GCTTAAACTGCGAGTACAAACTATGGAGCAACAGGTCCACCTACAGGATGCTTTAAATGA 1124
Query 896 TGCACTGAAGGAGGAAGTCCAGCATCTTAAGGTATTGACGGGGCAAGGTCCATCAAATGG 955
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1125 TGCACTAAAGGAGGAAGTCCAGCATCTTAAGGTATTGACGGGGCAAGGTCCATCAAATGG 1184
Query 956 TACATCAATGATGAACTACGGTTCTTTCGGATCAAACCAGCAATTTTATCCCAATAATCA 1015
||||||||||| | |||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct 1185 TACATCAATGA--A-CTACGGTTCTTTTGGATCAAACCAGCAATTCTATCCCAATAATCA 1241
Query 1016 GTCGATGCACACTATCTTAGCCgcacaacagttccagcagctccagatccagtcacagaa 1075
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1242 GTCGATGCACACTATCTTAGCCGCACAACAGTTACAGCAGCTCCAGATCCAGTCACAGAA 1301
Query 1076 acagcagcagcaacaacaacagcagcagcaacaacaacaccagcagcaacaacagcagca 1135
|||||| | |||||||||||||| || || |||||||| | ||||| ||||||
Sbjct 1302 ACAGCA--A-CAACAACAACAGCAACACCAGCAACAACA--A-CAGCA------GCAGCA 1349
Query 1136 gcagcaatttcagtttcagcagcagcaactgtatcagtttcagcagcagcagcGGCTTCA 1195
|||||||||||| ||||| |||||||||||||| ||| ||||||||||||| ||||||||
Sbjct 1350 GCAGCAATTTCACTTTCAACAGCAGCAACTGTACCAGCTTCAGCAGCAGCAACGGCTTCA 1409
Query 1196 ACAACAGGAACAACAAAGCGGGGCTTCAGAACTAAGAAGACCCATGCCTTCTCCAGGTCA 1255
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 1410 ACAACAGGAACAACAAAGCGGGGCTTCAGAGCTAAGAAGACCCATGCCTTCTCCTGGTCA 1469
Query 1256 GAAAGAGAGTGTGGCGTCGCCTGATCTTGAAGCTCCCTTGACAAAAGACTGAGTGTAGAC 1315
||||||||||||| | |||||||||| |||| |||||||||||||||||||||| |||||
Sbjct 1470 GAAAGAGAGTGTGACATCGCCTGATCGTGAAACTCCCTTGACAAAAGACTGAGTCTAGAC 1529
Query 1316 TGTGCTAATGTC 1327
||||||||||||
Sbjct 1530 TGTGCTAATGTC 1541
> AT2G31370.3 | Symbols: | Basic-leucine zipper (bZIP) transcription
factor family protein | chr2:13379037-13381485 FORWARD
LENGTH=1740
Length=1740
Score = 784 bits (424), Expect = 0.0
Identities = 874/1081 (81%), Gaps = 72/1081 (7%)
Strand=Plus/Plus
Query 171 TCAGATGCTAACCGATTCAGCCACGATATAAGCCGAATGCCGGATAATCCACCTAAGAAC 230
||||||||||| ||| | || || ||||| ||||| |||| ||||| |||||||||||
Sbjct 352 TCAGATGCTAATCGAATGAGTCATGATATTAGCCGTATGCTTGATAACCCACCTAAGAAG 411
Query 231 CTAGGCCATCGCCGAGCTCATTCAGAGATTCTTACTCTTCCTGATGACTTGAGCTTTGAT 290
| || ||||| ||||||||||| || || |||||||| |||||||| ||||||||||||
Sbjct 412 ATTGGACATCGGCGAGCTCATTCTGAAATACTTACTCTCCCTGATGATTTGAGCTTTGAT 471
Query 291 AGTGATCTTGGTGTGGTTGG---TGCTGCTGATGGACCTTCTTTTTCTGATGATACGGAT 347
|||||||||||||||||||| ||||||||||||| ||||||| |||||||| || ||
Sbjct 472 AGTGATCTTGGTGTGGTTGGTAATGCTGCTGATGGAGCTTCTTTCTCTGATGAGACTGAA 531
Query 348 GAGGACTTACTGTATATGTATCTTGATATGGATAAATTCAATTCTTCTGCTACATCGACT 407
|| || || || | ||||||||||||||||||||| || ||||||||||||||||| ||
Sbjct 532 GAAGATTTGCTCTCTATGTATCTTGATATGGATAAGTTTAATTCTTCTGCTACATCTTCT 591
Query 408 TCTCAAATGGGTGAGCCATCA-GAACCAGCTTGG----A-G-G---A--AT---GA-A-- 449
| ||| | |||||||||||| ||| | |||||| | | | | || || |
Sbjct 592 GCCCAAGTTGGTGAGCCATCAGGAA-CTGCTTGGAAAAATGAGACAATGATGCAGACAGG 650
