BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg919893
Length=2366
Score E
Sequences producing significant alignments: (Bits) Value
AT1G10870.1 | Symbols: AGD4 | ARF-GAP domain 4 | chr1:3616610-3... 3814 0.0
AT1G60860.1 | Symbols: AGD2 | ARF-GAP domain 2 | chr1:22400927-... 1997 0.0
> AT1G10870.1 | Symbols: AGD4 | ARF-GAP domain 4 | chr1:3616610-3623758
REVERSE LENGTH=2769
Length=2769
Score = 3814 bits (2065), Expect = 0.0
Identities = 2268/2367 (96%), Gaps = 10/2367 (0%)
Strand=Plus/Plus
Query 1 GTTTCTTCCTTTTTGTTTCACCAATGGCGACCTTTATCAATCTGGAGGATTCCCCAATGT 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 124 GTTTCTTCCTTTTTGTTTAACCAATGGCGACCTTTATCAATCTGGAGGATTCCCCAATGT 183
Query 61 TTCAGAAACAGGTTTGTTCCTTGGAGGGGACAGCTGATGAGCTTAAAGATCGTTGTCAGA 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 184 TTCAGAAACAGGTTTGTTCCTTGGAGGGGACAGCTGACGAGCTTAAAGATCGTTGTCAGA 243
Query 121 AGCTATACAAAGGTGTTAAGAAGTTTATGGGGACTTTGGGAGAGGCATCCAAAGGAGAAA 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 244 AGCTATACAAAGGTGTTAAGAAGTTTATGGGGACTTTGGGAGAGGCATCTAAAGGAGAAA 303
Query 181 GTGCCTTTGCAGATTGTCTGGAAGAATTTGGAGGTGCACCTGATGATCCTATCAGTCTTT 240
|||| ||||||| |||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct 304 GTGCTTTTGCAGCTTGTCTGGAAGAATTTGGGGGTGGACCTGATGATCCTATCAGTCTTT 363
Query 241 CAATTGGAGGCCCCGTTATATCCAAATTTATAAATTCACTTCGAGAGCTTGCCTCTTATA 300
|||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct 364 CAATTGGAGGGCCCGTTATATCCAAATTCATAAATGCACTTCGAGAGCTTGCCTCTTATA 423
Query 301 AGGAGTTTCTTTGCTCACAGGTGGAGCATGTGTTACTCGAGAGGTTGATGAACTTTATTA 360
|||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct 424 AGGAGTTTCTTTGCTCACAGGTGGAGCATGTGCTACTTGAGAGGTTGATGAACTTTATTA 483
Query 361 ATGTTGATCTACAAGAAGCTAAGGAGTCTCGCCATCGATTTGATAAAGCTGCTCATTCGT 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 484 GTGTTGATCTACAAGAAGCTAAGGAGTCTCGCCATCGATTTGATAAAGCTGCTCATTCGT 543
Query 421 ATGATCAGTCGCGCGAAAAGTTTGTGTCTTTAAAGAAGAATACAAGAGGAGAAATTGTTG 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 544 ATGATCAGTCGCGCGAAAAGTTTGTGTCTTTAAAGAAGAATACAAGAGGAGAAATTGTGG 603
Query 481 CAGAGTTGGAAGAGGATCTGGAGAACTCAAAGTCAACATTTGAGAAGAGCCGTTTCAATC 540
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 604 CAGAGTTGGAAGAGGATCTGGAGAATTCAAAGTCAACATTTGAGAAGAGCCGTTTCAATC 663
Query 541 TAGTAAATTCACTGATGACTATTGAAGCGAAAAAGAAGTATGAGTTTTTAGAATCTATAA 600
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 664 TAGTGAATTCACTGATGACTATTGAAGCGAAAAAGAAGTATGAGTTTTTAGAATCTATTA 723
Query 601 GTGCAATTATGGATGCCCATCTGAGATATTTTAAACTTGGATATGACTTGTTGAGTCAAC 660
| ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct 724 GCGCAATTATGGATGCCCATCTGAGATATTTCAAACTTGGATATGACTTGTTGAATCAAC 783
