BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg919805
Length=2048
Score E
Sequences producing significant alignments: (Bits) Value
AT1G10300.1 | Symbols: | Nucleolar GTP-binding protein | chr1:... 2976 0.0
AT1G50920.1 | Symbols: | Nucleolar GTP-binding protein | chr1:... 1515 0.0
> AT1G10300.1 | Symbols: | Nucleolar GTP-binding protein | chr1:3378142-3380226
FORWARD LENGTH=2064
Length=2064
Score = 2976 bits (1611), Expect = 0.0
Identities = 1903/2037 (93%), Gaps = 48/2037 (2%)
Strand=Plus/Plus
Query 1 CAGATTAGATAAGCAAAAACAATGGTGAAGTATAATTTCAAGAAGATAACAGTTGTGCCA 60
||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 67 CAGATTAAAGAAGCAAAAACAATGGTGAAATATAATTTCAAGAAGATAACAGTTGTGCCA 126
Query 61 AATGGAAAACAGTTTGTTGATATCGTTCTTTCCCGCACTCAGCGCCAGTCCA-AAACTGT 119
|| ||||||||||||||||||||||||||||||||||||||||| ||| || ||||||
Sbjct 127 AACGGAAAACAGTTTGTTGATATCGTTCTTTCCCGCACTCAGCGGCAG-ACACCAACTGT 185
Query 120 TATCCACAAGAGTGACAAGATCAGCAAACTCCGTAGCTTCTACATGATGAAAGTGAAGCT 179
| |||||||| |||||| ||| ||||||||||||||||||||||| |||||||||| |
Sbjct 186 TGTCCACAAGGGTGACAGGATTTGCAAACTCCGTAGCTTCTACATGCGGAAAGTGAAGTT 245
Query 180 CACACAATCAAACTTTAACGATAAGCTCTCTGCCATTATCCACGAGTTTCCTCGCCTCGA 239
|||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||| |
Sbjct 246 CACAGAATCAAACTTTAACGAGAAGCTCTCTGCCATTATCGACGAGTTTCCTCGCCTCAA 305
Query 240 TGAAATCCAACCCTTTTATGAATCTCTTCTTCATGTGCTTTACAATAAAGATCACTACAA 299
||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct 306 GGAAATTCAACCCTTCTATGAAGATCTTCTTCATGTGCTTTACAATAAAGATCACTACAA 365
Query 300 GCTCGCTCTTGGTCAAGTCAATACCGCCAAGAACAAGATCAGCAAAATCTCCGCGGATTA 359
|||||||||||||||||||||||| || ||||||||||||||||||||| || ||||||
Sbjct 366 GCTCGCTCTTGGTCAAGTCAATACTGCGAAGAACAAGATCAGCAAAATCGCCATGGATTA 425
Query 360 TGTGAAGCTACTCAAGCATGGTGATACTCTGTACCGGTGCAAGTGCTTAAAAGTGGCTGC 419
|||||||||| | |||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct 426 TGTGAAGCTATTGAAGCATGGTGATTCTCTGTACCGATGCAAGTGCTTAAAAGTGGCTGC 485
Query 420 TCTTGGGCGTATGTGTACTGTTATGAAAGGAATTGGTCCTAGTTTGGCTTATCTTGAGCA 479
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct 486 TCTTGGGCGTATGTGTACTGTTATGAAAGGTATTGGTCCTAGTTTGGCTTATCTTGAACA 545
Query 480 GGTTAGGCAACAC-TTGGCGAGGCTTCCTTCGATTGATCCAAACACTCGAACTCTCTTGA 538
||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||
Sbjct 546 GGTTAGGCAACACATT-GCAAGGCTTCCTTCGATTGATCCAAACACTCGAACTCTCTTGA 604
Query 539 TCTGTGGATGTCCTAATGTGGGAAAGAGTTCTTTTATGAACAAAGTTACAAGAGCTGATG 598
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 605 TCTGTGGATGTCCTAATGTGGGAAAGAGTTCTTTTATGAACAAAGTTACAAGAGCTGACG 664
