BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg919346
Length=2068
Score E
Sequences producing significant alignments: (Bits) Value
AT1G06310.1 | Symbols: ACX6 | acyl-CoA oxidase 6 | chr1:1926791... 3186 0.0
AT1G06290.1 | Symbols: ACX3, ATACX3 | acyl-CoA oxidase 3 | chr1... 2510 0.0
AT3G06690.1 | Symbols: | acyl-CoA oxidases;oxidoreductases, ac... 640 0.0
> AT1G06310.1 | Symbols: ACX6 | acyl-CoA oxidase 6 | chr1:1926791-1930258
FORWARD LENGTH=2070
Length=2070
Score = 3186 bits (1725), Expect = 0.0
Identities = 1948/2057 (95%), Gaps = 10/2057 (0%)
Strand=Plus/Plus
Query 19 AAATGTCGGAATATCG-TGGACTCCGGCGAGCCCACATTCTCGCCAATCACATACTCCGA 77
||||||| ||| || | || ||||||||||||||| |||||||| ||||||||||||||
Sbjct 10 AAATGTCCGAAAAT-GTTGAACTCCGGCGAGCCCATATTCTCGCTAATCACATACTCCGT 68
Query 78 TCACCTCCTCCGTCCTCGAACCTCTCCCTCACGCCGGAAGTATGTTTGCAGTACTCTCCG 137
||||||| || || || |||| |||||||||||||||||||||||| |||||||||||
Sbjct 69 TCACCTCGGCCTTCTTCAAACCCCTCCCTCACGCCGGAAGTATGTTTTCAGTACTCTCCA 128
Query 138 CCGGAGCTCAACGAGAGCTATGGATTCGATGTCAAGGAGATGAGGAAATTACTCGACGGA 197
||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||
Sbjct 129 CCGGAGCTCAACGAGAGCTATGGATTCGAAGTCAAGGAGATGAGAAAACTACTCGACGGA 188
Query 198 CACAACTTGGAGGACAGAGACTGGTTTTATGGGCTCATGATGCAGAGTAATCTGTTTAAC 257
|||||||| ||||| ||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct 189 CACAACTTAGAGGAAAGAGACTGGCTTTATGGGCTCATGATGCAGAGCAATCTGTTTAAC 248
Query 258 CGGAAAGAGAGAGGAGGTAAGGTTTTCGTCTCGCCGGATTACAATCAGACGATGGAGCAA 317
| |||| ||||||||||| || ||||||||||||| ||||||||||| || |||||||||
Sbjct 249 CCGAAACAGAGAGGAGGTCAGATTTTCGTCTCGCCCGATTACAATCAAACAATGGAGCAA 308
Query 318 CAGCGCCATATTAGCATGAAGCGGATCTTGTACTTGCTCGAAAATGGGGTCTTTCAAGGA 377
|||||||| || || |||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 309 CAGCGCCAGATCAGTATGAAGCGGATCTTTTACTTGCTCGAAAAAGGGGTCTTTCAAGGA 368
Query 378 TGGTTGACGGAGACAGGTCCTGAGGCTGAGCTCAACAAGTTTGCTCTCTACGAAGTTTGC 437
||| | ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 369 TGGCTAACGGAGACAGGTCCTGAAGCTGAGCTCAAGAAGTTTGCTCTCTACGAAGTTTGC 428
Query 438 GGGATTTATGATTACTCTCTCTCTGCCAAACTCGGTGTTCATTTCTTGTTGTGGGGTAAT 497
||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||
Sbjct 429 GGGATTTATGATTACTCCCTCTCCGCCAAACTCGGTGTTCACTTCTTGTTGTGGGGTAAT 488
Query 498 GCTGTTAAGTTCTTTGGGACAGAGCGTCACCATGAAAAGTGGCTGAAAGACACCGAAGAT 557
||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct 489 GCTGTTAAGTTCTTTGGGACAAAGCGTCACCATGAAAAGTGGCTGAAAGACACTGAAGAT 548
Query 558 TATCTTGTCAAGGGCTGCTTTGCTATGACTGAGCTAGGCCATGGAACCAATGTTCGGGGA 617
