BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg919392
Length=1367
Score E
Sequences producing significant alignments: (Bits) Value
AT1G06770.1 | Symbols: DRIP1 | DREB2A-interacting protein 1 | c... 2008 0.0
AT2G30580.1 | Symbols: DRIP2 | DREB2A-interacting protein 2 | c... 435 7e-121
> AT1G06770.1 | Symbols: DRIP1 | DREB2A-interacting protein 1 |
chr1:2078911-2081927 REVERSE LENGTH=1797
Length=1797
Score = 2008 bits (1087), Expect = 0.0
Identities = 1284/1377 (93%), Gaps = 21/1377 (2%)
Strand=Plus/Plus
Query 1 CCCAACAGATAGAGAGAAAGATGGTGATGATTAAGGTGAAAAAGGAGACGATGAGGGCAT 60
||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct 201 CCCAACAGATAAAGAGAAAGA---TGATGATTAAGGTGAAGAAGGAGACGATGAGGGCAT 257
Query 61 GCTTTAGCTGCCCTCTCTGCGACAATATCCTCCGTGACGCCACCACTATCTCCGAGTGCC 120
|||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 258 GCTTAAGCTGCTCTATCTGCGACAATATCCTCCGTGACGCCACCACTATCTCCGAGTGCC 317
Query 121 TTCACACATTTTGTAGGAAATGCATCTATGAAAAGATCACAGAGGATGAGATAGAGACTT 180
| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct 318 TCCACACATTTTGTAGGAAATGCATCTATGAGAAGATCACGGAGGATGAGATAGAGACTT 377
Query 181 GCCCCGTGTGCAATATCGACCTCGGTGGCACCCCATTGGAGAAGCTGAGGCCTGACCACA 240
| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 378 GTCCCGTATGCAATATCGACCTCGGTAGCACCCCATTGGAGAAGCTGAGGCCTGACCACA 437
Query 241 ATTTGCAAGACTTAAGGGCCAAAATTTTTCCTCTAAAACGaaaaaaaGTGAAAGCTCCTG 300
||||||||||||| ||||||||||| ||| |||||||||||| |||||||||||||||||
Sbjct 438 ATTTGCAAGACTTGAGGGCCAAAATCTTTGCTCTAAAACGAAGAAAAGTGAAAGCTCCTG 497
Query 301 GAATTGTGT-CTGTACC-GGCAAAGAGGAAGGAGAGATCTATATCGTCTTTGGTTGTGAC 358
||||||||| || |||| || |||||||||||||||||||||||| |||||||||||||
Sbjct 498 GAATTGTGTCCT-TACCAGG-AAAGAGGAAGGAGAGATCTATATCTTCTTTGGTTGTGAG 555
Query 359 CACACCTA-GGTTGTCATCACAAGCTGGAACAACGGGAAGAAGAACTAAAGCGGCAACAA 417
|||||||| || ||||| ||||||||||||||||| |||||||||||||||| | ||||
Sbjct 556 CACACCTATGG-TGTCAGCACAAGCTGGAACAACGAGAAGAAGAACTAAAGCACCTACAA 614
Query 418 GAAAAGAGTTACGTAATGGTTCTTTGGCTGAGAG-ACGTGTGAAGAAAGAAGAATCTTCT 476
|||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||
Sbjct 615 GAAAAGAGTTACGTAATGGTTCTTTGGCTGAGAGAAC-TGTGAAGAAGGAAGAATCTTCT 673
Query 477 GGTGATGAGCTTCTAGAGAGCACAAGCTCACCCGACACTCTTAACAAATTCACTCAGAAT 536
|| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 674 GGGGATGAGCTTCTGGAGAGCACAAGCTCACCCGACACTCTTAACAAATTCACTCAGAAT 733
Query 537 AAAAGGCACTTAAAGAAGTCATGTAAAGAGTCCTTCTCCAATAAAGAAAACAAGGATGGT 596
||||| || | |||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 734 AAAAGACAGTCAAAGAAGTCATGTAAAGAGTCCATCTCCAATAAAGAAAACAAGGATGGT 793