Query 599 TGGATGTTCAGCCATATGCTTTCACTACAAAATCACTCTTTCTTGGTCATACTGATTACA 658
| | ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct 665 TAGCTGTTCAGCCATATGCTTTCACAACAAAGTCACTCTTTCTTGGTCATACTGATTACA 724
Query 659 AGTGTTTGAGGTATCAGGTGATTGATACACCGGGGCTTTTGGATAGGGAAATTGAAGACC 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 725 AGTGTTTGAGGTATCAGGTGATTGATACACCGGGGCTTTTGGATAGGGAAATTGAAGACC 784
Query 719 GTAATATCATTGAAATGTGTAGTATCACCGCATTGGCTCATCTTCGAGCTGCTGTTTTGT 778
|||||||||||||| ||||||| |||||||| ||||||||| | ||||||||||||||||
Sbjct 785 GTAATATCATTGAATTGTGTAGCATCACCGCGTTGGCTCATATCCGAGCTGCTGTTTTGT 844
Query 779 TCTTTCTTGATATTTCGGGTTCTTGTGGTTACACCATTGCTCAGCAGGCTTCTCTTTTTC 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 845 TCTTTCTTGATATTTCGGGTTCTTGTGGTTACACCATTGCTCAGCAGGCTTCTCTTTTTC 904
Query 839 ACAACATAAAGTCTGTGTTCAAGAACAAACCGTTGGTGATTGTCTGCAACAAGACTGATT 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 905 ACAACATAAAGTCTGTGTTCAAGAACAAACCGTTGGTGATTGTCTGCAACAAGACTGATT 964
Query 899 TGATGCCTATGGAGAACTTATCTGAAGAAGACCGGAAGCTGATTGAAGAGATGAAAGATG 958
||||||||||||||||||||||||||||||| |||| || |||||||||||||||||||
Sbjct 965 TGATGCCTATGGAGAACTTATCTGAAGAAGATAGGAAACTTATTGAAGAGATGAAAGATG 1024
Query 959 AAGCTATGAAGACTGCCATGGGAG-AAGATGAAGATGCAGTGCTTTTGAAGATGAGTACT 1017
||||||||||||||| ||||||| ||| |||||| |||||| ||||| |||||||||||
Sbjct 1025 AAGCTATGAAGACTGAAATGGGAGCAAG-TGAAGAAGCAGTGATTTTGGAGATGAGTACT 1083
Query 1018 TTGACTGAAGAAGGTGTGATGACAGTGAGGAATGCTGCTTGTCAGAGGCTGTTAGATCAG 1077
||||||||||||||||||||| | | | |||||||||||||||
Sbjct 1084 TTGACTGAAGAAGGTGTGATG----T--------C--------A-AGGCTGTTAGATCAG 1122
Query 1078 AGGGTAGCGGCGAAGATGAAATCGAAAAAGATCGTTGACCACTTGAACAGGTTTCATGTG 1137
|||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||
Sbjct 1123 AGGGTAGCGGCGAAGATGAAATCGAAAAAGATCGGTGATCACTTGAACAGGTTCCATGTG 1182
Query 1138 GCGATGCCGAAG-GCTCGTGATGACCAAGATAGGCTCCCTTTTATACCTCAGGTAGCTAA 1196
|||||||||||| | ||||||||||||||| |||||||||| ||||||||||||||||
Sbjct 1183 GCGATGCCGAAGAG-TCGTGATGACCAAGAAAGGCTCCCTTGTATACCTCAGGTAGCT-- 1239
Query 1197 GGAAGCTGGTGAAAAGGAGAAGCGAAAGACCGAGAAGGATTTGGAAGATGAAAATGGTGG 1256
|| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1240 GG----TG---AAAAGGAGAAGCGAAAGACCGAGAAGGATTTGGAAGATGAAAATGGTGG 1292
Query 1257 AGCTGGGGTTTATTCTGCTAGTCTAAAGAAGAACTACATTTTGGCTAAAGAAGAATGGAA 1316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1293 AGCTGGGGTTTATTCTGCTAGTCTAAAGAAGAACTACATTTTGGCTAAAGAAGAATGGAA 1352