||| ||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||
Sbjct 549 TATGTTGTCAAGGGCTGCTTTGCAATGACTGAGCTAGGCCATGGAACTAATGTACGGGGA 608
Query 618 ATTGAAACAGTGACTACTTATGACACAAGAACTGAAGAGTTTGTGATAAATACTCCTTGT 677
|||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct 609 ATTGAAACAGTGACTACTTATGACCCAACAACTGAAGAGTTTGTGATAAATACTCCTTGT 668
Query 678 GAATCTGCTCAGAAGTATTGGATCGGTGAGGCAGCTAACCATGCAAACCATGCAATTGTG 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 669 GAATCTGCTCAGAAGTATTGGATCGGTGAGGCAGCTAACCATGCAAACCATGCAATTGTG 728
Query 738 ATTTCACAGCTTAGTATAAACGGAACCAACCAGGGGGTTCATGTCTTTATTGCTCAAATC 797
||||| ||||||||||| || || |||||||||||| |||||||||||||||||||||||
Sbjct 729 ATTTCTCAGCTTAGTATGAATGGGACCAACCAGGGGATTCATGTCTTTATTGCTCAAATC 788
Query 798 AGAGATCAAGATGGTAACATATGTCCTAACGTCCGCATAGCCGACTGTGGACACAAAATT 857
|||||||| ||||| |||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct 789 AGAGATCATGATGGCAACACATGTCCTAACGTCCGCATAGCTGACTGTGGACACAAAATT 848
Query 858 GGTTTGAATGGTGTTGACAATGGCCGAATATGGTTTGACAATCTTCGAATTCCTAGAGAG 917
|||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct 849 GGTTTGAATGGTGTTGACAATGGCCGTATATGGTTTGACAATCTTCGAATTCCAAGAGAG 908
Query 918 AATTTATTGAACTCAGTTGCTGATGTTTTATCTGATGGGAAGTATGTTAGCTCAATTAAA 977
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 909 AATTTATTGAACTCAGTTGCTGATGTTTTAGCTGATGGGAAGTATGTTAGCTCAATTAAA 968
Query 978 GATCCTGATCAGAGATTTGGAGCATTCTTGGCCCCTTTGACCTCAGGGCGTGTCACAATT 1037
||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct 969 GATCCTGATCAGAGATTTGGAGCATTCTTGGCCCCTTTGACATCTGGTCGTGTCACAATT 1028
Query 1038 GCTTCAAGTGCAATTTATTCTGCAAAGCTCGGATTAGCTGTTGCTATAAGATACTCACTA 1097
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1029 GCTTCAAGTGCAATTTATTCTGCAAAGCTCGGATTAGCTGTTGCTATTAGATACTCACTA 1088
Query 1098 TCGAGAAGAGCCTTCTCGGTTGCAGCCAATAGTCCTGAAATTCTCCTTCTTGATTATCCA 1157
||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||
Sbjct 1089 TCGAGAAGAGCCTTCTCAGTTGCAGCCAATGGTCCTGAAGTTCTCCTTCTTGATTATCCA 1148
Query 1158 AGCCATCAAAGACGACTTTTACCGCTCCTAGCAAAGACATATGCTATGAGTCTTGCTGTA 1217
||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||
Sbjct 1149 AGCCATCAAAGACGACTTTTACCACTCCTAGCAAAGACATATGCTATGAGTTTTGCTGTA 1208
Query 1218 AATGACTTGAAGATGATTTATGTGAAGAGGACACCTGAGTCTAACAAAGCCATCCATGTC 1277
|||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||
Sbjct 1209 AATGACTTGAAGATGATTTACGTGAAGAGGACACCTGAGACCAACAAAGCCATCCATGTC 1268
Query 1278 GTTTCAAGTGGGTTCAAAGCTGTTCTCACTTGGCACAATATGCGAACACTTCAGGAATGT 1337
