BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg919477
Length=2482
Score E
Sequences producing significant alignments: (Bits) Value
AT1G07510.1 | Symbols: ftsh10 | FTSH protease 10 | chr1:2305378... 3973 0.0
AT2G29080.1 | Symbols: ftsh3 | FTSH protease 3 | chr2:12489627-... 2032 0.0
> AT1G07510.1 | Symbols: ftsh10 | FTSH protease 10 | chr1:2305378-2309544
FORWARD LENGTH=2917
Length=2917
Score = 3973 bits (2151), Expect = 0.0
Identities = 2371/2479 (96%), Gaps = 8/2479 (0%)
Strand=Plus/Plus
Query 7 CTGATTCTCTGACAATGATATTCTCCAAGCTTGGTTCTTCACTCGCTCGATCCTCTCGTT 66
|||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct 298 CTGATTATCTGACAATGATATTCTCCAAGCTTGGTTCTTCCCTCGCTCGATCCTCACGTT 357
Query 67 CTAAGGGATTGGTGTACGGCGGTGGTGTGCGATCGGCGAT-TTTAAACCAAGGGAGGCTA 125
|||||||||| |||||||||||||||||| |||||||| | ||| |||||||||||| ||
Sbjct 358 CTAAGGGATTTGTGTACGGCGGTGGTGTGAGATCGGCGGTATTT-AACCAAGGGAGGTTA 416
Query 126 CGAGCGCCGCAGAATCTTGAGGCGGCCGTCAATCAGGTGGATGGTGGATTAGGGTTTCTG 185
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct 417 CGAGCGCCGCAGAATCTCGAGGCGGCCGTCAATCAGGTGGATGGTGGATTAGGGTTTTTG 476
Query 186 AGGCGGCACTTTGCTTCTTTAGCTGCTCGGAAGGGACTAGATGCCGGTGATTTAAGCCGC 245
|||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||
Sbjct 477 AGGCGGCACTTTGCTTCTTTTGCTGCTCGAAAGGGACTAGAAGCCGGTGATTTAAGCCGT 536
Query 246 GTTTTCGCTAACCCTAGATTGCGTCGGTTCTTTTCTAGCCAAAGCCCGAAGAAAAAGAAT 305
| |||||||||||||||||||||||||||||||||||| |||| ||| ||||| ||||||
Sbjct 537 GCTTTCGCTAACCCTAGATTGCGTCGGTTCTTTTCTAGTCAAACCCCAAAGAAGAAGAAT 596
Query 306 TATGAGAACTACTATCCAAAAGACAGTAAGAAAGCACCCAAGAATGAGCAGAAATCCGAA 365
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 597 TATGAGAACTACTATCCAAAAGACAGTAAGAAAGCACCCAAGAATGAGCAGAAATCTGAA 656
Query 366 TCCGGAGAGGGTTCAAAGAAGAATGAAAACGAGAATGTTGGGGACATGTTCACCAAGGAA 425
||| |||| ||||||||||| ||||||||||| |||| ||||||| |||| | || |||
Sbjct 657 TCCAGAGATGGTTCAAAGAAAAATGAAAACGAAAATGCTGGGGACGCGTTCTCAAATGAA 716
Query 426 TATCAAAATATGTTAATTCCTCTGATGGCCATTGCTTTAATCCTTTCTACTTTCTCTCTT 485
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 717 TATCAAAATATGTTAATTCCTCTTATGGCCATTGCTTTAATCCTTTCTACTTTCTCTCTT 776
Query 486 GGTTCCCGAGAACAGCAACAGATTAGTTTCCAGGAGTTCAAAAACAAGCTCCTTGAGCCT 545
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct 777 GGTTCCCGAGAACAGCAACAGATTAGTTTCCAGGAGTTCAAAAACAAGCTCCTCGAGGCT 836
Query 546 GGTCTAGTGGATCACATAGATGTTTCTAACAAATCAGTCGCGAAAGTCTATGTGAGGAGT 605
||| |||||||||||||||||||||| || ||| |||||| ||||||||||||||||||
Sbjct 837 GGTTTAGTGGATCACATAGATGTTTCCAATAAAGAAGTCGCAAAAGTCTATGTGAGGAGT 896