Query 1317 GGAAGACATAATACCTGAGATCTGTGA-TGGTCACAATGTTGCTGATTTTGTTGATTCAG 1375
||| || |||||||||||||||||||| || ||| |||||||||||||||||||||||||
Sbjct 1353 GGATGATATAATACCTGAGATCTGTGACTG-TCATAATGTTGCTGATTTTGTTGATTCAG 1411
Query 1376 ACATTTTGAATAGGCTTGAGGAGTTGACAAGTGAAGAAAGTCTCAGGAAGGCAGAGGAAG 1435
|||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct 1412 ACATCTTGAATAGGCTTGAGGAATTGACAAGTGAAGAAAGTCTTAGGAAGGCAGAGGAAG 1471
Query 1436 AAGAAGAAAATGGTTTTGAGATCGAAGGAGAAAAACTTTCGGAGAAGGAGAAGAATGATT 1495
|||||| |||||||||||| ||||| ||| ||||| | |||||||||||||||||||
Sbjct 1472 AAGAAGT---TGGTTTTGAGATTGAAGGCGAAGAACTTACAGAGAAGGAGAAGAATGATT 1528
Query 1496 TGGCTGCTATTCGTAAGAAGAAAGCTTTGCTTATTCAAGAGAGTAGACTTAAGAAGAGCA 1555
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1529 TGGCTGCTATTCGTAAGAAGAAAGCTTTGCTTATTGAAGAGAGTAGACTTAAGAAGAGCA 1588
Query 1556 ATGCACAAAACAGAGCAGCTGTTCCAAGAAAGTTTGGCAAAGATAAGAAGTTTACAAGGA 1615
|||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct 1589 ATGCACAAAACAGAGCAGCTGTTCCAAGAAAGTTTGACAAGGATAAGAAGTTTACAAGGA 1648
Query 1616 AAAGAATGGGTAGAGAGTTATCATCTCTGGGTCTTGATCCGTCTTCTGCTTTGAACCATG 1675
| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||
Sbjct 1649 AGAGAATGGGTAGAGAGTTATCATCTCTTGGTCTTGATCCGTCTTCTGCTTTGAACCGTG 1708
Query 1676 CAAGAAGCAAGTCTAGAGGAAGAAAGAGGGAAAGGTATGATGGTTTGAGTATA-GATGCT 1734
||||||||||||||||||| |||||||||||||||||||||| |||||||| | |||||
Sbjct 1709 CAAGAAGCAAGTCTAGAGGCAGAAAGAGGGAAAGGTATGATGATTTGAGTA-ACGATGCA 1767
Query 1735 ATGGATGTGGATGTGAATGATGATGAGCAACA---GAAGAAGAAGATGTGTCTGAGATCC 1791
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1768 ATGGATGTGGATGTGAATGATGATGAGCAACATAAGAAGAAGAAGATGTGTCTGAGATCT 1827
Query 1792 AGATCAAGATCTTTGTCAAGATCAAGATCAGTGTCAAGGCCACCACATGAGGTTTTACCT 1851
| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1828 AAATCAAGATCTTTGTCAAGATCAAGATCAGTGTCAAGGCCACCACATGAGGTTGTACCT 1887
Query 1852 GGTGAAGGCTTCAAAGATTCTTCACAGAAGATTAAGGCAATTAAGATTGGACACAAATCT 1911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1888 GGTGAAGGCTTCAAAGATTCTTCACAGAAGATTAAGGCAATTAAGATTGGACACAAATCT 1947
Query 1912 CACAGAAAGAGAGACAAAGCTGCACGTCGTGGAGAAGCAGACAGAGTTATACCATCTCTT 1971
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1948 CACAGAAAGAGGGACAAGGCTGCACGTCGTGGAGAAGCAGACAGAGTTATACCATCTCTT 2007
Query 1972 AAACCAAAACACTTGTTTTCAGGGAAAAGAGGCAATGGAAAAAACCAAAGGCGTTGA 2028
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2008 AAACCAAAACACTTGTTTTCAGGGAAAAGAGGCAATGGAAAAAACCAAAGGCGTTGA 2064
> AT1G50920.1 | Symbols: | Nucleolar GTP-binding protein | chr1:18870139-18872930