||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1269 GTTTCAAGTGGATTCAAAGCTGTTCTCACTTGGCACAATATGCGAACGCTTCAGGAATGT 1328
Query 1338 CGTGAAGCTGTTGGTGGGCAAGGTTTGAAAACAGAAAACCGAGTTGGTCATCTAAAAGGC 1397
|||||||||||||| || |||||||||||||||||||||||||| |||||| |||||||
Sbjct 1329 CGTGAAGCTGTTGGAGGCCAAGGTTTGAAAACAGAAAACCGAGTAGGTCATTTAAAAGGA 1388
Query 1398 GAATATGATGTGCAGACTACATTTGAGGGTGACAATAATGTACTTATGCAGCTGGTGAGC 1457
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1389 GAATATGATGTGCAGACTACATTTGAGGGTGACAATAATGTACTCATGCAGCTGGTGAGC 1448
Query 1458 AAGGCACTTTTTGCTGAATATGTATCGTGTAAGAAGAGAAATAAACCTTTCAAAGGATTA 1517
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1449 AAGGCACTTTTTGCTGAATATGTATCGTGTAAGAAGAGAAATAAACCTTTCAAAGGATTG 1508
Query 1518 GGATTGGAGCACATGAACAGTCCACGTCCTGTATTGCCGACTCAACTCACATCATCTACC 1577
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1509 GGATTGGAGCACATGAACAGTCCACGTCCTGTATTGCCGACTCAACTCACATCATCTACA 1568
Query 1578 CTCAGATGCAGCCAGTTCCAGGAAAA-TGTGTTTTGCTTAAGAGAGCGAGATCTTCTGGA 1636
|| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||
Sbjct 1569 CTAAGATGCAGCCAGTTCCA-GAAAAGTGTGTTTTGCTTAAGAGAGCGAGATCTTCTAGA 1627
Query 1637 ACGGTTTACTTCTGAAGTTGCAGAGCTTCAAGGGAGAGGAGAAAGCAGAGAGTTCTCCA- 1695
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1628 ACGGTTTACTTCTGAAGTTGCAGAGCTTCAAGGGAGAGGAGAAAGCAGAGAGTTCT-TAT 1686
Query 1696 TCCTTTTGAATCATCAACTTTCTGAAGACTTAAGTAAAGCTTTCACAGAAAAAGCAATAC 1755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1687 TCCTTTTGAATCATCAACTTTCTGAAGACTTAAGTAAAGCTTTCACAGAAAAAGCAATAC 1746
Query 1756 TGCAAACCGTTTTGGATGCTGAGGCCAAATTGCCTCCTGGCTCAGTTAAGGAAGTGTTGG 1815
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1747 TGCAAACCGTTTTGGATGCTGAGGCCAAATTGCCTCCTGGCTCAGTTAAGGATGTGTTGG 1806
Query 1816 GTCTTGTAAGATCAATGTATGCATTGATCAGCTTGGAAGAAGATCCATCACTGCTAAGAT 1875
||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct 1807 GTCTTGTAAGATCAATGTACGCATTGATCAGCTTGGAAGAAGATCCATCGCTGCTAAGAT 1866
Query 1876 ATGGTCACCTCTCAAGGGATAATGTTGGAGATGTGAGGAGAGAAGTAGGTAAGCTCTGTG 1935
||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct 1867 ATGGTCACCTCTCAAGGGATAATGTTGGAGATGTGAGGAAAGAAGTTTCAAAGCTCTGTG 1926
Query 1936 GAGAGCTTAGACCTCACGCGCTTGCACTTGTGGCTTCATTCGGGATTCCAGATGCGTTCT 1995
||||||||||||||||||| |||||||| ||||||||||||||||||||||| || ||||
Sbjct 1927 GAGAGCTTAGACCTCACGCACTTGCACTCGTGGCTTCATTCGGGATTCCAGACGCCTTCT 1986
Query 1996 TGAGTCCAATTGCATTCAACTGGGTCAAAGCTAACGCTTGGTCTTCACTTTAGTTACT-- 2053