Query 661 TGGAACCATTTATCCATCAGATATTAACATATGCTCAGCAATCAAAAGAACAGTCTAAGA 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 784 TGGAACCATTTATCCATCAGATATTAACATATGCTCAGCAATCAAAAGAACAGTCTAAGA 843
Query 721 TTGAACAAGATCGACTAGCAAGACGCATTCAAGAATTCAGGACCCAGTCGGAATTAGACA 780
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 844 TTGAACAAGATCGACTAGCAAGACGCATTCAAGAATTCAGGACCCAGTCTGAATTAGACA 903
Query 781 GCCAACAGCTAGCCGCTAACGCAGAACCTTCTGGTGTTAACGGAAACCGTG--G-TGGGA 837
|||||||||| | |||||| ||||| | ||||||| |||||| ||||||| | |||||
Sbjct 904 GCCAACAGCTGGTCGCTAATGCAGAGTCGTCTGGTGCTAACGGGAACCGTGTTGGTGGGA 963
Query 838 -T--CCCTTATAAAAATACCGAAACAAGTTTAACAGCAGACAAGGAAGTAATTAAACAGG 894
| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 964 ATATCCCTTACAAAAATACCGAAACAAGTTTAACAGCAGACAAGGAAGTAATTAAACAGG 1023
Query 895 GGTATTTATTAAAGCGTTCGTCAAGTTTGAGAACTGATTGGAAAAGAAAGTTTTTTGTCC 954
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1024 GGTATCTATTAAAGCGTTCGTCAAGTTTGAGAACTGATTGGAAAAGAAAGTTTTTTGTCC 1083
Query 955 TTGACAGTCATGGCTCCATGTACTATTACAGAACTAATGGTAATAAATCAATGGGATCTC 1014
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1084 TTGATAGTCATGGCTCCATGTACTATTACAGAACTAATGGTAATAAATCAATGGGATCTC 1143
Query 1015 AGCATCACTATAGTGGTTCATCTGACCATAATACTGGCGTATTTGGTCGATTCCGTGCAA 1074
| |||||||||||||| |||||||||||||||||||| || ||||||||||| || ||||
Sbjct 1144 ATCATCACTATAGTGGATCATCTGACCATAATACTGGAGTTTTTGGTCGATTTCGGGCAA 1203
Query 1075 GACATAATCGATCAGGTTCGCTTACTGAGGGCAGCTTAGGCTATAATACTATTGACCTCC 1134
|||||||||||||||||||||| |||||||||||||||||||||||||||||||| || |
Sbjct 1204 GACATAATCGATCAGGTTCGCTCACTGAGGGCAGCTTAGGCTATAATACTATTGATCTTC 1263
Query 1135 GCACTTCTTTGATAAAACTAGACGCAGAAGACATGGATCTTCGGCTCTGTTTCAGAATTA 1194
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1264 GCACTTCTTTGATAAAACTAGACGCAGAAGACATGGATCTTCGTCTCTGTTTCAGAATTA 1323
Query 1195 TTTCTCCTCAAAAAACTTACACACTTCAGGCTGAAAATGGAGCAGATAGGATGGACTGGG 1254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1324 TTTCTCCTCAAAAAACTTACACACTTCAGGCTGAAAATGGAGCAGATAGGATGGACTGGG 1383
Query 1255 TAAATAAGATCACAACAGCTATAGGGACGCTTCTCAATTCTCATTTTCTACAACAGTCAC 1314
||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1384 TAAATAAGATCACAAAAGCTATAGGGACGCTTCTCAATTCTCATTTTCTGCAACAGTCAC 1443
Query 1315 CAGTGCGATTCTTGGATAA-GAGCAACACTAGTTCTGCTCCTGCTAATGCTGTCGTCTCC 1373
| ||||||| ||||||||| || |||| | ||||||||||||||||||||||||||||||
Sbjct 1444 CTGTGCGATACTTGGATAAAGA-CAACTCCAGTTCTGCTCCTGCTAATGCTGTCGTCTCC 1502
Query 1374 GGGGATCAGATTCGACATAATGATGCAAGACAGAATATCGGGGATGATGTCTCAACAATA 1433
|||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct 1503 GGGGATCAAATTCGACATAATGATTCAAGACAAAATATCGGGGATGATGTCTCAACAATA 1562