FORWARD LENGTH=2394
Length=2394
Score = 1515 bits (820), Expect = 0.0
Identities = 1657/2051 (81%), Gaps = 97/2051 (5%)
Strand=Plus/Plus
Query 31 TATAATTTCAAGAAGATAACAGTTGTGCCAAATGGAAAACAGTTTGTTGATATCGTTCTT 90
||||||||||||| ||| |||||||| || ||||| || |||| ||||| ||| | |||
Sbjct 128 TATAATTTCAAGAGGATCACAGTTGTTCCCAATGGGAAGGAGTTCGTTGACATCATCCTT 187
Query 91 TCCCGCACTCAGCGCCAGTCCA-AAACTGTTATCCACAAGAGTGACAAGATCAGCAAACT 149
|| || |||||||| ||| || ||||||| |||||||| || ||||||| | | ||
Sbjct 188 TCACGGACTCAGCGTCAG-ACACCAACTGTTGTCCACAAGGGTTACAAGATTAACCGTCT 246
Query 150 CCGT-AGCTTCTACATGATGAAA-GTGAAGCT-CACACA-ATCAAACTTTAACGATAAGC 205
|||| || |||||||||| |||| || ||| | ||| || | | ||||| | | ||||
Sbjct 247 CCGTCAG-TTCTACATGA-GAAAGGTTAAG-TACACTCAGA-CCAACTTCCATGCGAAGC 302
Query 206 TCTCTGCCATTATCCACGAGTTTCCTCGCCTCGATGAAATCCAACCCTTT-TATGAAT-C 263
||||||| || || |||||||||||||||| || |||||| | ||||| |||| |
Sbjct 303 TCTCTGCAATCATTGACGAGTTTCCTCGCCTTGAACAAATCC-ATCCTTTCTATG-GTGA 360
Query 264 TCTTCTTCATGTGCTTTACAATAAAGATCACTACAAGCTCGCTCTT-GGTCAAGTCAATA 322
|||||||||||||||||||||||||||||| |||||||| ||| || || ||||| || |
Sbjct 361 TCTTCTTCATGTGCTTTACAATAAAGATCATTACAAGCTTGCT-TTAGGCCAAGTGAACA 419
Query 323 CCGCCAAGAACAAGATCAGCAAAATCTCCGCGGATTATGTGAAGCTACTCAAGCATGGTG 382
|||||| |||| ||| |||||||||||| |||||||||||||||||||||| ||||||
Sbjct 420 CCGCCAGGAACTTGATTAGCAAAATCTCCAAGGATTATGTGAAGCTACTCAAGTATGGTG 479
Query 383 ATACTCTGTACCGGTGCAAGTG-CTTAAAAGTGGCTGCTCTTGGGCGTATGTGTACTGTT 441
|| || ||||||| |||||||| ||||| || ||||||||||| |||||||| ||||||
Sbjct 480 ATTCTTTGTACCGCTGCAAGTGTCTTAAG-GTTGCTGCTCTTGGTCGTATGTGCACTGTT 538
Query 442 ATGAAAG-GAATTGGTCCTAGTTTGGCTTATCTTGAGCAGGTTAGGCAACACTTGGCGAG 500
|||| | |||| |||||||||||||||||| |||||| | ||||| ||| |||| ||
Sbjct 539 TTGAA-GCGAATCACTCCTAGTTTGGCTTATCTCGAGCAGATCAGGCAGCACATGGCTAG 597
Query 501 GCTTCCTTCGATTGATCCAAACACTCGAACTCTCTTGATCTGTGGATGTCCTAATGTGGG 560
||||||||| || ||||| |||||||| ||| ||||||| ||||| | |||||||| ||
Sbjct 598 GCTTCCTTCCATCGATCCTAACACTCGTACTGTCTTGATTTGTGGTTACCCTAATGTTGG 657
Query 561 AAAGAGTTCTTTTATGAACAAAGTTACAAGAGCTGATGTGGATGTTCAGCCATATGCTTT 620
|||||||||||||||||||| || || ||||||||||| || || ||||| ||||||||
Sbjct 658 CAAGAGTTCTTTTATGAACAAGGTCACCAGAGCTGATGTTGACGTCCAGCCTTATGCTTT 717
Query 621 CACTACAAAATCACTCTTTCTTGGTCATACTGATTACAAGTGTTTGAGGTATCAGGTGAT 680
||| || ||||| |||||| ||||||||||||||||||||| | | ||||| || || ||
Sbjct 718 CACCACCAAATCCCTCTTTGTTGGTCATACTGATTACAAGTATCTCAGGTACCAAGTCAT 777
Query 681 TGATACACCGGGGCTTTTGGATAGGGAAATTGAAGACCGTAATATCATTGAAATGTGTAG 740