Query 606 TCACCGAAAAA-CCAAACAACGGAAGAAGTTGTTCAAGGTCCTGGTAATGGAGTTCCTGC 664
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 897 TCACC-AAAAAGCCAAACAACGGAAGAAGTTGTTCAAGGTCCTGGTAATGGAGTTCCTGC 955
Query 665 TAAAGGACGTGGTGGTCAGTATAAGTACTACTTTAATATTGGTAGCGTTGAAACATTTGA 724
||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct 956 TAAAGGACGTGGTGGTCAGTATAAGTACTACTTTAATATTGGTAGTGTTGAATCATTTGA 1015
Query 725 GGAGAAACTTGAAGAGGCTCAAGAAGCGATAGGCGTTAATTCTCATGACTTTGTTCCTGT 784
||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 1016 GGAGAAACTAGAAGAGGCCCAAGAAGCTATAGGCGTTAATTCTCATGACTTTGTTCCTGT 1075
Query 785 CACCTACGTCTCG-GAAA-TGATCTGGTACCAGGAAATGTTGAGGTTTGCACCGACTTTA 842
|||||||||| | |||| | ||||||||||||||| | ||||| |||||||||||||||
Sbjct 1076 CACCTACGTC-AGTGAAACT-ATCTGGTACCAGGAACTATTGAGATTTGCACCGACTTTA 1133
Query 843 CTTCTCTTGGGTACGCTAATTTATGGGGCAAGACGGATGCAAGGTGGACTGGGAGGTGTA 902
|||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||| ||
Sbjct 1134 CTTCTCGTGGCTACGCTAATTTTTGGGGCAAGACGGATGCAAGGTGGACTGGGAGGTTTA 1193
Query 903 GGCGGACCTGGTGGGAAGGGTGGCCGTGGAATTTTCAATATAGGGAAAGCTCAAATTACG 962
||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||
Sbjct 1194 GGCGGACCTGGTGGGAAGGCTGGCCGTGGAATTTTCAATATAGGGAAAGCTCAAATAACG 1253
Query 963 AGAGCAGATAAAAATTCCAAGAATAAGATATATTTTAAAGATGTTGCGGGATGTGAGGAG 1022
|||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1254 AGAGCAGATAAAAACTCCAAGAATAAGATATATTTTAAAGATGTTGCGGGATGCGAGGAG 1313
Query 1023 GCTAAACAAGAAATTATGGAATTTGTGCATTTCCTTCAGAACCCAAAGAAATATGAAGAT 1082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1314 GCTAAACAAGAAATTATGGAATTTGTGCATTTCCTTCAGAACCCAAAGAAATATGAAGAT 1373
Query 1083 TTGGGAGCTAAAATCCCAAAAGGTGCGCTTTTAGTTGGCCCACCAGGGACGGGAAAGACC 1142
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct 1374 TTGGGAGCTAAAATCCCAAAAGGTGCGCTTTTAGTTGGCCCACCCGGGACTGGAAAGACC 1433
Query 1143 CTTCTAGCAAAAGCTACTGCGGGAGAATCAGCTGTACCGTTTCTGTCAATATCTGGTTCA 1202
|||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct 1434 CTTCTAGCAAAAGCTACTGCAGGAGAATCAGCTGTACCGTTTCTCTCAATATCTGGTTCA 1493
Query 1203 GATTTCATGGAAATGTTTGTTGGTGTTGGACCTTCAAGAGTGAGAAACTTGTTTCAAGAG 1262
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1494 GATTTCATGGAGATGTTTGTTGGTGTTGGACCTTCCAGAGTGAGAAACTTGTTTCAAGAG 1553
Query 1263 GCTAGACAATGTGCACCTAGCATAATATTTATTGATGAGATCGATGCGATTGGCCGTGCA 1322
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1554 GCTAGACAGTGTGCACCTAGCATAATATTTATTGATGAGATCGATGCGATTGGCCGTGCG 1613
Query 1323 AGAGGTCGTGGAGGTTTCTCTGGTGGAAATGATGAGCGTGAAAGCACACTTAATCAGCTG 1382
|| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1614 AGGGGACGTGGAGGTTTCTCTGGTGGAAATGATGAGCGTGAAAGCACACTTAATCAACTG 1673
Query 1383 CTAGTTGAAATGGATGGATTTGGTACTACCGCTGGAGTTGTCGTCCTTGCTGGGACTAAC 1442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1674 CTAGTTGAAATGGATGGATTTGGTACTACCGCTGGAGTTGTCGTCCTTGCTGGGACTAAC 1733
Query 1443 AGGCCAGATATTCTTGATAAAGCTTTATTACGACCTGGCCGGTTTGATCGCCAGATAACC 1502
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1734 AGGCCAGATATTCTTGATAAAGCTTTATTACGGCCTGGCCGGTTTGATCGCCAGATAACC 1793
Query 1503 ATAGATAAACCTGATATTAAAGGCCGTGATCAGATATTCCAGATATACCTGAAGAAGATC 1562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1794 ATAGATAAACCTGATATTAAAGGCCGTGATCAGATATTCCAGATATACCTGAAGAAGATC 1853
Query 1563 AAACTTGATCACGAGCCCTCATATTACTCGCAAAGGCTTGCAGCCCTCACTCCCGGATTT 1622
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1854 AAACTTGATCACGAGCCCTCATATTACTCACAAAGGCTTGCAGCCCTCACTCCCGGATTT 1913
Query 1623 GCTGGAGCTGACATTGCGAATGTCTGTAACGAGGCGGCTCTTATTGCTGCCAGACATGAA 1682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1914 GCTGGAGCTGACATTGCGAATGTCTGTAACGAGGCGGCTCTTATTGCTGCCAGACATGAA 1973
Query 1683 GGAGCAACAGTTACAATGGCACACTTTGACTCTGCAATTGATCGTGTTATTGGAGGTCTG 1742
|||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||
Sbjct 1974 GGAGCAACAGTTACAATGGCGCACTTTGACTCTGCAATCGATCGTGTTATTGGTGGTCTG 2033
Query 1743 GAGAAGAAAAACCGGGTAATAAGCAAGCAGGAGCGCCGTACAGTTGCATATCATGAATCT 1802
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2034 GAGAAGAAAAACCGGGTAATAAGCAAGCTGGAGCGCCGTACAGTTGCATATCATGAATCT 2093
Query 1803 GGCCACGCGGTTGCTGGTTGGTTCCTGGAACATGCGGAACCATTGCTAAAGGTGACTATT 1862
||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2094 GGCCATGCGGTTGCTGGGTGGTTCCTGGAACATGCGGAACCGTTGCTAAAGGTGACTATT 2153
Query 1863 GTTCCTCGTGGCACAGCAGCGCTCGGGTTTGCCCAGTATGTTCCAAATGAAAACTTGCTC 1922
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2154 GTTCCTCGTGGCACAGCAGCGCTCGGATTTGCCCAGTATGTTCCAAATGAAAACTTGCTC 2213
Query 1923 ATGACAAAAGAACAACTCTTTGACATGACTTGCATGACTCTCGGGGGCCGGGCAGCTGAA 1982
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2214 ATGACAAAAGAACAACTCTTTGATATGACTTGCATGACTCTCGGGGGCCGGGCAGCTGAA 2273
Query 1983 CAGGTATTAATAGGAAGAATATCGACCGGGGCTCAGAACGATCTGGAAAAGGTGACTAAG 2042
|||||||| || ||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct 2274 CAGGTATTGATTGGAAGAATATCCACTGGGGCTCAGAACGATCTGGAAAAGGTGACTAAG 2333
Query 2043 ATGACTTACGCGCAAGTGGCGGTGTACGGATTCAGCGACAAGATAGGGTTGCTTTCATTC 2102