Query 597 GATGAACCCTGGGATTCCAAATTGGATTGGAAGCCTTTAAATTTTCTGGTTGAAGTGGCA 656
||||||||||||||||||||| |||||||||| ||||| || ||||||||||||||||||
Sbjct 794 GATGAACCCTGGGATTCCAAAATGGATTGGAAACCTTTGAACTTTCTGGTTGAAGTGGCA 853
Query 657 AATAGGACTAAGCCCTTGAAGTCTTCTGCTTCTCAAGGGTCAGGCTCAAAATCTGAGCAC 716
||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 854 AATGGGACAAAGCCCTTGAAGTCTTCTGCTTCTCAAGGGTCAGGTTCAAAATCTGAGCAC 913
Query 717 GCGAATGCATCTCACAATCAATTTCAAGGGAGTAAAACCAAAATTAAGGATaaaaaaaGA 776
||||||| ||||| ||||||||||||||||||||||||||||| |||| ||||||| |||
Sbjct 914 GCGAATGTATCTCGCAATCAATTTCAAGGGAGTAAAACCAAAACTAAGAATAAAAAGAGA 973
Query 777 AAATGTAAACGTGAGGATGA-AA-AG-AGTAATGGTAATCCTACAACATCAGAAACTGCT 833
|||||||||||||||||||| || || | ||||||| ||||||||||||||||||||| |
Sbjct 974 AAATGTAAACGTGAGGATGACAAGAGTAATAATGGTGATCCTACAACATCAGAAACTGTT 1033
Query 834 ACTCCGAAAAGAATGCGTACAACTCAACGCAAAAGGTCTGCCACCACTTTAGGCGATTCA 893
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1034 ACTCCTAAAAGAATGCGTACAACTCAACGCAAAAGGTCTGCCACCACTTTAGGCGATTCA 1093
Query 894 AGAAATTTGCCACTACCAGATGAGTCAAGTGCAAAACAGGAGAGGAGAAATGGTCCCGTT 953
|| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1094 AGGAATTTGCCACAACCAGATGAGTCAAGTGCAAAACAGGAGAGGAGAAATGGTCCCGTT 1153
Query 954 TGGTTCTCACTTGTGGCGTCCAGTGATCAGGAAGGAGGAACTTCTTTACCTCAAATTCCA 1013
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1154 TGGTTCTCACTTGTGGCGTCCAATGATCAGGAAGGAGGAACTTCTTTACCTCAAATTCCA 1213
Query 1014 GCAAATTTTTTGAGAATAAGGGATGGAAATATTCCAGTTTCTTTCATCCAAAAGTACCTC 1073
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1214 GCAAATTTTTTGAGAATAAGGGATGGAAATACAACAGTTTCTTTCATCCAAAAGTACCTC 1273
Query 1074 ATGAGGAAGCTAGATCTCGAGAGTGAAACTGAGATAGAGGTAAGGTGTATGGGAGAAGCA 1133
|||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||
Sbjct 1274 ATGAGGAAGCTAGATCTCGAGAGTGAAAATGAGATAGAGATAAAGTGTATGGGAGAAGCG 1333
Query 1134 GTGATCCCGACGCTGACGCTTCACAAAGTAGTGGATCTATGGCTGCAGAAAAGTTCAAAG 1193
|||||||| |||||||||||| |||| |||||||||||||||| ||||||||||||||
Sbjct 1334 GTGATCCCAACGCTGACGCTTTACAATTTAGTGGATCTATGGCTCCAGAAAAGTTCAAAC 1393
Query 1194 CACCAACGGTTTGCTGCATCGATAGGTTCCTCCGCAAAGGATTTTATGATGGTGCTTGAC 1253
||||||||||||||||||| | ||||||| || ||||||||||||| |||||| |||| |
Sbjct 1394 CACCAACGGTTTGCTGCATTGGTAGGTTCTTCTGCAAAGGATTTTACGATGGTTCTTGTC 1453
Query 1254 TATGCTCGGAAGCTACCAGAGAGTGCAACAAGTAAAAGGACTATAAAGACTCTTGTTGTT 1313
||||||||||||||||||||| ||||||| ||||| ||||| ||||||||| |||||||
Sbjct 1454 TATGCTCGGAAGCTACCAGAG--TGCAACATGTAAA-GGACTTTAAAGACTCATGTTGTT 1510
Query 1314 GCAGAAGAAGATTCTGTGGAGACAGGGTAATCTATT-TTTCTC--TTTATGGAATCT 1367
||||||||||||||||||||||||||||||||| || ||| || ||||||||||||