Query 1434 CTCAGAGGAATTCCGGGAAATAATGCATGTGCAGAGTGCAATGCTCCTGAGCCCGATTGG 1493
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1563 CTCAGAGGACTTCCGGGAAATAATGCATGTGCAGAGTGCAATGCTCCTGAGCCCGATTGG 1622
Query 1494 GCATCATTAAATCTTGGAGTTTTGTTGTGCATTCAATGCTCTGGTGTTCACAGGAATCTC 1553
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1623 GCATCGTTAAATCTTGGAGTTTTGTTGTGCATTCAATGCTCTGGTGTTCACAGGAATCTC 1682
Query 1554 GGCGTTCATATATCCAAGGTGAGATCCCTCTCATTAGATGTGAAAGTGTGGGAGCCAACG 1613
|| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1683 GGGGTTCATATATCCAAGGTGAGGTCCCTCTCATTAGATGTGAAAGTGTGGGAGCCAACG 1742
Query 1614 ATCTTGGACTTGTTTAGAAATTTGGGCAATGTGTACTGTAATTCACTGTGGGAGGGACTA 1673
||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 1743 ATCTTGGACTTATTTAGAAATTTGGGTAATGTATACTGTAATTCACTGTGGGAGGGACTA 1802
Query 1674 CTTCACCTTGACGATGACTGCGAAGACGGATCAGCAATGTCGCATGCATCAGTTTCAAAA 1733
|||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct 1803 CTTCACCTTGACGATGACTGCGAAGACGGATCAGCATTGTCGCATGCTTCAGTTTCAAAA 1862
Query 1734 CCATGTCCAGAAGATTCCTTTAGTGTGAAGGAGAAATACATTCTAGGAAAGTACCTGGAG 1793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1863 CCATGTCCAGAAGATTCCTTTAGTGTGAAGGAGAAATACATTCTAGGAAAGTACCTGGAG 1922
Query 1794 AAAGCATTAGTCGTCAAGGATGAAAGTGAAGCAAAACCTT-CTGCTGCGAGTAGAATATG 1852
|||||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 1923 AAAGCATTAGTCATCAAGGATGAAAGTGAAGCAAA-CCTTTCTGCTGCGAGTAGAATATG 1981
Query 1853 GGAAGCTGTTCAAAGCAGAAACATACGAGAAATCTATCGACTGATTGTTACTACTGGGGA 1912
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 1982 GGAAGCTGTTCAAAGCAGAAACATACGAGAAATCTATCGACTTATAGTTACTACTGGGGA 2041
Query 1913 TGTGAATATTATCAACACCAAGTTCGATGATATAACTGATATTGATGCATATCACCATGT 1972
||| ||||| ||||| |||||||| ||||||||||||||||| ||||||||||||||| |
Sbjct 2042 TGTAAATATCATCAATACCAAGTTTGATGATATAACTGATATCGATGCATATCACCATAT 2101
Query 1973 TGATGCAGCAGAGAAAGCAGTAAAGAAAAGACATGACCCAACTGTGTGTCAGAGAATCAA 2032
|||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||
Sbjct 2102 TGATGCAGCAGAGAAAGCAGTAAAGAAAAGACATGATCCAACTGTATGTCAGAGAATTAA 2161
Query 2033 AGAATCCAACCAAGCAGGAAACTGTCTTCAAGGCTGTTCCTTGCTCCATGTGGCTTGTCA 2092
|||||||||| || || ||| |||||||||||| || |||||||||||||||||||||||
Sbjct 2162 AGAATCCAACGAACCAAGAAGCTGTCTTCAAGGATGCTCCTTGCTCCATGTGGCTTGTCA 2221
Query 2093 CATTGGTGACTCTGTCTTGCTTGAACTGTTGTTGCAGTTTGGTGCTGACCTAAACATAAG 2152
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2222 CATTGGTGACTCTGTCTTGCTTGAATTGTTGTTGCAGTTTGGTGCTGACCTAAACATAAG 2281
Query 2153 AGATTATCACGGAAGGACTCCGTTACACCATTGCATATCATCTGGGAACCACAAATTTGC 2212
|||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct 2282 AGATTATCACGGAAGGACTCCGTTGCACCATTGCATATCATCAGGGAACCACAAATTTGC 2341
