BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg919587
Length=1514
Score E
Sequences producing significant alignments: (Bits) Value
AT1G08430.1 | Symbols: ALMT1, ATALMT1 | aluminum-activated mala... 2193 0.0
AT1G08440.1 | Symbols: | Aluminium activated malate transporte... 1458 0.0
> AT1G08430.1 | Symbols: ALMT1, ATALMT1 | aluminum-activated malate
transporter 1 | chr1:2658716-2661029 FORWARD LENGTH=1566
Length=1566
Score = 2193 bits (1187), Expect = 0.0
Identities = 1357/1436 (94%), Gaps = 24/1436 (2%)
Strand=Plus/Plus
Query 1 GAGTGATCATCAGGAGGTGTTATGGAGAAAGTGAGAGAGATAGTGAGAGAAGGGATAAGA 60
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 64 GAGTGACCATCAAAAGGTGTTATGGAGAAAGTGAGAGAGATAGTGAGAGAAGGGATTAGA 123
Query 61 GTAGGGAATGAAGACCCGAGAAGAATAATTCATGCTTTCAAAGTGGGACTTGCTCTTGTT 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 124 GTAGGGAATGAAGACCCGAGAAGAATTATTCATGCTTTCAAAGTGGGACTTGCTCTTGTT 183
Query 121 TTCGTCTCTTCCTTCTATTATTACCAACCTTTCGGTCCTTTCACCGATTACTTCGGTATC 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 184 TTGGTCTCTTCCTTCTATTATTACCAACCTTTCGGTCCTTTCACCGATTACTTCGGTATC 243
Query 181 AATGCAATGTGGGCTGTCATGACCGTCGTTGTTGTCTTTGAATTCTCCGTAGGGGCCACA 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 244 AATGCAATGTGGGCTGTCATGACCGTCGTTGTTGTCTTTGAATTCTCCGTAGGGGCTACA 303
Query 241 CTTGGGAAAGGACTAAATAGAGGAGTGGCAACATTAGTAGCAGGAGGACTAGGAATTGGA 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 304 CTTGGGAAAGGACTAAATAGAGGAGTGGCAACATTAGTAGCAGGAGGACTAGGAATTGGA 363
Query 301 GCTCATCGACTAGCAAGATTGTCGGGTGCAACAGTGGAACCTATTCTTTTGGTCATGTTG 360
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 364 GCTCATCAACTAGCAAGATTGTCGGGTGCAACAGTGGAACCTATTCTTTTGGTCATGTTG 423
Query 361 GTCTTTGTGCAAGCTGCCTTGTCGACGTTTGTGAGGTTCTTCCCATGGGTGAAGACAAAA 420
||||||||||||||||| ||||||||||| || ||||| ||||||||||| ||||||||
Sbjct 424 GTCTTTGTGCAAGCTGCGTTGTCGACGTTCGTAAGGTTTTTCCCATGGGTAAAGACAAAG 483
Query 421 TTCGATTATGGGATATTGATATTCATATTGACGTTCGCGTTGATATCGTTGTCGGGGTTT 480
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 484 TTCGATTATGGGATATTGATATTCATATTGACGTTCGCGCTGATATCGTTGTCGGGGTTT 543
Query 481 AGAGACGAAGAGATAATGGATTTGGCAGAAAGCAGACTTTCAACAGTGGTGATTGGAGGA 540
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 544 AGAGACGAAGAGATAATGGATTTGGCAGAAAGCAGACTATCGACAGTGGTGATTGGAGGA 603
Query 541 GTCAGTTGCGTCCTTATCTCTATCTTTGTCTGTCCTGTTTGGGCTGGACAAGATCTTCAT 600
||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 604 GTCAGTTGCATCCTTATCTCTATCTTTGTCTGTCCTGTTTGGGCTGGACAAGATCTACAT 663
Query 601 TCTCTCCTTGCCTCTAACTTTGACACACTCTCCCACTTCCTTCAAGATTTTGGGGACGAA 660
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 664 TCTCTCCTTGCCTCTAACTTTGACACTCTCTCCCACTTCCTTCAAGATTTTGGGGACGAA 723
