BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg919553
Length=2422
Score E
Sequences producing significant alignments: (Bits) Value
AT1G08130.1 | Symbols: ATLIG1, LIG1 | DNA ligase 1 | chr1:25427... 3843 0.0
AT1G49250.1 | Symbols: | ATP-dependent DNA ligase | chr1:18220... 1868 0.0
> AT1G08130.1 | Symbols: ATLIG1, LIG1 | DNA ligase 1 | chr1:2542702-2547946
REVERSE LENGTH=2715
Length=2715
Score = 3843 bits (2081), Expect = 0.0
Identities = 2311/2423 (95%), Gaps = 11/2423 (0%)
Strand=Plus/Plus
Query 1 CCTAATCTCAAAATCGACTGATGTTAGCGATTCGATCGTCGAATTACCTCCGATGCATAC 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 112 CCTAATTTCAAAATCGACTGATGTTAGCGATTCGATCGTCGAATTACCTCCGATGCATAC 171
Query 61 CTTCTCTCTGTACTAAAACCCAAATCTCTCAATTCTCCTCCGTGTTACTCTCTTTTAGCC 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 172 CTTCTCTCTGTACTAAAACCCAAATCTCTCAATTCTCCTCCGTGTTAATCTCTTTTAGCC 231
Query 121 GCCAAGTTTCCCACTTGCGCCTTACCTCGTGCCATAGAGCCATGTCTTCTTCCCGCCCTT 180
||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct 232 GCCAAATTTCCCACTTGCGTCTTAGCTCGTGCCATAGAGCCATGTCTTCTTCCCGCCCTT 291
Query 181 CTGCATTTGACGCTCTCATGTCCAATGCTCGCGCAGCTGCCAAGAAGAAGACGCCCCAGA 240
|||||||||| |||||||||||||||||||| ||||| |||||||||||||| |||||||
Sbjct 292 CTGCATTTGATGCTCTCATGTCCAATGCTCGTGCAGCCGCCAAGAAGAAGACTCCCCAGA 351
Query 241 CCACTACA-TCGTCTCGCTCTCCGAATAAAAGGAAAATTGGGGAAACCCAAGATGCTAAT 299
| |||| | | ||||||||| ||||| |||||||||||||| ||||||||||||||||||
Sbjct 352 CAACTA-ATTTGTCTCGCTCGCCGAACAAAAGGAAAATTGGAGAAACCCAAGATGCTAAT 410
Query 300 TTGGGCAAAACCCTTGTTTCCGAAGGTACACTTCCAAAAACGGAGGATCCGGTGGAGCCT 359
||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 411 TTGGGCAAAACTATTGTTTCCGAAGGTACACTTCCAAAAACGGAGGATCTGCTGGAGCCT 470
Query 360 ATTTCTGATTCTGCAAAACCCAGATCGGATACGTCGTCAGTTGCGGAAGATTCGAAGACC 419
|||||||||||||||| |||||||||||||| |||||| ||||||| ||||| |||||
Sbjct 471 GTTTCTGATTCTGCAAATCCCAGATCGGATACATCGTCAATTGCGGAGGATTCAAAGACG 530
Query 420 GGAACGAAAAAGGCTAGGACTTTGAGCAAGACGGATAAAATTGACGAAATGAAGAGCAAA 479
||| |||||||||||| ||||||||||||||| | ||||||||||||||||||
Sbjct 531 GGAGCGAAAAAGGCTAAGACTTTGAGCAAGAC-------A--GACGAAATGAAGAGCAAA 581
Query 480 ATTGGATTGTTGAAGAAGAAGCCTAATGATTTCGATCCTGACAAAGTGTCTTGCTGGGAG 539
||||||||| ||||||||||||| ||||||||||||||||| ||| ||||||||||||||
Sbjct 582 ATTGGATTGCTGAAGAAGAAGCCGAATGATTTCGATCCTGAAAAAATGTCTTGCTGGGAG 641
Query 540 AAAGGGGAGAGAGTTCCGTTTCTGTTTCTCGCATTGGCTTTTGATCTGATTTCAAATGAA 599
||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||
Sbjct 642 AAAGGGGAGAGAGTTCCGTTTCTGTTTGTCGCATTGGCTTTTGATCTGATCTCAAATGAA 701
Query 600 AGTGGGCGAATTGTGATTACTGATATTCTGTGTAACATGTTGAGAACCGTTATTGCCACC 659