Query 2213 AAAGATTCTACTGCGAAGAGGAGCACGCCCATCGATAGAGGACGATGGAGGGCTAAGCGT 2272
||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 2342 AAAGATTCTACTGCGAAGAGGAGCACGTCCGTCGATAGAGGACGATGGAGGGCTAAGCGT 2401
Query 2273 GCTAGAGAGAGCGATGGAAATGGGAGCCATAACTGATGAAGAGCTCTTTCTTCTCTTAGC 2332
||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2402 TCTAGAAAGAGCGATGGAAATGGGAGCGATAACTGATGAAGAGCTCTTTCTTCTCTTAGC 2461
Query 2333 CGAGTGCGCGTAAACCGACACTGCACA 2359
||||||||| |||||| |||||||||
Sbjct 2462 CGAGTGCGCATAAACCTTCACTGCACA 2488
> AT1G60860.1 | Symbols: AGD2 | ARF-GAP domain 2 | chr1:22400927-22407777
REVERSE LENGTH=2786
Length=2786
Score = 1997 bits (1081), Expect = 0.0
Identities = 1969/2389 (82%), Gaps = 96/2389 (4%)
Strand=Plus/Plus
Query 3 TTCTTCCT-TTTTGT-TTCACCAATGGCGACCTTTATCAATCTGGAGGATTCCCCAATGT 60
|||||| | |||| | || | |||||||| ||||||||||| ||||||||||||||||
Sbjct 117 TTCTTCGTGTTTTATCTT-AACAATGGCGGGTTTTATCAATCTTGAGGATTCCCCAATGT 175
Query 61 TTCAGAAACAGGT-TTGTTCCTTGGAGGGGAC-AGCTGATGAGCTTAAAGATCGTTGTCA 118
|||| |||||||| || |||||||| ||||| || ||||||||||||||||||||||||
Sbjct 176 TTCAAAAACAGGTCTT-CTCCTTGGAAGGGACAAG-TGATGAGCTTAAAGATCGTTGTCA 233
Query 119 GAAGCTATACAAAGGTGTTAAGAAGTTTATGGGGA-CTTTGGGAGAGGCATCCAAAGGAG 177
|||| |||||||||||||||||||||| || |||| |||| ||||||||||| | ||||
Sbjct 234 GAAGTTATACAAAGGTGTTAAGAAGTTCAT-GGGAGCTTTAGGAGAGGCATCTACTGGAG 292
Query 178 AAAGTGCCTTTGCAGATTGTCTGGAAGAATTTGGAGGTGCACCTGATGATCCTA-TCAGT 236
|||||||||||||||| ||| ||||| ||||| | || || ||||||||| | |||||
Sbjct 293 TTAGTGCCTTTGCAGATTCTCTTGAAGAGTTTGGTGCTGGACATGATGATCC-AGTCAGT 351
Query 237 CTTTCAATTGGAGGCCCCGTTATATCCAAATTTATAAATTCACTTCGAGAGCT-TGCCTC 295
||||||||||||| || || ||||| || || |||||| ||||||||||||| | ||||
Sbjct 352 GTTTCAATTGGAGGTCCAGTAATATCTAAGTTCATAAATACACTTCGAGAGCTCT-CCTC 410
Query 296 TTATAAGGAGTTTCTTTGCTCACAGGTGGAGCATGTGTTACTCGAGAGGTTGATGAACTT 355
|||||||||||||||| ||||||||||||||||||| ||||| |||||| ||| |||||
Sbjct 411 TTATAAGGAGTTTCTTCGCTCACAGGTGGAGCATGTATTACTTGAGAGGCTGACAAACTT 470
Query 356 TATTAATGTTGATCTACAAGAAGCTAAGGAGTCTCGCCATCGATTTGATAAAGCTGCT-C 414
||| | |||||||||||||||||| ||||||||||| | ||| || |||||||||| | |
Sbjct 471 TATGACTGTTGATCTACAAGAAGCAAAGGAGTCTCGGCGTCGGTTCGATAAAGCTG-TCC 529
Query 415 ATTCGTATGATCAGTCGCGCGAAAAGTTTGTGTCTTTAAAGAAGAATACAAGAGGAGAAA 474
|||| ||||||||| | ||||||||||||||||| ||||||||||||| |||||||| |
Sbjct 530 ATTCTTATGATCAGGCACGCGAAAAGTTTGTGTCGCTAAAGAAGAATACCAGAGGAGACA 589
Query 475 TTGTTGCAGAGTTGGAAGAGGATCTGGAGAACTCAAAGTCAACATTTGAGAAGAGCCGTT 534
||||||| ||||||||||||||| |||||||||| |||||| |||||||||| || ||||
Sbjct 590 TTGTTGCTGAGTTGGAAGAGGATTTGGAGAACTCGAAGTCAGCATTTGAGAAAAGTCGTT 649
Query 535 TCAATCTAGTAAATTCACTGATGACTATTGAAGCGAAAAAGAAGTATGAGTTTTTAGAAT 594