Query 661 TATTTTGAAGCGAGTGAAGATGGGG-ACTATAAAGTGGTGGAGAAGAGGAAAAAGAATCT 719
|||||||||||||| || || |||| |||| ||||| |||||||||||||||||||||||
Sbjct 724 TATTTTGAAGCGAGAGA-GAAGGGGGACTACAAAGTAGTGGAGAAGAGGAAAAAGAATCT 782
Query 720 TG-GAAGATACAAAAGGGTTCTTGACTCCAAAAGCGATGAAGAAGCTTTGGCTAATTTCG 778
|| || |||| ||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct 783 TGAGA-GATATAAAAGTGTTCTTGACTCCAAAAGCGATGAAGAAGCTTTGGCTAATTACG 841
Query 779 CAGAATGGGAACCGCCGCATGGACAATTTAGGTTTAGGCATCCATGGAAACAATATGTTG 838
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 842 CAGAATGGGAACCGCCTCATGGACAATTTAGGTTTAGGCATCCATGGAAACAATATGTTG 901
Query 839 CCGTTGGCGCATTACTCCGGCAGTGTGCCTACAGGATTGATGCCTTGAATTCATACATCA 898
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 902 CCGTTGGTGCATTACTCCGGCAGTGTGCCTACAGGATTGATGCCTTGAATTCATACATCA 961
Query 899 ACTCAGATTTTCAGATCCCAATGGACATAAAAAAGAAATTAGAAACACCATTAAGAAGAA 958
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 962 ACTCAGATTTTCAGATCCCAGTGGACATAAAAAAGAAATTAGAAACACCATTAAGAAGAA 1021
Query 959 TGAGCTCGGAGTCGGGAAAATCAATGAAAGAAATGTCGATTTCATTAAAGA-AAATGATA 1017
|||||||||| |||||||| ||||||||||||||||| |||||| |||| | ||||||||
Sbjct 1022 TGAGCTCGGAATCGGGAAACTCAATGAAAGAAATGTCCATTTCACTAAA-ACAAATGATA 1080
Query 1018 AAATCATCTTCTTCTGATATCCATGTCTCAAACTCACAATCTGCATGCAAAGCTCTTTCT 1077
||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 1081 AAATCATCTTCTTCTGATATCCATGTCTCAAACTCACAAGCTGCATGCAAATCTCTTTCT 1140
Query 1078 ACTTTACTTAAATCAGGCATCTTGAACGATGTTGAGCCTCTTCAAATGATTTCATTGCTC 1137
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct 1141 ACTTTACTTAAATCAGGCATCTTGAACGATGTTGAGCCTCTTCAAATGATCTCATTGATG 1200
Query 1138 ACGACTGTCTCCCTACTCATAGATATTGTTAATTTAACCGAAAAAATCTCAGAATCCGTA 1197
|||||||||||| | ||||||||||||||||| ||||||||||| ||||| ||||| |||
Sbjct 1201 ACGACTGTCTCCATGCTCATAGATATTGTTAACTTAACCGAAAAGATCTCGGAATCTGTA 1260
Query 1198 CACGAGCTTGCATCCGCTGCAAGATTTAAGAACAAGATGAGGCCGACGGTGCTATTTGAG 1257
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct 1261 CACGAGCTTGCATCCGCTGCAAGATTTAAGAACAAGATGAGGCCGACCGTGCTATACGAG 1320
Query 1258 AAGTCGGATTCTGGAAGAATTGGTCGTGCCATGCCAGTAGAATCTCATGAAGATGATCAT 1317
||||||||||| ||||| |||||||||||||||||| |||| |||||||||||| |||||
Sbjct 1321 AAGTCGGATTCCGGAAGCATTGGTCGTGCCATGCCAATAGATTCTCATGAAGATCATCAT 1380
Query 1318 GTTGTCACAGTTTTACATGACGTTGATAA--AT----CAAACAAT-TCG------C--GT 1362
||||||||||||||||||||||||||||| || |||||||| | | | ||
Sbjct 1381 GTTGTCACAGTTTTACATGACGTTGATAATGATAGATCAAACAATGTTGATGATTCACGT 1440
Query 1363 GGAGAGAGTTCACAGGACTCATGTCATCATCATGTTGCCATAAAGATTGTTGATGA 1418
|||| ||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1441 GGAGGGAGTTCACAGGACTCATGTCATCAT---GTTGCCATAAAGATTGTTGATGA 1493