|||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct 1987 TGAGTCCAATTGCATTCAACTGGGTCGAAGCCAACGCTTGGTCTTCACTTTAGTTACTTG 2046
Query 2054 --AGTAATAATCTCTTC 2068
|||||||||||||||
Sbjct 2047 CTAGTAATAATCTCTTC 2063
> AT1G06290.1 | Symbols: ACX3, ATACX3 | acyl-CoA oxidase 3 | chr1:1922352-1926278
FORWARD LENGTH=2375
Length=2375
Score = 2510 bits (1359), Expect = 0.0
Identities = 1843/2074 (89%), Gaps = 44/2074 (2%)
Strand=Plus/Plus
Query 19 AAATGTCGGAAT-ATCGTGGACTCCGGCGAGCCCACATTCTCGCCAATCACATACTCCGA 77
||||||||| || |||||| |||||| ||||| || ||||||||||||||||||||| |
Sbjct 70 AAATGTCGG-ATAATCGTGCACTCCGACGAGCTCATGTTCTCGCCAATCACATACTCCAA 128
Query 78 TCACCTCCTCCGTCCTCGAACCTC-TCCCTCACGCCG-GAAG-TATGTTTGCAGTACTCT 134
||| |||||| || ||||||| | ||||| || || | || |||||||||||||||||
Sbjct 129 TCAAATCCTCCATCTTCGAACC-CGTCCCTGTCG-CGCG-AGTTATGTTTGCAGTACTCT 185
Query 135 CCGCCGGAGCTCAACGAGAGCTATGGATTCGATGTCAAGGAGATGAGGAAATTACTCGAC 194
|| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct 186 CCACCGGAGCTCAACGAGAGCTATGGATTCGATGTCAAGGAGATGAGAAAATTACTTGAC 245
Query 195 GGACACAACTTGGAGGA-CAGAGACTGGTTTTATGGGCTCATGATGCAGAGTAATCTGTT 253
||||||||| ||| ||| | | |||||| ||||||| |||||||||||||| ||||||||
Sbjct 246 GGACACAACGTGGTGGATC-GGGACTGGATTTATGGACTCATGATGCAGAGCAATCTGTT 304
Query 254 TAACCGGAAAGAGAGAGGAGGTAAGGTTTTCGTCTCGCCGGATTACAATCAGACGATGGA 313
||| ||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct 305 TAATCGGAAGGAGAGAGGAGGTAAGATTTTCGTGTCGCCGGATTACAATCAGACGATGGA 364
Query 314 GCAACAGCGCCATATTAGC-ATGAAGCGGATCTTGTACTTGCTCGAAAATGGGGTCTTTC 372
||| ||||| | || | | ||||| ||||||| ||||||||| || |||||||| ||||
Sbjct 365 GCAGCAGCGTGAGATCA-CAATGAAACGGATCTGGTACTTGCTTGAGAATGGGGT-TTTC 422
Query 373 -AAGGATGGTTGACGGAGACAGGTCCTGAGGCTGAGCTCAACAAGTTTGCTCT-CTACGA 430
||||||||||||||||||||||||||||||| ||||||| || || ||||| || ||
Sbjct 423 AAAGGATGGTTGACGGAGACAGGTCCTGAGGCCGAGCTCAGGAAATTAGCTCTGCT-TGA 481
Query 431 AGTTTGCGGGATTTATGATTACTCTC-TCTCTGCCAAACTCGGTGTTCATTTCTTGTTGT 489
|||||||||||||||||| |||| | |||| |||| | ||||| |||||||| |||
Sbjct 482 GGTTTGCGGGATTTATGATCACTC-CGTCTCCATCAAAGTTGGTGTGCATTTCTTCCTGT 540
Query 490 GGGGTAATGCTGTTAAGTTCTTTGGGACAGAGCGTCACCATGAAAAGTGGCTGAAAG-AC 548
||||||||||||| ||||| ||||| ||| ||||||||||||||||||||||| ||| ||
Sbjct 541 GGGGTAATGCTGTAAAGTTTTTTGGAACAAAGCGTCACCATGAAAAGTGGCTG-AAGAAC 599
Query 549 ACCGAAGATTATCTTGTCAAGGGCTGCTTTGCTATGACTGAGCTAGGCCATGGAACCAAT 608
|||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||
Sbjct 600 ACCGAAGATTATGTTGTCAAGGGCTGTTTTGCTATGACTGAGCTAGGCCATGGAAGTAAT 659
Query 609 GTTCGGGGAATTGAAACAGTGACTACTTATGACACAAGAACTGAAGAGTTTGTGATAAAT 668