Sbjct 1511 GCAGAAGAAGATTCTGTGGAGACAGGGTAATCTTTTCTTT-TCGGTTTATGGAATCT 1566
> AT2G30580.1 | Symbols: DRIP2 | DREB2A-interacting protein 2 |
chr2:13026000-13030661 FORWARD LENGTH=2005
Length=2005
Score = 435 bits (235), Expect = 7e-121
Identities = 488/605 (81%), Gaps = 38/605 (6%)
Strand=Plus/Plus
Query 703 CAAAATCTGAGCACGCG-AATGCATCTCACAATCAAT-TTCAAGGGAGTAAAACCAAAAT 760
|||||||||||| | | || ||||| |||||| || |||| ||||||||||||||||
Sbjct 1124 CAAAATCTGAGCTTG-GAAACGCATCCCACAAT-GATGTTCAGGGGAGTAAAACCAAAAC 1181
Query 761 TAAGGATaaaaaaaGAAAATGTAAACGT-GAGGATGA-A-AAG-AGTAATGGTAATCCTA 816
|||||| | |||||||| ||||||| | ||||| || | || | ||| ||| ||||||
Sbjct 1182 AAAGGATCATAAAAGAAAGTGTAAAC-TCGAGGAAGAGATCAGCAATAACGGTGATCCTA 1240
Query 817 CAACATCAGAAACTGCTACTCCGAAAAGAATGCGTAC-AACTCAACGCAAAAGGTCTGCC 875
||||||||||||||||||| | ||| ||| |||| | |||| ||||||||| | |
Sbjct 1241 CAACATCAGAAACTGCTACACTTAAACGAACGCGT-CGGACTCGTCGCAAAAGG--T--C 1295
Query 876 A-CCACTTTAGGCGATTCAAGAAATTTGCCAC---TACCAGATG-AGTCAAGTGC-AAAA 929
| | ||||| || ||||| || || || |||| |||||| || || |||| | ||||
Sbjct 1296 ATCTACTTTTGGTGATTCTAG-AA-TT-CCACTGTTACCAGGTGCAG-CAAG-CCTAAAA 1350
Query 930 CAGGAGAGGAGAAATGGTCCCGTTTGGTTCTCACTTGTGGCGTCCAGTGATCAGGAAGGA 989
|||||||||||||| |||| ||||||||||||||||| ||||| ||| |||||||||||
Sbjct 1351 CAGGAGAGGAGAAACGGTCATGTTTGGTTCTCACTTGTAGCGTCAAGTAATCAGGAAGGA 1410
Query 990 GGAA-CTTCTTTACCTCAAATTCCAGCAAATTTTTTGAGAATAAGGGATGGAAATATTCC 1048
||| | || || ||||| ||||||||||| | ||||||||||||||||||||||||||
Sbjct 1411 -GAAGCATCATTGCCTCAGATTCCAGCAAACTACTTGAGAATAAGGGATGGAAATATTCC 1469
Query 1049 AGTTTCTTTCATCCAAAAGTACCTCATGAGGAAGCTAGATCTCGAGAGTGAA-ACTGAGA 1107
||||||||| |||||||||||||||||||||||||| |||||| |||||||| | ||||
Sbjct 1470 AGTTTCTTTTATCCAAAAGTACCTCATGAGGAAGCTTGATCTCAAGAGTGAAGA-TGAGG 1528
Query 1108 TAGAGGTAAGGTGTATGGGAGAAGCAGTGATCCCGACGCTG-ACGCTTCACAAAGTAGTG 1166
||||| ||| |||||||||||| |||||||||| ||| || | |||||||| ||||
Sbjct 1529 TAGAGATAACATGTATGGGAGAACCAGTGATCCCAACGTTGCA-GCTTCACAGCTTAGTA 1587
Query 1167 GATCTATGGCTGCAGAA-AAGTTCAAAGCACCAACG-GTTTGCTGCATCGATAGGTTCCT 1224
|| |||||| || | || || ||| ||||| ||| | || ||||| || |||||||| |
Sbjct 1588 GACCTATGGTTGGA-AACAACTTCTAAGCATCAAAGAGTC-GCTGCGTCAATAGGTTCAT 1645
Query 1225 CCGCAAAGGATTTTATGATGGTGCTTGACTATGCTCGGAAGCTACCAGAGAGTGCAACAA 1284
| |||||||| ||| | |||||||| | ||| |||||||||| || || | ||||||||
Sbjct 1646 CTGCAAAGGAATTTGTAATGGTGCTAGTTTATTCTCGGAAGCTCCCTGA-A-TGCAACAA 1703
Query 1285 GTAAA 1289
||||
Sbjct 1704 CTAAA 1708
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 67318930845
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5