|||||| || ||| ||||||||||| |||| ||||| || |||||||||||||| ||
Sbjct 778 TGATACCCCCGGGATTTTGGATAGGCCCTTTGAGGACCGCAACATCATTGAAATGTGCAG 837
Query 741 TATCACCGCATTGGCTCATCTTCGAGCTGCTGTTTTGTTCTTTCTTGATATTTCGGGTTC 800
|||||| || ||||| ||||||||||||||||||||||||||||| || ||||| || ||
Sbjct 838 TATCACTGCCTTGGCCCATCTTCGAGCTGCTGTTTTGTTCTTTCTCGACATTTCTGGATC 897
Query 801 TTGTGGTTACACCATTGCTCAGCAGGCTTCTCTTTTTCACAACATAAAGTCTGTGTTCAA 860
||||||||||| ||||||||||||||| ||||||| |||| ||| ||||| | || |
Sbjct 898 ATGTGGTTACACTATTGCTCAGCAGGCTGCTCTTTTCCACAGCATCAAGTCCCTCTTTAT 957
Query 861 GAACAAACCGTTGGTGATTGTCTGCAACAAGACTGATTTGATGCCTATGGAGAACTTATC 920
||||||||| ||||| ||||||||||||||||||||||||||||| ||||| ||| | ||
Sbjct 958 GAACAAACCCTTGGTCATTGTCTGCAACAAGACTGATTTGATGCCCATGGAAAACATCTC 1017
Query 921 TGAAGAAGACCGGAAGCTGATTGAAGAGATGAAAGA-TGAAGCTATGAAGACTGCCATGG 979
||||||||| ||||||||||||||||||||||| | |||||||||||||||||| ||||
Sbjct 1018 TGAAGAAGATCGGAAGCTGATTGAAGAGATGAA-GTCTGAAGCTATGAAGACTGCAATGG 1076
Query 980 GAG-AAGATGAAGATGCA-GTGCTTTTGAAGATGAGTACTTTGACTGAAGAAGGTGTGAT 1037
||| ||| |||||| || ||||||||||||||||| ||| |||| || |||||||| ||
Sbjct 1077 GAGCAAG-TGAAGAA-CAAGTGCTTTTGAAGATGAGCACTCTGACAGACGAAGGTGTCAT 1134
Query 1038 GACAGTGAGGAATGCTGCTTGTCAGAGGCTGTTAGATCAGAGGGTAGCGGCGAAGATGAA 1097
| | |||| |||||| || ||| |||||||||||||||| ||||||| ||| ||||||||
Sbjct 1135 GTCTGTGAAGAATGCCGCATGTGAGAGGCTGTTAGATCAAAGGGTAGAGGCCAAGATGAA 1194
Query 1098 ATCGAAAAAGATCGTTGACCACTTGAACAGGTTTCATGTGGCGATGCCGAAGGCTCGTGA 1157
||| ||||||||| |||||| | |||||||| |||||||| || |||||| |||||||
Sbjct 1195 ATCCAAAAAGATCAACGACCACCTAAACAGGTTCCATGTGGCTATCCCGAAGCCTCGTGA 1254
Query 1158 TGACCA-AGATAGGCTCCCTTTTATACCTCAGGTAG--CTA-AGG--AA-GCT--GGT-G 1207
| | || ||| |||||||||| ||||||||||| | || ||| || ||| || |
Sbjct 1255 T-AGCATAGAAAGGCTCCCTTGCATACCTCAGGTTGTTCTGGAGGCTAAAGCTAAGGAAG 1313
Query 1208 AA-----AA-GGAGAAGCGAAAGACCGAGAAGGATTTGGAAGATGAAAATGGTGGAGCTG 1261
| || |||||| |||||||| ||||| ||||||||||| || |||||||||||||
Sbjct 1314 CAGCTGCAATGGAGAAACGAAAGACTGAGAAAGATTTGGAAGAGGAGAATGGTGGAGCTG 1373
Query 1262 GGGTTTATTCTGCTAGTCTAAAGAAGAACTACATTTTGGCTAA-A-GAAGAATGGAAGGA 1319
| |||||||||||||||||||||||||||||||| ||| | || | || |||||||||||
Sbjct 1374 GAGTTTATTCTGCTAGTCTAAAGAAGAACTACATCTTG-C-AACATGATGAATGGAAGGA 1431
Query 1320 AGACATAATACCTGAGAT-CTGTGATGGTCACAATGTTGCTGATTTTGTTGATTCAGACA 1378
|||||| || |||||||| || |||||||||||||| ||||| || ||||| ||||||
Sbjct 1432 AGACATTATGCCTGAGATTCTC-GATGGTCACAATGTGGCTGACTTCATTGATCCAGACA 1490