|| |||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||
Sbjct 660 GTACGGGGAATTGAAACAGTGACAACTTATGACCCAAAAACTGAAGAGTTTGTGATAAAT 719
Query 669 ACTCCTTGTGAATCTGCTCAGAAGTATTGGATCGGTGAGGCAGCTAACCATGCAAACCAT 728
|||||||||||||||||||||||||||||||| |||| ||||||||| ||||||| |||
Sbjct 720 ACTCCTTGTGAATCTGCTCAGAAGTATTGGATTGGTGGGGCAGCTAATCATGCAACCCAC 779
Query 729 GCAATTGTGATTTCACAGCTT-AGTATAAACGGAACCAACCAGGGGGTTCATGTCTTTAT 787
|||||||| ||||||||||| | ||| |||||||||||||||||||| |||| ||||||
Sbjct 780 ACAATTGTGTTTTCACAGCTTCA-TATCAACGGAACCAACCAGGGGGTCCATGCCTTTAT 838
Query 788 TGCTCAAATCAGAGATCAAGATGGTAACATATGTCCTAACGTCCGCATAGCCGACTGTGG 847
|| |||||||| ||||||||||| | ||||||||| || ||||||| || ||||||||
Sbjct 839 CGCCCAAATCAGGGATCAAGATGGCAGCATATGTCCAAATATCCGCATTGCTGACTGTGG 898
Query 848 ACACAAAATTGGTTTGAATGGTGTTGACAATGGCCGAATATGGTTTGACAATCTTCGAAT 907
||||||||||||| | |||||||||||||||||||| || |||||||| |||||||||||
Sbjct 899 ACACAAAATTGGTCTAAATGGTGTTGACAATGGCCGGATCTGGTTTGATAATCTTCGAAT 958
Query 908 TCCTAGAGAGAATTTATTGAACT-CAGTTGCTGATGTTTTATCTGATGGGAAGTATGTTA 966
||| ||||||||||| ||||| | ||||||||||||||| |||||||||||||||||||
Sbjct 959 TCCAAGAGAGAATTTGTTGAA-TGCAGTTGCTGATGTTTCGTCTGATGGGAAGTATGTTA 1017
Query 967 GCTCAATTAAAGATCCTGATCAGAGATTTGGAGCATTCTTGGCCCCTTTGACCTCAGGGC 1026
|||||||||||||||||||||||||||||||||||||| ||||||||||||| || || |
Sbjct 1018 GCTCAATTAAAGATCCTGATCAGAGATTTGGAGCATTCATGGCCCCTTTGACTTCTGGCC 1077
Query 1027 GTGTCACAATTGCTTCAAGTGCAATTTATTCTGCAAAGCTCGGATTAGCTGTTGCTATAA 1086
| ||||||||||| |||||||||||||||||||||||| |||||||| || |||||||||
Sbjct 1078 GAGTCACAATTGCATCAAGTGCAATTTATTCTGCAAAGGTCGGATTATCTATTGCTATAA 1137
Query 1087 GATACTCACTATCGAGAAGAGCCTTCTCGGTTGCAGCCAATAGTCCTGAAATTCTCCTTC 1146
| |||||| ||||||||||||||||||| ||| |||| ||| |||||||| | ||||| |
Sbjct 1138 GGTACTCATTATCGAGAAGAGCCTTCTCTGTTACAGCTAATGGTCCTGAAGTCCTCCTCC 1197
Query 1147 TTGATTATCCAAGCCATCAAAGACGACTTTTACCGCTCCTAGCAAAGACATATGCTATGA 1206
||||||| |||||||||||||| ||||| |||| |||||||||||||||||||||||||
Sbjct 1198 TTGATTACCCAAGCCATCAAAGGCGACTGCTACCACTCCTAGCAAAGACATATGCTATGA 1257
Query 1207 GTCTTGCTGTAAATGACTTGAAGATGATTTATGTGAAGAGGACACCTGAGTCTAACAAAG 1266
|| |||||| |||||| |||||||||||||| |||||||| ||||| ||| | |||||||
Sbjct 1258 GTTTTGCTGCAAATGAATTGAAGATGATTTACGTGAAGAGAACACCGGAGACCAACAAAG 1317
Query 1267 CCATCCATGTCGTTTCAAGTGGGTTCAAAGCTGTTCTCACTTGGCACAATATGCGA-ACA 1325
||||||| || ||||||||||||||||||||||||||||| ||||||||||||| | |||
Sbjct 1318 CCATCCACGTTGTTTCAAGTGGGTTCAAAGCTGTTCTCACCTGGCACAATATGC-ACACA 1376