||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 702 AGTGGCCGGATTGTGATTACTGATATTCTGTGTAACATGTTGAGAACTGTTATTGCCACT 761
Query 660 ACTCCTGAGGATTTGGTTGCTACTGTTTACCTTGCGGCAAATGAGATTGCCCCTGCTCAT 719
||||||||||||||||| ||||||||||| ||| |||| |||||||||||||| ||||||
Sbjct 762 ACTCCTGAGGATTTGGTCGCTACTGTTTATCTTTCGGCGAATGAGATTGCCCCGGCTCAT 821
Query 720 GAAGGTGTAGAATTGGGAATTGGTGAGGGTACAATTATCAAGGCTATCTCTGAAGCTTTT 779
||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct 822 GAAGGTGTAGAATTGGGAATTGGTGAGAGTACAATTATCAAGGCTATCTCTGAGGCTTTT 881
Query 780 GGTAGAACTGAGGATCATGTTAAGAAGCAAAATACGGAACTGGGAGACTTGGGGCTTGTT 839
||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 882 GGTAGAACTGAGGATCATGTTAAGAAGCAGAATACGGAACTGGGAGACTTGGGACTTGTA 941
Query 840 GCAAAAGGAAGCCGTTCAACTCAGACTATGATGTTCAAGCCCGAACCATTGACTGTTGTC 899
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 942 GCAAAAGGAAGCCGTTCGACTCAGACTATGATGTTCAAGCCCGAACCATTGACTGTTGTC 1001
Query 900 AAGGTGTTCGATACGTTTCGACAAATTGCTAAGGAAAGTGGAAAAGATAGCAATGAAAAG 959
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1002 AAGGTTTTCGATACGTTTCGACAAATTGCTAAGGAAAGTGGAAAAGATAGTAATGAAAAG 1061
Query 960 AAGAAGAATCGAATGAAGGCACTTCTTGTGGCAACAACAGACTGTGAACCACTTTACTTA 1019
|||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct 1062 AAGAAGAATCGAATGAAGGCACTTCTTGTGGCGACAACAGACTGTGAACCTCTTTACTTA 1121
Query 1020 ACACGTTTACTTCAGGCAAAATTGCGGTTAGGGTTCTCAGGTCAGACTGTCTTAGCTGCC 1079
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1122 ACACGATTACTTCAGGCAAAATTGCGGTTAGGGTTCTCAGGTCAGACTGTCTTAGCCGCA 1181
Query 1080 TTGGGACAAGCTGCTGTATATAATGAAGAGCACTCAAAGCCACCCCCAAATACCAAGTCT 1139
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1182 TTGGGACAAGCCGCTGTATATAATGAAGAGCACTCAAAGCCACCCCCAAATACCAAGTCT 1241
Query 1140 CCTTTAGAAGAGGCTGCGAAGATTGTTAAACAAGTATTTACGGTACTTCCTGTCTATGAC 1199
||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||
Sbjct 1242 CCTTTAGAAGAGGCTGCAAAGATTGTTAAACAAGTATTCACTGTACTTCCTGTCTATGAC 1301
Query 1200 ATTATTGTTCCTGCTCTTCTAACCGGTGGAGTGTGGAATCTTCCAAAAACTTGTAACTTT 1259
|||||||||||||||||||||| || || ||||||||||||||||||||||||||||||
Sbjct 1302 ATTATTGTTCCTGCTCTTCTAAGTGGCGGTGTGTGGAATCTTCCAAAAACTTGTAACTTT 1361
Query 1260 ACATTGGGTGTTCCAATTGGACCCATGCTTGCAAAACCAACCAAAGGTGTAGCAGAGATA 1319
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1362 ACATTGGGTGTTCCAATTGGACCCATGCTTGCAAAACCAACCAAAGGTGTAGCTGAGATA 1421
Query 1320 CTGAATAAATTTCAGGACATCGTTTTCACATGCGAATACAAATATGATGGGGAACGTGCA 1379
||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1422 CTGAATAAATTCCAGGACATCGTTTTCACATGTGAATACAAATATGATGGGGAACGTGCA 1481