Query 450 -TTAGGCTCGACTTCTAA-CCTTCAGAGTACGCCTGGTAGCTC-TAATGAAAGACCGAGA 506
|||||| ||||| || || ||||| |||| | ||| || | ||||| || |||
Sbjct 651 CACAGGCTCAACTTCCAATCC-TCAGAATACGGTTAATAG-TCTTGGCGAAAGGCCAAGA 708
Query 507 ATCAGGCACCAACACAGCCAATCGATGGATGGTTCGA-CAACTATCAAACCTGAGATGCT 565
|||||||| ||||| |||||||| ||||||||||| | || |||| || |||||||||
Sbjct 709 ATCAGGCATCAACATAGCCAATCTATGGATGGTTCAATGAA-TATC-AA--TGAGATGCT 764
Query 566 TATGTCAGGG-AATGAAGATG-TGTCTG-GAGTTGACT-CTAAGAAAG-CCATCTCTGCT 620
|||||| ||| |||||||||| | |||| | |||| | ||||| ||| | || ||||||
Sbjct 765 TATGTC-GGGAAATGAAGATGAT-TCTGCTA-TTGA-TGCTAAG-AAGTCTATGTCTGCT 819
Query 621 GCTAAACTTTCTGAGCTTGCTCTCATTGATCCTAAACGTGCTAAGAGGATATGGGCAAAC 680
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 820 ACTAAACTTGCTGAGCTTGCTCTCATTGATCCTAAACGTGCTAAGAGGATATGGGCAAAC 879
Query 681 AGACAGTCTGCTGCGAGG-TCAAAAGAAAGGAAGATGAGATA--TATTGCAGAGCTCGAG 737
|| ||||| || || | | |||||||||||||||| |||||| |||| ||||| |||
Sbjct 880 AGGCAGTCCGCAGC-ACGATCAAAAGAAAGGAAGACGAGATACATATTT--GAGCTTGAG 936
Query 738 AGAAAAGTACAGACTTTACAAACAGAGGCCACATCTCTCTCAGCCCAGTTGACTCTGTTA 797
||||||||||||||||| ||||||||||| ||| ||||||||||||||||||| || |||
Sbjct 937 AGAAAAGTACAGACTTTGCAAACAGAGGCTACAACTCTCTCAGCCCAGTTGACCCTCTTA 996
Query 798 CAGAGAGATACAAATGGCCTGAGTGTTGAAAACAATGAGCTTAAACTGCGAGT-ACAAAC 856
|||||||| ||||||||| ||| |||||||||||||||||| || ||||| || ||||||
Sbjct 997 CAGAGAGACACAAATGGCTTGACTGTTGAAAACAATGAGCTGAAGCTGCG-GTTACAAAC 1055
Query 857 TATGGAGCAACAGGTTCACCTACAGGACGCTTTAAATGATGCACTGAAGGAGGAAGTCCA 916
|||||||| ||||||||| | ||||| | |||| || ||||| ||||||||| ||||
Sbjct 1056 AATGGAGCAGCAGGTTCACTTGCAGGATGAACTAAACGAAGCACTAAAGGAGGAAATCCA 1115
Query 917 GCATCTTAAGGTATTGACGGGGCAAGGTCCATCAAATGGTACATCAATGATGAACTACGG 976
|||||| ||||| ||||| || |||| | | || | | || | | ||||||| ||
Sbjct 1116 GCATCTGAAGGTGTTGACTGGCCAAGTTGC-TCCA-T----CAGCG-T--TGAACTATGG 1166
Query 977 TTC-TTTCGGATCAAACCAGCA--ATTT-TATCCCAATAATCAGTCGATGCACACTATCT 1032
|| ||| |||||||||||||| | || ||| |||| |||||||| ||||| || ||||
Sbjct 1167 GTCGTTT-GGATCAAACCAGCAGCAATTCTATTCCAACAATCAGTCAATGCAAACAATCT 1225
Query 1033 TAGCCgcacaacagttccagcagctccagatccagtcacagaaacagcagcagcaacaac 1092
|||| ||| ||||||||||||| || ||||| || |||||||| ||||| || |||||||
Sbjct 1226 TAGCTGCAAAACAGTTCCAGCAACTTCAGATTCATTCACAGAAGCAGCAACAACAACAAC 1285
Query 1093 aacagcagcagcaacaacaacaccagcagcaacaacagcagcagcagcaatttcagtttc 1152
|||| || | ||||| |||||||| ||||| || ||||| ||||| || | ||||||||
Sbjct 1286 AACAACA--A-CAACAGCAACACCAACAGCAGCAGCAGCAACAGCAACAGTATCAGTTTC 1342
Query 1153 agcagcagca-actgtatcagtttcagcagcagcagcGGCTTCAACAACAGGAACAACAA 1211
| ||||| || | || | ||| || | |||||||||||||||||| || |||||||||
Sbjct 1343 AACAGCAACAGA-TGCAACAGCTT-AT--GCAGCAGCGGCTTCAACAGCAAGAACAACAA 1398
Query 1212 A 1212
|
Sbjct 1399 A 1399
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 65310909045
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5