Query 1326 CTTCAGGAATGTCGTGAAGCTGTTGGTGGGCAAGGTTTGAAAACAGAAAACCGAGTTGGT 1385
|||||||||||||| |||||||| || ||||||||| ||||||||||||| | |||||||
Sbjct 1377 CTTCAGGAATGTCGAGAAGCTGTCGGAGGGCAAGGTGTGAAAACAGAAAATCTAGTTGGT 1436
Query 1386 CA-TCTAAAAGGCGAATATGATGTGCAGACTACATTTGAGGGTGACAATAATGTACTT-A 1443
|| | | ||||| |||| ||||||||||||||||||||||||||||||||||||| || |
Sbjct 1437 CAGT-TGAAAGGTGAATTTGATGTGCAGACTACATTTGAGGGTGACAATAATGTA-TTGA 1494
Query 1444 TGCAGCTGGTGAGCAAGGCACTTTTTGCTGAATATGTATCGTGTAAGAAGAGAAATAAAC 1503
|||||| |||||||||||| ||||| ||||||||||||||||||||||||||||| ||||
Sbjct 1495 TGCAGCAGGTGAGCAAGGCGCTTTTCGCTGAATATGTATCGTGTAAGAAGAGAAACAAAC 1554
Query 1504 CTTTCAAAGGATTAGGATTGGAGCACATGAACAGTCCACGTCCTGTATTGCCGACTCAAC 1563
||||||| ||| | ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1555 CTTTCAAGGGACTGGGATTGGAGCACATGAACAGTCCACGTCCTGTATTACCGACTCAAC 1614
Query 1564 TCACATCATCTACCCTCAGATGCAGCCAGTTCCAGGA-AAATGTGTTTTGCTTAAGAGAG 1622
|||||||||| ||||||||||||||||| |||||| | ||||||||| ||||||||||||
Sbjct 1615 TCACATCATCAACCCTCAGATGCAGCCAATTCCAG-ACAAATGTGTTCTGCTTAAGAGAG 1673
Query 1623 CGAGATCTTCTGGAACGGTTTACTTCTGAAGTTGCAGAGCTTCAAGGGAGAGGAGAAAG- 1681
|||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||
Sbjct 1674 CGAGATCTTCTGGAGCAATTTACTTCTGAAGTTGCACAGCTTCAAGGGAGAGGAGAAAGT 1733
Query 1682 CAGAGAGTTCTCCATCCTTTTGAATCATCAACTTTCTGAAGACTTAAGTAAAGCTTTCAC 1741
| |||| ||||| |||| ||| |||||||||| ||||||||||| |||||||||||||
Sbjct 1734 C-GAGAATTCTCTTTCCTCCTGAGTCATCAACTTGCTGAAGACTTAGGTAAAGCTTTCAC 1792
Query 1742 AGAAAAAGCAATACTGCAAACCGTTTTGGATGCTGAGGCCAAATTGCCTCCTGGCTCAGT 1801
||| ||||||||||| |||||| |||||||||||||||| ||| | ||| ||||||||||
Sbjct 1793 AGAGAAAGCAATACTTCAAACCATTTTGGATGCTGAGGCAAAACTACCTACTGGCTCAGT 1852
Query 1802 TAAGGAAGTGTTGGGTCTTGTAAGATCAATGTATGCATTGATCAGCTTGGAAGAAGATCC 1861
||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1853 AAAGGATGTGTTGGGTCTTGTAAGATCAATGTACGCATTGATCAGCTTGGAAGAAGATCC 1912
Query 1862 ATCACTGCTAAGATATGGTCACCT--CTCAAGGGATAATGTTGGAGATGTGAGGAGAGAA 1919
||| |||| |||||||| |||| |||| || ||||||||||||||||||||||||||
Sbjct 1913 ATCGTTGCTGCGATATGGTTACCTATCTCA-GG-ATAATGTTGGAGATGTGAGGAGAGAA 1970
Query 1920 GTAGGTAAGCTCTGTGGAGAGCTTAGACCTCACGCGCTTGCACTTGTGGCTTCATTCGGG 1979
|| ||||||||||||||||||||||| |||||||||||||| || ||||||||||
Sbjct 1971 GTTTCAAAGCTCTGTGGAGAGCTTAGACCACACGCGCTTGCACTCGTCACTTCATTCGGC 2030
Query 1980 ATTCCAGA-TGCGTTCTTGAGTCCAATTGCATTCAACTGGGTCAAAGCTAACGCTTGGTC 2038
|||||||| | | |||||||||||||||||||||||||||||| |||| || ||||||||
Sbjct 2031 ATTCCAGACTCC-TTCTTGAGTCCAATTGCATTCAACTGGGTCGAAGCCAATGCTTGGTC 2089