Query 1380 CAGATACATTTTTTGGAAGATGGTACATTTGAGATATATAGTCGAAATGCTGAAAGAAAC 1439
|||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct 1482 CAGATACATTTTATGGAGGATGGTACATTTGAGATATACAGTCGAAATGCTGAAAGAAAC 1541
Query 1440 ACTGGGAAGTACCCGGATGTTGCTCTTGCATTATCAAGATTAAAGAAGCCCTCTGTGAAA 1499
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct 1542 ACTGGGAAGTACCCGGATGTTGCTCTTGCGTTATCAAGATTAAAGAAGCCTTCTGTGAAA 1601
Query 1500 TCTTTTATTCTGGATTGTGAGGTTGTTGCTTTCGACAGGGAGAAAAAGAAAATTCTTCCG 1559
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1602 TCTTTTATTCTGGATTGTGAAGTTGTTGCTTTCGACAGGGAGAAAAAGAAAATTCTTCCG 1661
Query 1560 TTCCAGATTTTGAGCACTCGAGCCCGTAAAAATGTGAATGTCAATGATATCAAGGTTGGC 1619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1662 TTCCAGATTTTGAGCACTCGAGCCCGTAAAAATGTGAATGTCAATGATATCAAGGTTGGC 1721
Query 1620 GTATGCATCTTTGCTTTTGACATGTTATATCTAAATGGCCAACAACTTATCCAAGAGAAT 1679
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1722 GTATGCATCTTTGCTTTTGACATGTTATATCTAAATGGCCAACAACTTATCCAGGAGAAT 1781
Query 1680 CTTAATATTCGCCGAGAGAAGCTATACGAATCATTTGAAGAAGATCCTGGGTATTTCCAG 1739
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1782 CTTAAAATTCGCCGAGAGAAGCTATACGAATCATTTGAGGAAGATCCTGGGTATTTCCAG 1841
Query 1740 TTTGCAACTGCTCTAACATCTAGCGATATCGATGAAATCCAGAAGTTTCTTGACGCTTCT 1799
|||||||||||| ||||||||| ||||||||||||||| || ||||||||||||||||||
Sbjct 1842 TTTGCAACTGCTGTAACATCTAACGATATCGATGAAATACAAAAGTTTCTTGACGCTTCT 1901
Query 1800 GTTGATGTTGGCTGTGAAGGTTTAATCATTAAAACATTGAACTCGGATGCTACCTATGAG 1859
|||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||
Sbjct 1902 GTTGATGTTGGCTGCGAAGGTTTAATCATTAAAACATTGGACTCAGATGCTACCTATGAG 1961
Query 1860 CCTGCCAAGCGATCGAATAATTGGCTAAAACTGAAGAAAGACTATATGGACAGCATTGGG 1919
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1962 CCTGCAAAGCGATCAAATAATTGGCTAAAACTGAAGAAAGACTATATGGACAGCATTGGG 2021
Query 1920 GACTCAATGGATCTTGTACCAATTGCTGCTTTCCATGGACGTGGCAAACGCACAGGTGTC 1979
||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2022 GACTCTGTGGATCTTGTACCAATTGCTGCTTTCCATGGACGTGGAAAACGCACAGGTGTC 2081
Query 1980 TATGGTGCATTTTTACTCGCTTGCTATGATGTTGATAAGGAAGAGTTTCAGAGCATTTGT 2039
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2082 TATGGTGCATTTTTACTCGCTTGCTATGATGTTGATAAGGAAGAGTTCCAGAGCATTTGT 2141
Query 2040 AAAATCGGTACTGGATTTTCTGATGCCATGCTTGACGAACGGTCGTCCAGTCTTCGCTCT 2099
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2142 AAAATTGGTACTGGATTTTCTGATGCCATGCTTGACGAGCGGTCGTCCAGTCTTCGCTCT 2201
Query 2100 CAAGTGATTGCTACTCCAAAACAATACTACCGAGTTGGAGACAGCCTCAATCCAGATGTT 2159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2202 CAAGTGATTGCTACTCCAAAACAATACTACCGAGTTGGAGACAGCCTCAATCCAGATGTT 2261