|||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct 2334 ATGACTTATGCGCAAGTGGCAGTGTACGGATTCAGCGACAAGATAGGATTGCTTTCATTC 2393
Query 2103 CCGCAACGGGAAGACGAGTTCTCCAAGCCGTACAGCAACAGAACTGGTGCGATGATAGAT 2162
|| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2394 CCACAACGGGAAGACGAGTTCTCCAAGCCGTACAGCAACAGAACCGGTGCGATGATAGAT 2453
Query 2163 GAAGAGGTCCGAGAATGGGTGGGGAAAGCTTACAAACGGACGGTTGAGCTGATCGAGGAA 2222
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 2454 GAAGAGGTCCGAGAATGGGTGGGGAAAGCTTACAAGCGGACGGTTGAGCTGATAGAGGAA 2513
Query 2223 CACAAAGAGGAAGTGGCTCAGATCGCTGAGCTCTTGCTAGAGAAGGAGGTTCTGCATCAG 2282
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2514 CACAAAGAGCAAGTGGCTCAGATCGCTGAGCTCTTGCTAGAGAAGGAGGTTTTGCATCAG 2573
Query 2283 GATGATCTTACTAAAGTATTGGGTGAGCGTCCATTTAAGTCGGGTGAGACAACGAATTAC 2342
|||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct 2574 GATGATCTCACTAAAGTATTGGGCGAGCGTCCGTTTAAGTCGGGTGAGACAACGAATTAC 2633
Query 2343 GACAGGTTTAAATCTGGATTTGAAGAGACGGAGAAGGAGAGCCAGAAGGAGTCTGTGCCG 2402
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2634 GACAGGTTTAAATCTGGATTTGAAGAGTCGGAGAAGGAGAGCCAGAAGGAGTCTGTGCCG 2693
Query 2403 GTGAAGCCTGTGGAGGATGATGGAGTTCCACCGCTTGAGCCACAGGTGGTTCCGACGTAG 2462
|||||||||||||||||||||||| |||| || |||||||||||||| ||||||||||||
Sbjct 2694 GTGAAGCCTGTGGAGGATGATGGAATTCCGCCTCTTGAGCCACAGGTAGTTCCGACGTAG 2753
Query 2463 ATGTTGGAGACTCCCAAAG 2481
|||||||||| |||||||
Sbjct 2754 CTGTTGGAGACACCCAAAG 2772
> AT2G29080.1 | Symbols: ftsh3 | FTSH protease 3 | chr2:12489627-12493285
REVERSE LENGTH=3000
Length=3000
Score = 2032 bits (1100), Expect = 0.0
Identities = 1960/2367 (83%), Gaps = 92/2367 (4%)
Strand=Plus/Plus
Query 141 CTTGAGGCGGC--C-GTCAATCAGGTGGATGGTGGATTAGGGTTTCTGAGGCGGCACTTT 197
||||||||||| | || ||| | ||||| ||||||||||||||| | || | ||||||
Sbjct 395 CTTGAGGCGGCGTCTGTGAATGAAGTGGAAGGTGGATTAGGGTTTATAAGAAGACACTTT 454
Query 198 GCTTCTTTAGCTGCTCGGAAGGGACTAGATGC--CGGTGATTTAAGCCGCGTTTTCGCTA 255
|||||||||||| | |||||||| ||| | | |||||| | | ||||| ||||
Sbjct 455 GCTTCTTTAGCTTCACGGAAGGGTTTAG-T-CAATAATGATTTGATTGGTGTTTTTGCTA 512
Query 256 ACCCTAGA-TTGCGTCGGTTCTTTTCTAGCCAAAGC-CCGAAGAAAAAGAATTATGAGAA 313
| || ||| || ||| | ||||| ||| | |||| || ||||| ||||||||||||||
Sbjct 513 ATCCAAGACTT-CGTAGATTCTTCTCT-GATGAAGCTCCTAAGAAGAAGAATTATGAGAA 570
Query 314 CTACTATCCAAAAGACAGTAAGAAAGCACCCAAGAATGAGCAGAAATCCGAATC-CGGAG 372
||| | ||| |||| | |||| ||| |||||||| ||| |||||||| | | | ||
Sbjct 571 CTATTTTCCTAAAG--A-TAAGCAAGAACCCAAGAGTGATCAGAAATCAG-AGCATAAAG 626
Query 373 AGGGTTCA-AAGAAGAATGAAAACGAGAATGTTGGG-GACATGTTCACCAA-GGAATAT- 428
