BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg919651 Length=460 Score E Sequences producing significant alignments: (Bits) Value AT1G09030.1 | Symbols: NF-YB4 | nuclear factor Y, subunit B4 | ... 721 0.0 > AT1G09030.1 | Symbols: NF-YB4 | nuclear factor Y, subunit B4 | chr1:2908611-2909030 REVERSE LENGTH=420 Length=420 Score = 721 bits (390), Expect = 0.0 Identities = 410/420 (98%), Gaps = 0/420 (0%) Strand=Plus/Plus Query 21 ATGACAGACGAAGATAGATTGTTACCAATAGCCAATGTAGGGAGACTTATGAAGCAAATC 80 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1 ATGACAGACGAAGATAGATTGTTGCCAATAGCCAATGTAGGGAGACTTATGAAGCAAATC 60 Query 81 CTACCATCAAATGCAAAGATCTCAAAAGAAGCAAAACAAACAGTTCAAGAGTGTGCAACA 140 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 61 CTACCATCAAATGCAAAGATCTCAAAAGAAGCAAAACAAACAGTTCAAGAATGTGCAACA 120 Query 141 GAGTTCATAAGCTTTGTTACATGCGAAGCCTCGGACAAGTGCCACAGGGAGAATCGAAAG 200 ||||||||||||||||||||||||||||| || || |||||||||||||||||||| ||| Sbjct 121 GAGTTCATAAGCTTTGTTACATGCGAAGCATCAGAGAAGTGCCACAGGGAGAATCGGAAG 180 Query 201 ACGGTGAATGGAGACGACATCTGGTGGGCTCTCAGCACTCTCGGCCTCGATAACTATGCT 260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 ACGGTGAATGGAGACGACATCTGGTGGGCTCTCAGCACTCTCGGCCTCGATAACTATGCT 240 Query 261 GACGCCGTGGGTAGGCATCTTCACAAGTACCGTGAAGCCGAGCGAGAAAGAACTGAGCAC 320 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 241 GACGCCGTGGGTAGGCATCTTCACAAGTACCGTGAAGCCGAGAGAGAAAGAACTGAGCAC 300 Query 321 AACAAAGGTAGCAATGATAGTGGGAATGAGAAAGAACCCAACACTAGAAGTGATGTACAC 380 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 301 AACAAAGGTAGCAATGATAGTGGGAATGAGAAAGAAACCAACACTAGAAGTGATGTACAG 360 Query 381 AACCAATCGACAAAATTTATTAGAGTTGTTGAGAAGGGAAGCAGCTCCTCAGCCCGTTGA 440 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 361 AACCAATCGACAAAATTTATTAGAGTTGTTGAGAAGGGAAGCAGCTCCTCGGCCCGTTGA 420 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 21916738564 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5