Query 2160 TGGTTTGAGCCCACTGAGGTCTGGGAAGTGAAAGCAGCTGACTTGACAATTAGCCCTGTG 2219
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2262 TGGTTTGAGCCCACTGAGGTCTGGGAAGTGAAAGCAGCTGACTTAACAATTAGCCCTGTG 2321
Query 2220 CACCGTGCAGCTACCGGCATTGTGGATCCTGATAAGGGAATTTCTCTTCGTTTTCCTCGT 2279
|||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 2322 CACCGTGCAGCTACTGGCATAGTGGATCCTGATAAGGGGATTTCTCTTCGTTTTCCTCGT 2381
Query 2280 CTACTTCGTGTACGGGAAGACAAAAAGCCAGAGGATGCAACATCATCTGAGCAGATTGCT 2339
||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||
Sbjct 2382 CTACTTCGTGTACGGGAAGACAAGAAGCCCGAGGAAGCAACATCATCTGAGCAGATTGCT 2441
Query 2340 GATATGTACCAAGCTCAGAAACACAATCATCCAAGTAATGAAGTCAAAGGTGACGACGAT 2399
||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2442 GATTTGTACCAAGCTCAGAAACACAATCATCCAAGTAATGAAGTCAAAGGTGACGATGAT 2501
Query 2400 TGAACAACTGTAATCTGGTCTCA 2422
|||||||| ||||||||| ||||
Sbjct 2502 TGAACAACAGTAATCTGGCCTCA 2524
> AT1G49250.1 | Symbols: | ATP-dependent DNA ligase | chr1:18220533-18224256
FORWARD LENGTH=1974
Length=1974
Score = 1868 bits (1011), Expect = 0.0
Identities = 1569/1835 (86%), Gaps = 51/1835 (3%)
Strand=Plus/Plus
Query 592 CAAATGAAAGTGGGC-GAATTGTGATTACTGATATTCTGTGTAACATGTTGAGAACCGTT 650
||| ||||||| ||| | ||||| || ||| |||||||||||||||||||||||||||||
Sbjct 167 CAACTGAAAGT-GGCAGGATTGTCATCACTCATATTCTGTGTAACATGTTGAGAACCGTT 225
Query 651 ATTGCCACCACTCCTGAGGATTTGGTTGCTACTGTTTACCTTGCGGCAAATGAGATTGCC 710
|| ||||| |||||||| |||||| | |||||||||| ||||| |||||||||||||||
Sbjct 226 ATCGCCACTACTCCTGATGATTTGCTACCTACTGTTTATCTTGCTGCAAATGAGATTGCC 285
Query 711 CCTGCTCATGAAGGT-GTAGAATTGGGAATTGGTGAGGG-TAC-A-ATTATCAAGGCTAT 766
||||||||||||||| || |||||||||| ||| |||| | | | ||||| ||||| ||
Sbjct 286 CCTGCTCATGAAGGTATTA-AATTGGGAATGGGTAAGGGTTCCTACATTATTAAGGCAAT 344
Query 767 CTCTGAAGCTTTTGGTAGAACTGAGGATCATGTTAAGAAGCAAAATACGGAACTGGGAGA 826
||||||||||||||||||||||||| || ||| || ||||| ||||| ||||||||||
Sbjct 345 CTCTGAAGCTTTTGGTAGAACTGAGTCCCACGTTGAGCAGCAATATACGCAACTGGGAGA 404
Query 827 CTTGGGGCTTGTTGCAAAAGGAAGCCGTTCAACTCAGACTATGATGTTCAAGCCCGAACC 886
|||||||||||| ||||| || |||||||| ||||||||||||| |||| |||| ||||
Sbjct 405 CTTGGGGCTTGTAGCAAATGGGAGCCGTTCCTCTCAGACTATGATTTTCATGCCCAAACC 464
Query 887 ATTGACTGTTGTCAAGG-TGTTCGATACGTTTCGACAAATTGCTAAGGAAAGTGGAAAAG 945
||| ||||||||||||| || | ||||| |||| | ||||||||||||| ||||||||
Sbjct 465 ATTAACTGTTGTCAAGGTTGCT-GATACACTTCGCCTAATTGCTAAGGAATCTGGAAAAG 523
Query 946 ATAGCAATGAAAAGAAGAAGAATCGAATGAAGGCACTTCTTGTGGCAACAACAGACTGTG 1005
||| || || ||||||||| ||| |||||||||||||||||||||||| ||||| ||||