|||||||| || ||||||||||| ||||||| |||| || ||||||| || | || |
Sbjct 627 AGGGTTCAGAA-AAGAATGAAAATGAGAATG-TGGGAGATATGTTCATGAACCG-AT-TC 682
Query 429 CAAAATATGTTAATTCCTCTGA-TGGC-CATTGCTTTAATCCTTTCTACTTTCTC-TCTT 485
|||||| || |||||||||| | | || | ||||| || || ||||||||||||| | ||
Sbjct 683 CAAAATTTGCTAATTCCTCT-ACTAGCTC-TTGCTGTATTCTTTTCTACTTTCTCGT-TT 739
Query 486 GGTTCCCGAGAACAGCAACAGATTAGTTTCCAGGAGTTCAAAAACAAGCTCCTTGAGCCT 545
|| || | ||||| |||||||| |||||||||||||||||||||||||| || ||||||
Sbjct 740 GGCTCTGGGGAACAACAACAGATAAGTTTCCAGGAGTTCAAAAACAAGCTACTCGAGCCT 799
Query 546 GGTCTAGTGGATCACATAGATGTTTCTAACAAATCAGTCGCGAAAGTCTATGTGAGGAGT 605
||| |||| || |||||||||||||| ||||||||||| || |||||||| ||||||||
Sbjct 800 GGTTTAGTTGACCACATAGATGTTTCAAACAAATCAGTAGCAAAAGTCTACGTGAGGAGC 859
Query 606 TCACCGAAAAACCAAAC-AACGGAA--GAAGTTGTTCAAGGTCCTGGTAATGG-AGTTCC 661
|||||||| ||| ||| ||| || || ||||| || ||| |||||| || | ||||
Sbjct 860 ACACCGAAAGACC-AACAAAC--AACTGACGTTGTCCATGGTAATGGTAACGGTA-TTCC 915
Query 662 TGCT-AAAGGACGTGGTGGTCAGTATAAGTACTACTTTAATATTGGTAGCGTTGAAACAT 720
|||| |||| || |||||||||||||||||||||||| ||||| ||||| ||||| | |
Sbjct 916 TGCTAAAAGAAC-TGGTGGTCAGTATAAGTACTACTTCAATATCGGTAGTGTTGATTCTT 974
Query 721 TTGAGGAGAAACTTGAAGAGGCTCAAGAAGCGATAGGCGTTAATTC-TCATGACTTTGTT 779
||||||||||||| ||||| |||||||||||| |||| ||| | || |||||| | ||||
Sbjct 975 TTGAGGAGAAACTCGAAGAAGCTCAAGAAGCGTTAGGTGTTGA-TCGTCATGAATATGTT 1033
Query 780 CCTGTCACCTACGTCTCGGAAATGATCTGGTACCAGGAAATGTTGAGGTTTGCACCGACT 839
|||||||| |||||||| |||||| ||||||| || || | |||||||||||||||||
Sbjct 1034 CCTGTCACATACGTCTCTGAAATGGTCTGGTATCAAGAGTTCATGAGGTTTGCACCGACT 1093
Query 840 TTACTT-CTCTTGGGTACGCTAATTTATGGGGCAAGACGGATGCAAGGTGGACTGGGAGG 898
|| || ||||||||||| || || ||||| || |||||||||||||||||| | | ||
Sbjct 1094 TT-GTTGCTCTTGGGTACTCTGATCTATGGTGCGAGACGGATGCAAGGTGGA-T-TG-GG 1149
Query 899 TGTAGGCGGACCTGGTGGGAAGGGTGGCCGTGGAATTTTCAATATAGGGAAAGCTCA-AA 957
|||||| ||| |||| || ||| ||| |||||||||||||||||||| |||||| | ||
Sbjct 1150 TGTAGGAGGAACTGGCGGTAAGAATGGTCGTGGAATTTTCAATATAGGCAAAGCT-ACAA 1208
Query 958 TTACGAGAGCAGATAAAAATTCCAAGAATAAGATATATTTTAAAGATGTTGCGGGATGTG 1017
| |||||||| |||||| |||||||||||||||| ||||| || |||||||| |||||||
Sbjct 1209 TAACGAGAGCTGATAAACATTCCAAGAATAAGATTTATTTCAAGGATGTTGCTGGATGTG 1268
Query 1018 AGGAGGCTAAACAAGAAATTATGGAATTTGTGCATTTCCTTCAGAACCCAAAGAAATATG 1077
| ||||||||||||||||||||||| ||||| ||||||||| ||||||||||||| ||||
Sbjct 1269 ACGAGGCTAAACAAGAAATTATGGAGTTTGTACATTTCCTTAAGAACCCAAAGAAGTATG 1328
Query 1078 AAGATTTGGGAGCTAAAATCCCAAAAGGTGCGCTTTTAGTTGGCCCACCAGGGACGGGAA 1137
