BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg919886 Length=1037 Score E Sequences producing significant alignments: (Bits) Value AT1G10810.1 | Symbols: | NAD(P)-linked oxidoreductase superfam... 1061 0.0 AT1G60680.1 | Symbols: | NAD(P)-linked oxidoreductase superfam... 496 2e-139 > AT1G10810.1 | Symbols: | NAD(P)-linked oxidoreductase superfamily protein | chr1:3599271-3600877 FORWARD LENGTH=1253 Length=1253 Score = 1061 bits (574), Expect = 0.0 Identities = 631/659 (96%), Gaps = 2/659 (0%) Strand=Plus/Plus Query 375 GATCGATACCACTGTCCCCATTGAAGTCACTATTGGAGAACTAAAGAAGCTAGTTGAAGA 434 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 491 GATCGATACCACTGTCCCCATTGAAGTCACTATTGGAGAACTGAAGAAGCTAGTTGAAGA 550 Query 435 GGGTAAGATAAAGTACATTGGTTTGTCCGAAGCCTCTGCCTCAACTATAAGGCGAGCCCA 494 ||||||||||||||||||||||||||| ||||||| |||||| |||||||| ||||||| Sbjct 551 GGGTAAGATAAAGTACATTGGTTTGTCTGAAGCCTGTGCCTCGACTATAAGAAGAGCCCA 610 Query 495 TGCTGTTCACCCGCTAACAGCCGTGCAGTTGGAATGGTCTTTGTGGTCGAGAGACGTTGA 554 |||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||| Sbjct 611 TGCTGTTCACCCGCTAACCGCTGTGCAGTTGGAATGGTCTTTATGGTCGAGAGACGTTGA 670 Query 555 AGAAGACATCATTCCTACTTGCAGGGAACTCGGGATTGGAATTGTAGCTTATAGTCCTCT 614 ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct 671 AGAAGACATCATTCCTACTTGCAGGGAGCTCGGGATTGGAATTGTAGCTTACAGTCCTCT 730 Query 615 GGGAC-GGGGCTTCTTTGCTGCAGGACCAAAGTTCATTGAGAATATGGACAATGGTGACT 673 ||||| |||| |||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct 731 GGGACTGGGG-TTCTTTGCTGCAGGACCAAAATTCATTGAGAGTATGGACAATGGTGACT 789 Query 674 ACAGAAAGGGTTTACCGAGATTCCAGCAAGAGAACCTAGACCACAACAAGATTCTCTATG 733 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 790 ACAGAAAGGGTTTACCGAGATTCCAGCAAGAGAACTTAGACCACAACAAGATTCTCTATG 849 Query 734 AGAAGGTCAATGCAATGGCAGAGAAGAAAAGCTGTACTCCTGCACAATTAGCTTTGGCAT 793 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 850 AGAAGGTCAATGCAATGGCAGAGAAGAAAAGCTGTACTCCTGCACAATTAGCTTTGGCAT 909 Query 794 GGGTTCATCACCAAGGAAATGATGTCTGCCCAATCCCAGGAACCTCCAAGATCAAAAACC 853 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 910 GGGTTCATCACCAAGGAAATGATGTCTGCCCAATCCCAGGAACCTCTAAGATCAAAAACC 969 Query 854 TTGATCAGAACATAGGAGCTTTATCTGTCAAACTCACTATCGAAGAGATGGCCGAGCTTG 913 || ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct 970 TTAATCAGAACATAGGAGCTTTATCTGTGAAACTCAGTATCGAAGAGATGGCCGAGCTTG 1029 Query 914 ACGCCATGGGACATCCGGATTCTGTGAAAGGGGAAAGCTCACCCACCTATATAGTTACCT 973 |||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||| | Sbjct 1030 ACGCCATGGGACATCCCGATTCTGTGAAAGGGGAAAGGTCAGCCACCTATATAGTTACTT 1089 Query 974 ACAAGAATTCCGAAACTCCACCATTGTCTTCTTGGACTTCATAAACCAGCTGTTATAGT 1032 |||||||||| |||||||||||| |||||||||||||||||||||||| |||| ||||| Sbjct 1090 ACAAGAATTCTGAAACTCCACCACTGTCTTCTTGGACTTCATAAACCATCTGTAATAGT 1148 Score = 534 bits (289), Expect = 5e-151 Identities = 345/371 (93%), Gaps = 7/371 (2%) Strand=Plus/Plus Query 8 AGAGATTTGAATCCATGGCGGCTGCAAGTGGAGTGCGTAGGATCAAGCTAGGAAGCCAAG 67 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 85 AGAGATTTGAATCCATGGCAGCTGCAAGTGGAGTGCGTAGGATCAAGCTAGGAAGCCAAG 144 Query 68 GTCTTCAAGTGTCAGCGCAAGGTCTTGGTTGTATGGGACTTTCCATCTTAGATGGAACCA 127 ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct 145 GTCTTGAAGTGTCAGCGCAAGGTCTTGGTTGTATGGGACTTTCCATCTTCGATGGAACTA 204 Query 128 CTAAGCTAGACG-CAGATCT-AGTTGCTCTCATTCACCATGCCATTAACTCCGGCATCAC 185 | ||| | || | ||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct 205 CCAAGGTTGA-GACAGATCTCA-TTGCTCTCATTCACCATGCCATTAACTCCGGCATCAC 262 Query 186 GCTCCTCGACACCTCTGACATTTACGGTCCCGAGACCAACGAGTTGCTCCTTGGCCAGGC 245 |||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||| Sbjct 263 ACTCCTCGACACCTCCGACATTTACGGTCCTGAGACCAACGAGTTGCTCCTTGGTCAGGC 322 Query 246 TTTGAGAGATGGGATGAGGGAGAAAGTGGAATTGGCAACCAAATTTGGGATTCTCTT-AA 304 ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| || Sbjct 323 TTTGAAAGATGGGATGAGGGAGAAGGTGGAATTGGCAACCAAATTTGGGCTTCTCTTGAA 382 Query 305 GAGGTGAGAAATTGGGTTACAGGGGAGATCCTGCCTATGTGAGAGCTGCGTGTGAAGCCA 364 || | ||||||||||||||||||||||||| ||||||||||||||||| |||||||| | Sbjct 383 -AGATCAGAAATTGGGTTACAGGGGAGATCCAGCCTATGTGAGAGCTGCCTGTGAAGCAA 441 Query 365 GCTTAAAGGCG 375 |||||| |||| Sbjct 442 GCTTAA-GGCG 451 > AT1G60680.1 | Symbols: | NAD(P)-linked oxidoreductase superfamily protein | chr1:22347622-22349297 REVERSE LENGTH=1304 Length=1304 Score = 496 bits (268), Expect = 2e-139 Identities = 524/646 (81%), Gaps = 24/646 (4%) Strand=Plus/Plus Query 376 ATCGATACCAC-TGTCCCCATTGAAGTCACTATTG-GAGAACTAAAGAAGCTAGTTGAAG 433 ||||||| | | |||||| || ||| |||||| || ||||||| |||||||||||||||| Sbjct 458 ATCGATA-CTCGTGTCCCTATCGAAATCACTA-TGAGAGAACTGAAGAAGCTAGTTGAAG 515 Query 434 AGGGTAAGATAAAGTACATTGGTTTGTCCGAAGCCTCTGCCTCAACTATAAGGCGAGCCC 493 |||||||||||||||| |||||| |||| ||||| || || |||||||| || |||| | Sbjct 516 AGGGTAAGATAAAGTATATTGGTCTGTCAGAAGCTTCAGCTTCAACTATCAGAAGAGCAC 575 Query 494 ATGCTGTTCACCCGCTAACAGCCGTGCAGTTGGAATGGTCTTTGTGGTCGAGAGACGTTG 553 |||||||||||||| |||| || ||||| | |||||||| || ||||||||||||| | Sbjct 576 ATGCTGTTCACCCGATAACTGCGGTGCAAATAGAATGGTCCTTATGGTCGAGAGACGCGG 635 Query 554 AAGAAGACATCATTCCTA-CTTGCAGGGAACTCGGGATTGGAATTGTAGCTTATAGTCCT 612 ||||||| |||||||||| || |||||||||| ||||||||||| ||||||||||| ||| Sbjct 636 AAGAAGATATCATTCCTATCT-GCAGGGAACTTGGGATTGGAATCGTAGCTTATAGCCCT 694 Query 613 CTGGGACGGGGCTTCTTTGCTGCAGGACC-AAAGTT-CATTGAGAATATGGACAATGGTG 670 || ||| | |||||||| || |||||||| ||| || | | |||||| |||| || | || Sbjct 695 CTAGGAAGAGGCTTCTTAGCAGCAGGACCCAAACTTGC-T-GAGAATCTGGAAAACGATG 752 Query 671 ACTACAGAAAGGGTTTACCGAGATTCCAGCAAGAGAACCTAGACCACAACAAGATTCTCT 730 ||| ||||||| | |||| |||||||| ||||| ||| ||||||||||||||||||||| Sbjct 753 ACTTCAGAAAGACTCTACCAAGATTCCAACAAGAAAACGTAGACCACAACAAGATTCTCT 812 Query 731 ATGAGAAGGTCAATGCAATGGCAGAGAAGAAAAGCTGTACTCCTGCACAATTAGCTTTGG 790 |||||| || ||||||||| ||||||||| | || ||||| |||||| |||| || | Sbjct 813 TTGAGAAAGTTTCTGCAATGGCTGAGAAGAAAGGGTGCACTCCAGCACAACTAGCCTTAG 872 Query 791 CATGGGTTCATCACCAAGGAAATGATGTCTGCCCAATCCCAGGAACCTCCAAGATCAAAA 850 |||||||||||||||| ||| ||||||| ||||| || ||||||||| | ||||| ||| Sbjct 873 CATGGGTTCATCACCAGGGAGATGATGTTTGCCCCATTCCAGGAACCACTAAGATTGAAA 932 Query 851 ACCTTGATCAGAACAT-AGGAGCTTTATCTGTCAAACTCACTA-TCGAAGAGATGGCCGA 908 |||| | |||||||| || |||||| || || ||||||||| | ||||| || | || Sbjct 933 ACCTCAACCAGAACATTAG-AGCTTTGTCAGTAAAACTCACTCCT-GAAGAAATATCTGA 990 Query 909 GCTTGACGCCATGGG-ACATCCGGATTCTGTGAAAGGGGAAAGCT-CACCCACCT-ATAT 965 ||| ||| || | | | | || || ||||||||||| ||||| | || ||| | || Sbjct 991 GCTCGACTCCCTTGCCAAA-CCAGAGTCTGTGAAAGGAGAAAGATACATGG-CCTCA-AT 1047 Query 966 AGTT-ACCTACAAGAATTCCGAA-ACTCCACCATTGTCTTCTTGGA 1009 || |||| |||||| ||| || |||||||| |||||||| |||| Sbjct 1048 -GTCCACCTTCAAGAACTCC-AACACTCCACCGTTGTCTTCCTGGA 1091 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 50836956764 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5