Sbjct 524 GTAGTAAGGATAAGAAGAAGGATCTAATGAAGGCACTTCTTGTGGCAACTACAGATTGTG 583
Query 1006 AACCACTTTACTTAACACGTTTACTTCAGGCA-AAATTGCGGTTAGGGTTCTCAGGTCAG 1064
|||| ||||||||||| ||||||||||||| | || |||||||||||||||||| ||||
Sbjct 584 AACCTCTTTACTTAACTCGTTTACTTCAGG-ATAATTTGCGGTTAGGGTTCTCACGTCAA 642
Query 1065 ACTGTCTTAGCTGCCTTGGGACAAGCTGCTGTATATAATGAAGAGCACTCAAAGCCACCC 1124
||||| ||||||||||||||||| |||||||||||||| |||||||| || ||||| |||
Sbjct 643 ACTGTTTTAGCTGCCTTGGGACAGGCTGCTGTATATAACGAAGAGCATTCTAAGCCGCCC 702
Query 1125 CCAAATACCAAGTCTCCTTTAGAAGAGGCTGCGAA-GATTGTTAAACAAGTATT-TACGG 1182
||||||| |||| ||||||||| |||||||| || |||||||||| ||||||| | |
Sbjct 703 CCAAATATCAAGAATCCTTTAGATGAGGCTGC-AACGATTGTTAAAGAAGTATTCT-CAA 760
Query 1183 TACTTCCTGTCTATGACATTATTGTTCCTGCTCTTCTAACCGGTGGAGTGTGGAATCTTC 1242
| |||||||||||||||||||||||| |||||||||||| |||| || ||||||||||
Sbjct 761 TGCTTCCTGTCTATGACATTATTGTTGGTGCTCTTCTAACTAGTGGTGTATGGAATCTTC 820
Query 1243 CAAAAACTTGTAACTTTACATTGGGTGTTCCAATT-GGACCCATGCTTGCAAAACCAACC 1301
| |||||||||||| | ||| | ||||||||| || || ||||||||||||||| ||||
Sbjct 821 CTAAAACTTGTAACCTCACACTCGGTGTTCCAGTTAGG-CCCATGCTTGCAAAAGCAACT 879
Query 1302 A-AAGGTGTAGCA-GAGATAC-TGAATAAATTTC-AGGACATC-GTTTTCACATGC-GAA 1355
| || | |||| | |||| || | ||| ||| |||||| | ||||||||| || |||
Sbjct 880 ACAA-GAGTAG-ATCTCATACTTG-AGAAA-TTCAAGGACA-CTGTTTTCACA-GCTGAA 933
Query 1356 TACAAATATGATGGGGAACGTGCACAGATACATTTTTTGGAAGATGGTACATTTGAGATA 1415
|||||||||||||| ||||||||||||||| ||| | |||| ||||||||| | ||||||
Sbjct 934 TACAAATATGATGGTGAACGTGCACAGATATATTATATGGAGGATGGTACAGTCGAGATA 993
Query 1416 TAT-AGTCGAAATGCTGAAAGAAACACTGGGAAGTACCCGGATGTTGCTCTTGCATTATC 1474
| | ||| || ||||||||||||||||||| |||||||| ||||||||||||| |||||
Sbjct 994 T-TCAGTAGACATGCTGAAAGAAACACTGGCAAGTACCCTGATGTTGCTCTTGTGTTATC 1052
Query 1475 AAGATTAAAGAAGCCCTCTGTGAAATCTTTTATTCTGGATTGTGAGGTTGTTGCTTTCGA 1534
||| |||||||||||| ||||||||||||||||||||||||| |||||||| | ||| |
Sbjct 1053 AAGGTTAAAGAAGCCCACTGTGAAATCTTTTATTCTGGATTGCGAGGTTGTCACCTTCAA 1112
Query 1535 CAGGGAGAAAA-AGAAAATTCTTCCGTTCCAGATTTTGAGCACTCGAGCCCGTAAAAATG 1593
||| || |||| ||||||||||||| |||||| | | || ||||||| ||||||||
Sbjct 1113 CAGAGA-AAAAGAGAAAATTCTTCCACTCCAGA--GT-A-CA--CGAGCCCATAAAAATG 1165
Query 1594 TGAATGTCAATGATATCAAGGTTGGCGTATGCATCTTTGCTTTTGACATGTTATATCTAA 1653
||||||||| |||||||||||||||||||||| ||||||||||||| || ||||| ||||
Sbjct 1166 TGAATGTCAGTGATATCAAGGTTGGCGTATGCGTCTTTGCTTTTGATATATTATACCTAA 1225
Query 1654 ATGGCCAACAACTTATCCAAGAGAATCTTAATATTCGCCGAGAGAAGCTATACGAATCAT 1713
||||||||| ||||||||| |||||||| || |||||||||||||||||| |||| ||||
Sbjct 1226 ATGGCCAACTACTTATCCATGAGAATCTGAACATTCGCCGAGAGAAGCTACACGATTCAT 1285