|||||||||| |||||||| || |||||||| |||||||| || || || || || ||||
Sbjct 1329 AAGATTTGGGTGCTAAAATTCCGAAAGGTGCACTTTTAGTCGGTCCGCCTGGAACCGGAA 1388
Query 1138 AGACCCTTCTAGCAAAAGCTACTGCGGGAGAATCAGCTGTACCGTTTCTGTCAATATCTG 1197
|||||||| |||||||||| || || |||||||| | ||| || |||||||| || ||||
Sbjct 1389 AGACCCTTTTAGCAAAAGCCACAGCAGGAGAATCTGGTGTGCCATTTCTGTCTATTTCTG 1448
Query 1198 GTTCAGATTTCATGGAAATGTTTGTTGGTGTTGGACCTTCAAGAGTGAGAAACTTGTTTC 1257
| |||||||||||||| ||||||||||||||||| ||||| || |||||| | ||||| |
Sbjct 1449 GCTCAGATTTCATGGAGATGTTTGTTGGTGTTGGGCCTTCGAGGGTGAGACATTTGTTCC 1508
Query 1258 AAGAGGCTAGACAATG-TGCACCTAGCATAATATTTATTGATGAGATCGATGCGATTGGC 1316
||||||| |||||| | |||||| ||||| |||||||| |||||||| ||||| |||||
Sbjct 1509 AAGAGGCGAGACAA-GCTGCACCGAGCATTATATTTATCGATGAGATTGATGCTATTGGT 1567
Query 1317 CGTGCAAGAGGTCGTGGAGGTTTCTCTGGTGGAAATGATGAGCGTGAAAGCACACTTAAT 1376
|| ||||||||||||||||| || | || ||||||||||||||||||||||| || |||
Sbjct 1568 CGGGCAAGAGGTCGTGGAGG-TT-T-AGGCGGAAATGATGAGCGTGAAAGCACTCTGAAT 1624
Query 1377 CAGCTGCTAGTTGAAATGGATGGATTTGGTACTACCGCTGGAGTTGTCGTCCTTGCTGGG 1436
||| ||||||||||||||||||| |||||||| |||||||| ||||| || ||||||||
Sbjct 1625 CAGTTGCTAGTTGAAATGGATGGTTTTGGTACAACCGCTGGTGTTGTGGTTCTTGCTGGA 1684
Query 1437 ACTAACAGGCCAGATATTCTT-GATAAAGCTTTATTACGACCTGGCCGGTTTGATCGCCA 1495
|| ||||| || |||||| || ||||||||||| ||| | ||||| || |||||||||||
Sbjct 1685 ACCAACAGACCGGATATT-TTGGATAAAGCTTTGTTAAGGCCTGGACGTTTTGATCGCCA 1743
Query 1496 GATAACCATAGATAAACCTGATATTAAAGGCCGTGATCAGATATTCCAGATATACCTGAA 1555
|||||| || |||||||||||||| ||||| ||||||||||| ||| |||| ||| ||||
Sbjct 1744 GATAACTATTGATAAACCTGATATCAAAGGGCGTGATCAGATTTTCAAGATTTACTTGAA 1803
Query 1556 GAAGATCAAACTTGATCACGAGCCCTCATATTACTCGCAAAGGCTTGCAGCCCTCACTCC 1615
|||||||||||||||||| ||||| ||||||||||| ||||||||||| || ||||||||
Sbjct 1804 GAAGATCAAACTTGATCATGAGCCATCATATTACTCTCAAAGGCTTGCTGCTCTCACTCC 1863
Query 1616 CGGATTTGCTGGAGCTGACATTGCGAATGTCTGTAACGAGGCGGCTCTTATTGCTGCCAG 1675
||| ||||| ||||||||||||||||||||||||||||| || |||||||||||||| ||
Sbjct 1864 CGGGTTTGCAGGAGCTGACATTGCGAATGTCTGTAACGAAGCAGCTCTTATTGCTGCTAG 1923
Query 1676 ACATGAAGGAGCAACAGTTACAATGGCACACTTTGACTCTGCAATTGATCGTGTTATTGG 1735
||| ||||||||||| ||||| |||||||||||||| ||||| |||||||||||||||||
Sbjct 1924 ACACGAAGGAGCAACGGTTACTATGGCACACTTTGAATCTGCGATTGATCGTGTTATTGG 1983
Query 1736 AGGTCTGGAGAAGAAAAACCGGGTAATAAGCAAGCAGGAGCGCCGTACAGTTGCATATCA 1795
||||| ||||||||||||||||| ||||||||| |||||| |||||||||||||||||
Sbjct 1984 TGGTCTTGAGAAGAAAAACCGGGTGATAAGCAAGTTGGAGCGACGTACAGTTGCATATCA 2043
Query 1796 TGAATCTGGCCACGCGGTTGCT-GGTTGGTTCCTGGAACATGCGGAACCATTGCT-AAAG 1853