Query 1379 TTTTGAATAGGCTTG-AGGAGTTGACAA-GTGAAGAAAGTCTCAGGAAGGCAGAGGAAGA 1436
||||| | ||||||| || ||||| || |||||||| | | ||| |||| | || ||
Sbjct 1491 TTTTGCAGAGGCTTGCAG-AGTTGG-AACGTGAAGAAGGGATAAGGGAGGCTGGGGTTGA 1548
Query 1437 AGAAGAAAATGGTTTTGAGATCGA-AGGAGAAAAACTTTCGGA-GA--AGGAGAAGAATG 1492
||||| || | | ||||| || | ||||| |||||||| || || |||| | |
Sbjct 1549 AGAAGC---TGATATGGAGATGGATATT-GAAAAGCTTTCGGATGAGCAGCTGAAGCA-G 1603
Query 1493 ATTTGGCTGCTATTCGTAAGAAGAAAGCTTTGCTTATTCAAGAG-AGTAGACTTAAGAAG 1551
||| ||| ||| | |||||||||||| | || ||| || | | || || ||||||
Sbjct 1604 CTTT--CTGAGATTAGAAAGAAGAAAGCTATACTCATTAAAAACCAC-AGGCTCAAGAAG 1660
Query 1552 AGCAATGCACAAAACAGAGCAGCTGTTCCAAGAAAGTTTGGCAAAGATAAGAAGTTTACA 1611
| | |||||| ||| || || |||||||||||||||||| || || ||||||| |||
Sbjct 1661 ACCGTTGCACAGAACCGATCAACTGTTCCAAGAAAGTTTGATAAGGACAAGAAGTACACA 1720
Query 1612 AGGAAA-AGAATGGGTAGAGAGTTATCATCTCTGGGTCTTGATCCGTCTTCTGCTTTGAA 1670
| ||| ||||||||||| ||||||||| || |||| ||||||||||||||||| || |
Sbjct 1721 AC-AAAGAGAATGGGTAGGGAGTTATCAGCTATGGGACTTGATCCGTCTTCTGCAATGGA 1779
Query 1671 CCATGCAAGAAGCAAGTCTAGAGGAAGAAAGAGGGAAAGGT-ATGATGGTTTGAGTA-TA 1728
|| ||||||||||||||||||||| || |||||||| | | | || | | | ||| |
Sbjct 1780 CCGTGCAAGAAGCAAGTCTAGAGGGAGGAAGAGGGATCGATCA-GAAGATGCGGGTAAT- 1837
Query 1729 GATGCTATGGATGTGGATGTGAATGATG-ATGAG-C-AACAGAAGAAGAAGATGTGTCTG 1785
||||||||||| || |||| | ||| | | || | |||| | |||| || |||| |
Sbjct 1838 GATGCTATGGACGTTGATG--A-TGA-GCAACAGTCGAACA-A-GAAGCAGC-GTGT--G 1888
Query 1786 AGATCCA-GATCAAGATCTTTGTCAAGATCAAGATCAGTGTCAAGGCCACC---ACATGA 1841
||||| | | || ||| || |||| | ||||||||| ||| ||||| || ||||||
Sbjct 1889 AGATCAAAG-TCTAGAGCTATGTCGATATCAAGATCTCAGTCGAGGCCTCCTGCACATGA 1947
Query 1842 GGTTTTACCTGGTGAAGGCTTCAAAGATTCTTCACAGAAGATTAA-GGCAATTAAGATTG 1900
||| | ||||||||||| |||||||| ||| | |||||| ||| ||| |||||||||
Sbjct 1948 AGTTGTGCCTGGTGAAGGATTCAAAGACTCTACTCAGAAG-TTATCGGCCATTAAGATTA 2006
Query 1901 GACAC-AAATCTCACAGAAAGAGAGACAA-AGCTGCACGTCGTGGAGAAGCAGACAGAGT 1958
| || |||||||||| |||||||||||| | |||||||||||| ||||| ||||||||
Sbjct 2007 G-CAATAAATCTCACAAAAAGAGAGACAAGAA-TGCACGTCGTGGTGAAGCTGACAGAGT 2064
Query 1959 TATACCATCTCTTAAACCAAAACACTTGTTTTCAGGGAAAAGAGGCAATGGAAAAAACCA 2018
||||||| | |||| ||| ||||| ||||||||||| || ||||| || ||||||| ||
Sbjct 2065 TATACCAACGCTTAGACCGAAACATTTGTTTTCAGGCAAGAGAGGGAAAGGAAAAA-CCG 2123
Query 2019 A-AGGCGTTGA 2028
| |||||||||
Sbjct 2124 ACAGGCGTTGA 2134
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 101505501990
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5