Query 1714 TTGAAGAAGATCCTGGGTATTTCCAGTTTGCAACTGCTCTAACATCTAGCGATATCGATG 1773
|||| ||||||| ||||||||||||||||||||||||||||||||| | |||||| | ||
Sbjct 1286 TTGAGGAAGATCTTGGGTATTTCCAGTTTGCAACTGCTCTAACATCCAACGATATTGGTG 1345
Query 1774 AAATCCA-GAAGTTTCTTGACGCTTCTGTTGATGTTGGCTGTGAAGGTTTAATCATTAAA 1832
|| | || || ||||||| | |||||| |||| | || |||||||||||||| || |||
Sbjct 1346 AATTACAAGA-GTTTCTTAAAGCTTCTATTGACATAGGATGTGAAGGTTTAATGAT-AAA 1403
Query 1833 A-CATTGAACTCGGATGCTACCTATGAGCCTGCCAAGCGATCGAATAATTGGCTAAAACT 1891
||||| |||| |||| |||||||||||||| ||| |||| |||||||||||||||||
Sbjct 1404 GTCATTGTACTCAAATGCAACCTATGAGCCTGCAAAGAGATCAAATAATTGGCTAAAACT 1463
Query 1892 GAAGAAAGACTATATGGACAGCATTGGGGACTCAATGGATCTTGTACCAATTGCTGCTTT 1951
|||||| ||||||||||||| |||||| || || |||||||||||||||| ||| | ||
Sbjct 1464 GAAGAAGGACTATATGGACAACATTGGAGATTCCGTGGATCTTGTACCAATAGCTACGTT 1523
Query 1952 CCATGGACGTGGCAAACGCACAGGTGTCTATGGTGCATTTTTACTCGCTTGCTATGATGT 2011
|||||||||||| |||||||||||| ||| |||||||| |||||| || ||||| |||||
Sbjct 1524 CCATGGACGTGGGAAACGCACAGGTTTCTTTGGTGCATATTTACTAGCGTGCTACGATGT 1583
Query 2012 TGATAAGGAAGAGTTTCAGAGCATTTGTAAAATCGGTACTGGATTTTCTGATGCC-ATGC 2070
|||||||||||| || ||||||||||||||||| ||||||| ||||||||||| | ||
Sbjct 1584 TGATAAGGAAGAATTCCAGAGCATTTGTAAAATTGGTACTGAATTTTCTGATGTGGA-GC 1642
Query 2071 TTGACGAACGGTCGTCCAGTCTTCGCTCTCAAGTGATTGCTACTCCAAAACAATACTACC 2130
|| | || ||| ||||||||| ||||| |||||||||||||||| |||||||||||||
Sbjct 1643 TTCAAGATTTGTCTTCCAGTCTTTGCTCTAAAGTGATTGCTACTCCGAAACAATACTACC 1702
Query 2131 GAGTTGGAGA-C-AGCCTCAATCCAGATGTTTGGTTTGAGCCCACTGAGGTCTGGGAAGT 2188
||| | | | | | | ||||||||||||| ||||| |||||||| ||||| ||||||||
Sbjct 1703 AAGTCG-ATAACGATC-TCAATCCAGATGTCTGGTTGGAGCCCACCGAGGTGTGGGAAGT 1760
Query 2189 GAAAGCAGCTGACTTGACAATTAGCCCTGTGCACCGTGCAGCTACCGGCATTGTGGATCC 2248
||||||||||||||||||| |||||||||| | |||| ||||| || |||||||| ||
Sbjct 1761 GAAAGCAGCTGACTTGACAGTTAGCCCTGTATATCGTGAAGCTATTGGAATTGTGGACCC 1820
Query 2249 TGATAAGGGAATTTCTCTTCGTTTTCCTCGTCTACTTCGTGTACGGGAAGACAAAAAGCC 2308
||| |||||||||||||| || |||||||||||| | ||| ||||| ||||||| || ||
Sbjct 1821 TGACAAGGGAATTTCTCTACGATTTCCTCGTCTAGTCCGTATACGGAAAGACAAGAATCC 1880
Query 2309 AGAGGATGCAACATCATCTGAGCAGATTGCTGATATGTACCAAGCTCAGAAACACAATCA 2368
|||||| |||||| ||||||| ||||||||||| ||||| ||||||||||||||||||||
Sbjct 1881 AGAGGAAGCAACAACATCTGACCAGATTGCTGAAATGTATCAAGCTCAGAAACACAATCA 1940
Query 2369 TCCAAGTAATGAAGTCAAAGGTG-ACGACGATTGA 2402
||||| ||| ||| ||||| || |||||||||||
Sbjct 1941 ACCAAGCAATCAAGGCAAAG-TGGACGACGATTGA 1974
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 120280505820
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5