||||||||| ||||| |||| | || |||||||| |||||||| || || || || |||
Sbjct 2044 TGAATCTGGTCACGCAGTTG-TAGGGTGGTTCCTTGAACATGCAGAGCCGTTACTGAAA- 2101
Query 1854 GTGACTATTGTTCCTCGTGGCACAGCAGCGCTCGGGTTTGCCCAGTATGTTCCAAATGAA 1913
||||||||||| || ||||||||||| || ||||| ||||| || || |||||||| |||
Sbjct 2102 GTGACTATTGTACCACGTGGCACAGCGGCTCTCGGATTTGCACAATACGTTCCAAACGAA 2161
Query 1914 AA-CTTGCTCATGACAAAAGAACAACTCTTTGACATGACTTGCATGACTCTCGGGGGCCG 1972
|| ||| |||||||| ||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 2162 AACCTT-CTCATGACCAAAGAGCAACTCTTTGACATGACTTGCATGACTCTCGGAGGCCG 2220
Query 1973 GGCAGCTGAACAGGTATTAATAGG-AAGAATATCGACCGGG-GCTCAGAACGATCTGGAA 2030
|||||||| |||||||| ||||| || ||| || || ||| || ||||||||||| ||
Sbjct 2221 TGCAGCTGAGCAGGTATTGATAGGTAA-AATCTCAAC-GGGTGCGCAGAACGATCTAGAG 2278
Query 2031 AAGGTGACTAAGATGACTTACGCGCAAGTGGCGGTGTACGGATTCAGCGACAAGATAGGG 2090
|||||||| |||||||||||||||||||| || ||||| || ||||| |||||| | |||
Sbjct 2279 AAGGTGACGAAGATGACTTACGCGCAAGTAGCTGTGTATGGTTTCAGTGACAAGGTTGGG 2338
Query 2091 TTGCTTTCATTCCCGC-AACGGGA--A-G---ACGAGTTCTCCAAGCCGTACAGCAACAG 2143
| || || || || | || |||| | | |||| ||||| || || ||||||||||
Sbjct 2339 CTACTCTCGTTTCCACCAA-GGGATGATGGCTACGACTTCTCTAAACCATACAGCAACAA 2397
Query 2144 AACTGGTGCGATGATAGATGAAGAGGTCCGAGAATGGGTGGGGAAAGCTTACAAACGGAC 2203
||| ||||| || ||||| ||||| || | || ||||||| |||||||| | |||||
Sbjct 2398 AACCGGTGCTATCATAGACGAAGAAGTTAGGGACTGGGTGGCCAAAGCTTATGAGCGGAC 2457
Query 2204 GGTTGAGCTGATCGAGGAACACAAAGAGGAAGTGGCTCAGATCGCTGAGCTCTTGCTAGA 2263
|| |||||| | ||||||||||||| | |||||||| ||||||| ||||| || |||||
Sbjct 2458 CGTAGAGCTGGTTGAGGAACACAAAGTGAAAGTGGCTGAGATCGCCGAGCTTTTACTAGA 2517
Query 2264 GAAGGAGGT-TCTGCATCAGGATGATCT-T-ACTAAAGTATTGGGTGAGCGTCCATTTAA 2320
||| ||||| | |||||||||||||||| | | ||| | || ||||| ||||| |||||
Sbjct 2518 GAAAGAGGTGT-TGCATCAGGATGATCTCTTAA-AAATT-TTAGGTGAACGTCCGTTTAA 2574
Query 2321 GTCGGGTGAGA-CAACGAATTACGACAGGTTTAAATCTGGATTTGAAGAGACGGAGAAGG 2379
||| | |||| || | ||||| ||| |||| || ||||| ||||||||||| |||||||
Sbjct 2575 GTCAGCTGAGGTCA-CTAATTATGACCGGTTCAAGTCTGGGTTTGAAGAGACTGAGAAGG 2633
Query 2380 AG--AGCCAGAAGGAGTCTGTGCCGGTGAAGCCTGTGGAGGATGATGGAGTTCCACCGC- 2436
| |||| | | | | | | || ||||||||| ||||||||||| ||| ||||
Sbjct 2634 ACTCAGCC-GCC--ACCCC-TACAG-TGGAGCCTGTGGTGGATGATGGAGCTCCCCCGCC 2688
Query 2437 -TT-GAGCCACAGGTGGTTCCGACGTA 2461
|| || || ||||| |||||||||||
Sbjct 2689 GTTTGAACCCCAGGTTGTTCCGACGTA 2715
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 123159845065
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5