BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg919813 Length=961 Score E Sequences producing significant alignments: (Bits) Value AT1G10380.1 | Symbols: | Putative membrane lipoprotein | chr1:... 1417 0.0 > AT1G10380.1 | Symbols: | Putative membrane lipoprotein | chr1:3400606-3402324 FORWARD LENGTH=1232 Length=1232 Score = 1417 bits (767), Expect = 0.0 Identities = 889/947 (94%), Gaps = 11/947 (1%) Strand=Plus/Plus Query 3 CTGAAACGTCTAGCTAGCATGAGTTTGAAGTGttcttcttcttctttctttttcgttctc 62 |||||| ||||||| | |||||||||||| |||||||||||||||||||| || ||||| Sbjct 85 CTGAAAGGTCTAGC-A-AATGAGTTTGAAGCGTTCTTCTTCTTCTTTCTTTATCTTTCTC 142 Query 63 tttttcttcttcctt-ctttcttctCATGTCTCCTCACAAGCTTGCCAAAAAACATGCGG 121 |||| |||||| ||| || ||||||||||||||||||||||| ||||||||||||||||| Sbjct 143 TTTTCCTTCTT-CTTCCTCTCTTCTCATGTCTCCTCACAAGCCTGCCAAAAAACATGCGG 201 Query 122 CCAAATACCCATCAAGTACCCGCTCGGAACCGGGTCAGGTTGCGGTGACCCACGTTTCAC 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 202 CCAAATACCCATCAAGTACCCGCTCGGAACCGGGTCAGGTTGCGGTGACCCACGTTTCAC 261 Query 182 ACGTTACATCACGTGCGACCCGGACCAACAGACTTTGACGCTCACCACCCACACAGGCTG 241 ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| | Sbjct 262 ACGTTACATCACGTGTGACCCTGACCAACAGACTTTGACGCTCACCACCCACACAGGCAG 321 Query 242 TTACCCTATCAGTTCCGTCGACTACGCCAAGCAAGAGATCTACGTCACCGACCCGTCCAT 301 ||||||||||| ||| |||||||||||||| ||||||||||||||||| || |||||||| Sbjct 322 TTACCCTATCACTTCTGTCGACTACGCCAAACAAGAGATCTACGTCACTGATCCGTCCAT 381 Query 302 GTCCACGTGTGCATGTACCCGACCCAGCCATGGATTCGGGTTGGATTGGGACGCTCCGTT 361 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 382 GTCTACGTGTGCATGTACCCGACCCAGCCATGGATTCGGGTTGGATTGGGACGCTCCGTT 441 Query 362 TTCTTTCCATGACGACACCGTTTTCACGCTCCTTGACTGTTCCGTAGACGAATCCCCTGT 421 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 442 TTCTTTCCATGACGACACCGTTTTTACGCTCCTTGACTGTTCCGTAGACGAATCCCCTGT 501 Query 422 TTTCACGCCGTTAAGTAACGGTAGCGGACGTGTCTCCCTCTGTGACCGTCAAAGCTCCTC 481 ||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||| Sbjct 502 ATTCACACCGTTAAGTAACGGTAGCGGACGTGTTTCCCTCTGTGATCGTCAAAGCTCCTC 561 Query 482 TATTTGCACCTTCTTGTACTCCAATTGCAGGGCGATAAGTCTAATAAACCTTCAAGTATC 541 |||||||||||||||||||| ||||||||||| ||||| || |||||||| |||||||| Sbjct 562 CATTTGCACCTTCTTGTACTCAAATTGCAGGGCCATAAGCCTCATAAACCTCCAAGTATC 621 Query 542 AACGTGCTGCGTCTACGTGCCTCTTGATCTCGGACCATCGTTCGAAATGGATCTGAACAA 601 |||||| ||||||||||||||||| || |||||||||||||||||||||||| ||||||| Sbjct 622 AACGTGTTGCGTCTACGTGCCTCTAGACCTCGGACCATCGTTCGAAATGGATTTGAACAA 681 Query 602 ACTCAAGTGCTCGTCGTACTCGGGCTTCTACAACCTCGGTCCAGGCCAAGAATCCCACCC 661 ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct 682 ACTCAAGTGCTCGTCATACTCCGGCTTCTACAACCTCGGTCCAGGCCAAGAATCCCACCC 741 Query 662 GGAGAATTGGAACTACGGAATCGCACTCAAGTACAAGTTCAACGTTTTCGATGAGTACCC 721 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 742 GGAGAATTGGAACTACGGAATCGCACTCAAGTACAAGTTCAACGTTTTTGATGAGTACCC 801 Query 722 TGGCGTCTGCGGTGGCTGTGAGCGTAGTAACGGTGCTTGTGGCTTTAACACTCAGACAAG 781 ||||||||||||| |||| |||||||||||||||||||||||||| ||||| ||| |||| Sbjct 802 TGGCGTCTGCGGTAGCTGCGAGCGTAGTAACGGTGCTTGTGGCTTCAACACACAGTCAAG 861 Query 782 CTCGTTCGTTTGTAACTGTCCCGGTGGGATCAACACGACATCGGATTGCTTCTTCCTATA 841 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct 862 CTCGTTCGTTTGTAACTGTCCCGGTGGGATTAACACGACATCGGATTGCTTCTTCCTTTA 921 Query 842 CAACTCTGCTTCTATTCTTGTTCCTTGGCTCTCAAGTAAGAGAATGGGTAATGTACCCTT 901 ||||||||||||||||||||||||||| ||||||| | || | |||||||||||||||| Sbjct 922 TAACTCTGCTTCTATTCTTGTTCCTTGGTTCTCAAG-A-GA-A-TGGGTAATGTACCCTT 977 Query 902 TG-CATGGTTTGTTGTTTGGATGGTTATGAGT-CTGCAATAAAGGAG 946 || |||||||||||||||||||||| ||| || |||| |||||||| Sbjct 978 TGTCATGGTTTGTTGTTTGGATGGTGATG-GTTCTGCGTTAAAGGAG 1023 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 47019161592 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5