BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg919885 Length=412 Score E Sequences producing significant alignments: (Bits) Value AT1G10800.1 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 560 3e-159 > AT1G10800.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: inflorescence meristem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; Has 23 Blast hits to 23 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | chr1:3598158-3598591 REVERSE LENGTH=434 Length=434 Score = 560 bits (303), Expect = 3e-159 Identities = 347/369 (94%), Gaps = 0/369 (0%) Strand=Plus/Plus Query 1 GCATTCTCGCTGTTAAATCCATGGCTCTGGCTGTTGCTATGGGTAAATCGTTCTTCATAC 60 |||||||||| ||||||||||||||||||| |||||||||||| || || ||||||| || Sbjct 58 GCATTCTCGCCGTTAAATCCATGGCTCTGGTTGTTGCTATGGGGAAGTCATTCTTCAAAC 117 Query 61 AACCTGGTTGTGTAATGGATGGTGCACTTGCGATTGTAGCTCTGATTCTCCAGGTGCTTC 120 ||||||| ||||||||||||||| | ||||||||||||||||||||||||||||| |||| Sbjct 118 AACCTGGATGTGTAATGGATGGTACTCTTGCGATTGTAGCTCTGATTCTCCAGGTTCTTC 177 Query 121 TTGAGAAGAAAGGAACCGGGTTCATCGTGGTGGTAAGCTTGTGGCGGGTTCTGAGGGTTG 180 |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| Sbjct 178 TTGAGAAGAAAGGAACCGGGTTCATCGTGGTGGTGAGCTTGTGGCGGGTTCTGCGGGTTG 237 Query 181 TAGAGACTGCGTTTGAGCTTAGTGATGAAGCCATTGAAGTAAAGATAGATGGAATCATCA 240 | |||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct 238 TGGAGACTGCATTTGAACTTAGTGATGAAGCCATTGAAGTGCAGATAGATGGAATCATCA 297 Query 241 GCCAGTTTCAAGCTCTTAGTAAAGAGAATAGAACATTGCTAGAGACTCTTGCAGAGAAAG 300 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 298 GCCAGTTTCAAGCTCTTAGTAAAGAGAATAGAACATTGCTGGAGACTCTTGCAGAGAAAG 357 Query 301 ATGAAGTAATTAAGATGCTAGAGGAAGAGCTAAACCGATTCAAAGAAAATGGCGATATTC 360 ||||||||||||||||||||||||||||||| || |||||||||||||| || ||||||| Sbjct 358 ATGAAGTAATTAAGATGCTAGAGGAAGAGCTTAATCGATTCAAAGAAAACGGTGATATTC 417 Query 361 CATTTGTGA 369 ||||||||| Sbjct 418 CATTTGTGA 426 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 19503886612 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5