Query 2039 TTCACTTTAGTTAC-T---AGTAATAATCTCTTC 2068
|||| ||||||||| | ||||| |||||||||
Sbjct 2090 TTCAGTTTAGTTACCTGCTAGTAACAATCTCTTC 2123
> AT3G06690.1 | Symbols: | acyl-CoA oxidases;oxidoreductases,
acting on the CH-CH group of donors;FAD binding;oxidoreductases;acyl-CoA
oxidases | chr3:2115426-2116825 REVERSE LENGTH=727
Length=727
Score = 640 bits (346), Expect = 0.0
Identities = 479/542 (88%), Gaps = 14/542 (3%)
Strand=Plus/Plus
Query 1536 AGTCCACGTCCTGTATTGCCGACTCAACTCACATCATCTACCCTCAGATGCAGCCAGTTC 1595
||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||
Sbjct 52 AGTCCACGTCCTGTATTACCGACTCAACTCACATCATCAACCCTCAGATGCAGCCAATTC 111
Query 1596 CAGGA-AAATGTGTTTTGCTTAAGAGAGCGAGATCTTCTGGAACGGTTTACTTCTGAAGT 1654
|| || ||||||||| ||||||||||||||||||||||| || || ||||||||||||||
Sbjct 112 CA-GACAAATGTGTTCTGCTTAAGAGAGCGAGATCTTCTAGAGCGATTTACTTCTGAAGT 170
Query 1655 TGCAGAGCTTCAAGGGAGAGGAGAAAG-CAGAGAGTTCTCCATCCTTTTGAATCATCAAC 1713
|||| |||||||||||||||||||||| | |||| ||||| |||| ||| ||||||||
Sbjct 171 TGCACAGCTTCAAGGGAGAGGAGAAAGTC-GAGAATTCTCTTTCCTCCTGAGTCATCAAC 229
Query 1714 TTTCTGAAGACTTAAGTAAAGCTTTCACAGAAAAAGCAATACTGCAAACCGTTTTGGATG 1773
|| ||||||||||| |||||||||||||||| |||||||| || |||||| |||||||||
Sbjct 230 TTGCTGAAGACTTAGGTAAAGCTTTCACAGAGAAAGCAATGCTTCAAACCATTTTGGATG 289
Query 1774 CTGAGGCCAAATTGCCTCCTGGCTCAGTTAAGGAAGTGTTGGGTCTTGTAAGATCAATGT 1833
||||||| ||| | ||| |||||||||| ||||| |||||||||||||||||||||||||
Sbjct 290 CTGAGGCAAAACTACCTACTGGCTCAGTAAAGGATGTGTTGGGTCTTGTAAGATCAATGT 349
Query 1834 ATGCATTGATCAGCTTGGAAGAAGATCCATCACTGCTAAGATATGGTCACC--TCTCAAG 1891
| |||||||||||| |||||||||||||||| |||| |||||||| ||| |||| |
Sbjct 350 ACGCATTGATCAGCCTGGAAGAAGATCCATCGTTGCTGCGATATGGTTACCTATCTC-A- 407
Query 1892 GGATAATGTTGGAGATGTGAGGAGAGAAGTAGGTAAGCTCTGTGGAGAGCTTAGACCTCA 1951
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct 408 GGATAATGTTGGAGATGTGAGGAGAGAAGTTTCAAAGCTCTGTGGAGAGCTTAGACCACA 467
Query 1952 CGCGCTTGCACTTGTGGCTTCATTCGGGATTCCAGA-TGCGTTCTTGAGTCCAATTGCAT 2010
|||||||||||| || |||||||||| |||||||| | | |||||||||||||||||||
Sbjct 468 CGCGCTTGCACTCGTCACTTCATTCGGCATTCCAGACT-CCTTCTTGAGTCCAATTGCAT 526
Query 2011 TCAACTGGGTCAAAGCTAACGCTTGGTCTTCACTTTAGTTAC-T---AGTAATAATCTCT 2066
||||||||||| |||| || ||||||||||| ||||||||| | ||||| |||||||
Sbjct 527 TCAACTGGGTCGAAGCCAATACTTGGTCTTCAGTTTAGTTACCTGCTAGTAACAATCTCT 586
Query 2067 TC 2068
||
Sbjct 587 TC 588
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 102509512890
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5