Score = 69.4 bits (37), Expect = 9e-11
Identities = 37/37 (100%), Gaps = 0/37 (0%)
Strand=Plus/Plus
Query 1415 ATGAAAAACATGAAGATGGTGAAATACATGTACATAC 1451
|||||||||||||||||||||||||||||||||||||
Sbjct 1505 ATGAAAAACATGAAGATGGTGAAATACATGTACATAC 1541
> AT1G08440.1 | Symbols: | Aluminium activated malate transporter
family protein | chr1:2663027-2665343 FORWARD LENGTH=1506
Length=1506
Score = 1458 bits (789), Expect = 0.0
Identities = 1172/1351 (87%), Gaps = 50/1351 (4%)
Strand=Plus/Plus
Query 22 ATGGAGAAAGTGAGAGAGATAGTGAGAGAAGGGATAAGAGTAGGGAATGAAGACCCGAGA 81
|||||||||||||||||||| ||||||||||||| |||||||| || ||||| ||||||
Sbjct 1 ATGGAGAAAGTGAGAGAGATTGTGAGAGAAGGGAGGAGAGTAGGTAAAGAAGATCCGAGA 60
Query 82 AGAATAATTCATGCTTTCAAAGTGGGACTTGCTCTTGTTTTCGTCTCTTCCTTCTATTAT 141
||| || | |||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct 61 AGAGTAGTGCATGCTTTCAAAGTGGGACTTGCTCTTGCTTTGGTCTCTTCCTTCTATTAT 120
Query 142 TACCAACCTTTCGGTCCTTTCACCGATTACTTCGGTATCAATGCAATGTGGGCTGTCATG 201
|| ||||| || | | | | ||| |||||||| |||||||||||||||||||||||
Sbjct 121 TATCAACC--TC--T-C--T-A-CGACAACTTCGGTGTCAATGCAATGTGGGCTGTCATG 171
Query 202 ACCGTCGTTGTTGTCTTTGAATTCTCCGTAGGGGCCACACTTGGGAAAGGACTAAATAGA 261
|||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 172 ACCGTCGTTGTTGTTTTTGAATTCTCTGTAGGGGCCACACTTGGGAAAGGACTAAATAGA 231
Query 262 GGAGTGGCAACATTAGTAGCAGGAGGACTAGGAATTGGAGCTCATCGAC-TAGCAAGATT 320
| |||||||||||| ||||||||||||||||| ||||||||||||| || ||||||| ||
Sbjct 232 GCAGTGGCAACATTGGTAGCAGGAGGACTAGGGATTGGAGCTCATC-ACCTAGCAAGTTT 290
Query 321 GTCGGGTGCAACAGTGGAACCTATTCTT-TTGGTCATGTTGGTCTTTGTGCAAGCTGCCT 379
||||||| ||||||| ||||| |||||| ||| ||| || |||||||| | |||||| |
Sbjct 291 GTCGGGTCCAACAGTAGAACCCATTCTTCTTGC-CATCTTTGTCTTTGTCCTAGCTGCAT 349
Query 380 TGTCGACGTTTGTGAGGTTCTTCCCATGGGTGAAGACAAAAT-TCGATTATGGGATATTG 438
|||||||||| |||||||||||||| |||||||| ||| || | ||||||||| |||||
Sbjct 350 TGTCGACGTTCGTGAGGTTCTTCCCGCGGGTGAAGGCAAGATAT-GATTATGGGGTATTG 408
Query 439 ATATTCATATTGACGTTCGCGTTGATATC-GTTGTCGGGGTTTAGAGACGAAGAGATAAT 497
|||||||||||||||||||| ||||||| ||| |||||||||||||| || |||||| |
Sbjct 409 ATATTCATATTGACGTTCGCACTGATATCAGTT-TCGGGGTTTAGAGAGGACGAGATATT 467
Query 498 GGATTTGGCAG-A-AAGCAGACTTTCAACAGTGGTGATTGGAGGAGTCAGTTGCGTCCTT 555
||||||||| | | ||| ||||| || |||||| | || |||||||| |||||||| |||
Sbjct 468 GGATTTGGC-GCATAAG-AGACTATCGACAGTGATAATGGGAGGAGTTAGTTGCGTGCTT 525
Query 556 ATCTCTATCTTTGTCTGTCCTGTTTGGGCTGGACAAGATCTTCATTCTCTCCTTGCCTCT 615
||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||
Sbjct 526 ATCTCTATCTTTGTCTGCCCTGTTTGGGCAGGACAAGACCTTCATTCTCTCCTTGCCTCC 585
Query 616 AACTTTGACACACTCTCCCACTTCCTTCAAGATTTTGGGGACGAATATTTTGAAGCGAGT 675
||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 586 AACTTTGACACTCTCTCCCACTTCCTTCAAGAATTTGGGGACGAATATTTTGAAGCGACA 645
Query 676 GAAGATGGGGACTAT-AAAGTGGTGGAGAAGAGGAAAAAGAATCTTG-GAAGATACAAAA 733
|| ||||||||| || |||| ||||||||||||| || |||||||| || |||| ||||
Sbjct 646 GAGGATGGGGAC-ATCAAAGAAGTGGAGAAGAGGAGAAGGAATCTTGAGA-GATATAAAA 703
Query 734 GGGTTCTTGACTCCAAAAGCGATGAAGAAGCTTTGGCTAATTTCGCAGAATGGGAACCGC 793
| ||||| |||| |||||| |||||||||||||||||||||| ||| ||||||||||||
Sbjct 704 GTGTTCTCAACTCAAAAAGCAATGAAGAAGCTTTGGCTAATTTTGCAAAATGGGAACCGC 763
Query 794 CG-CATGGACAATTTAGGTTTAGGCATCCATGGAAACAATATGTTGCCGTTGGCGCATTA 852
| ||||| |||||||| ||| |||||||||||| ||||||| ||||||| || ||||||
Sbjct 764 -GTCATGGCCAATTTAGATTTCGGCATCCATGGAGACAATATCTTGCCGTGGGTGCATTA 822
Query 853 CTCCGGCAGTGTGCCTACAGGATTGATGCCTTGAATTCATACATCAACTCAGATTTTCAG 912
|||||||| | ||| ||| | |||||||||||||||||| |||||||||||||| | |||
Sbjct 823 CTCCGGCAATCTGCTTACCGAATTGATGCCTTGAATTCAAACATCAACTCAGATATGCAG 882
Query 913 ATCCCAATGGACATAAAAAAGAAATTAGAA-ACACCATTAAGAAGAATGAGCTCGGAGTC 971
|||||||||||||| ||||||||| |||| | |||||||||||||||||||||||||||
Sbjct 883 ATCCCAATGGACATTAAAAAGAAAATAGAGGA-ACCATTAAGAAGAATGAGCTCGGAGTC 941
Query 972 GGGAAAATCAATGAAAGAAATGTCGATTTCATTAAAGAAAATGATAAAATCATCTTCTTC 1031
||| || |||||||||||| |||| |||||||||||||| |||| || |||||||||||
Sbjct 942 GGGGAAGTCAATGAAAGAAGTGTCCATTTCATTAAAGAACATGACAATATCATCTTCTTT 1001
Query 1032 TGATATCCATGTC-TCAAACTCACAATCTGCATGCAA-AGCTCTTTCTACTTTACTTAAA 1089
|||||||||||| | ||||||||||||||||||||| | ||||||| ||||||||||||
Sbjct 1002 TGATATCCATGTAGT-AAACTCACAATCTGCATGCAAGA-CTCTTTCCACTTTACTTAAA 1059
Query 1090 TCAGGCATCTTGAACGATGTTGAGCCTCTTCAAATGATTTCATTGCTCACGACTGTCTCC 1149
||||||||||| ||||||||||||||||| |||||||| ||||| | ||||| || ||
Sbjct 1060 TCAGGCATCTTAAACGATGTTGAGCCTCTACAAATGATCTCATTAATGACGACAGTTTCT 1119
Query 1150 CTACTCATAGATATTGTTAATTTAACCGAAAAAATCTCAGAATCCGTACACGAGCTTGCA 1209
|| ||||| || ||||| || ||||||||||| ||||||||||||||||| |||||||||
Sbjct 1120 CTGCTCATTGACATTGTAAACTTAACCGAAAAGATCTCAGAATCCGTACATGAGCTTGCA 1179
Query 1210 TCCGCTGCAAGATTTAAGAACAAGATGAGGCCGACGGTGCTATTTGAGAAGTCGGATTCT 1269
||||| |||| |||||||||||||| || |||| | ||| || ||| ||||
Sbjct 1180 TCCGCAGCAAAATTTAAGAACAAGAAGAAGCCG----T-CTA----AG---TCGAATTCG 1227
Query 1270 GGAAGAATTGGTCGTGCCATGCCAG-TAGAATCTCATGA--A-GATGATCATGTTGTCAC 1325
||||| ||||||| ||||||||| || |||||||||| | |||||||||||||| ||
Sbjct 1228 GGAAGCATTGGTCAAGCCATGCCAAATA-AATCTCATGATGATGATGATCATGTTGTTAC 1286
Query 1326 AGTTTTACATGACGTTGATAAATCAAACAAT 1356
| ||||| ||||||||| | ||||||||||
Sbjct 1287 AATTTTAGGTGACGTTGACACATCAAACAAT 1317
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 74698410960
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5