||||||||||||||||||||||||| |||||||| ||||||||||| ||||| || ||||
Sbjct 650 TCAATCTAGTAAATTCACTGATGACCATTGAAGCAAAAAAGAAGTACGAGTTCTTGGAAT 709
Query 595 CTATAAGTGCAATTATGGATGCCCATCTGAGATATTTTAAACTTGGATATGACT-TGTTG 653
|||||||||||||||||||| ||||| | | ||||||||| ||||| ||||| | | ||
Sbjct 710 CTATAAGTGCAATTATGGATTCCCATTTCAAATATTTTAAGCTTGGTTATGA-TCTATTA 768
Query 654 AGTCAACTGGAACCATT-TATCCATCAGATATTAACATATGCTCAGCAATCAAAAGAACA 712
|||||| |||| || || ||||||||| |||| ||||| || || || |||||||||||
Sbjct 769 AGTCAATTGGAGCC-TTACATCCATCAGGTATTGACATACGCACAACAGTCAAAAGAACA 827
Query 713 GTCTAAGATTGAACAAGATCGACTAGCA-AGACGCATTCAAGAATTCAGGACCCAGTCGG 771
|||||||||||||||||||||| | ||| | ||||||||||||||||||||| || || |
Sbjct 828 GTCTAAGATTGAACAAGATCGATTTGCACA-ACGCATTCAAGAATTCAGGACTCAATCTG 886
Query 772 AATTAGACAGCCAACAG-C-TAGCCGCTAACGCAGAACCTTCTGGTGTTAACGGAAACCG 829
||||||||||||||||| | | | ||||| ||||| || || | |||| |||||||
Sbjct 887 AATTAGACAGCCAACAGGCCT--CTGCTAAAGCAGATCCCTCCGATGTTGGTGGAAACCA 944
Query 830 TGGTG---G-G--ATCCCTTATAAAAA--TACC-G-AAACA-AGTTT-AACAGCAGACAA 877
|| | | | ||||| |||||| || | |||| ||||| ||||||||||||
Sbjct 945 TGTTTATAGAGCTATCCCCCGTAAAAACGTAGAAGCAAACTCAGTTTCAACAGCAGACAA 1004
Query 878 GGAAGTAATTAAACAGGGGTATTTATTAAAGCGTTC-GTCAAGTTTGAGAACTGATTGGA 936
|||||||| |||||| |||||| |||||||||| || | | ||||||||| |||||||||
Sbjct 1005 GGAAGTAACTAAACAAGGGTATCTATTAAAGCGATCAG-CTAGTTTGAGAGCTGATTGGA 1063
Query 937 AAAGAAAGTTT-TTTGTCCTTGACAGTCATGGCTCCATGTACTATTACAGAA-CTAATGG 994
|||| | | || ||||| ||||||| ||||| ||| | ||||||||||||| | | ||
Sbjct 1064 AAAGGA-GATTCTTTGTGCTTGACAACCATGGATCCCTATACTATTACAGAAAC-ACCGG 1121
Query 995 TAATAAATCAATGGGATCTCAGCATCACTATAGTGGTTCATCTGACCATAATA-CTGGCG 1053
|||||||||| | |||||||||| |||| ||||||| | || |||| || | ||||
Sbjct 1122 TAATAAATCAGCGAAATCTCAGCATTACTACAGTGGTTTAGGAGAGCATAGTAGC-GGCG 1180
Query 1054 TATTTGGTCGATTCCGTGCAAGACATAATCGATCAGGTTCGCTTACTGAGGGCAGCTTAG 1113
| ||||| |||| ||| ||||||| |||||||||| ||| || |||| ||| |||
Sbjct 1181 TCTTTGGGAGATTTCGTACAAGACACAATCGATCAGCTTC----AC--AGGGAAGCCTAG 1234
Query 1114 GCTATAATACT-ATTGACCTCCGCACTTCTTTGATAAAACTAGACGCAGAAGACATGGAT 1172
| |||| | || || ||||| ||||| |||||||| | |||||||| |||| |||
Sbjct 1235 ATTGCAATA-TGATCGATCTCCGTACTTCACTGATAAAATTGGACGCAGAGGACACAGAT 1293
Query 1173 CTTCGGCTCTGTTTCAGAATTATTTCTCCTCAAAAAACTTACACACTTCAGGCTGAAAAT 1232
||||| |||||||| |||||||| ||||||||||| ||||||||||| ||||||||||||
Sbjct 1294 CTTCGACTCTGTTTTAGAATTATATCTCCTCAAAAGACTTACACACTACAGGCTGAAAAT 1353
Query 1233 GGAGCAGATAGGATGGACTGGGTAAATAAGATCACAACAGCTATAGGGACGCTTCTCAAT 1292
||||| ||||||||||| |||||||||||||||||| |||||||| | | ||| |||
Sbjct 1354 GGAGCTGATAGGATGGATTGGGTAAATAAGATCACAGCAGCTATAACAATACGTCTGAAT 1413
Query 1293 TCTCATTTTCTACAACAGTCACCAGTGCGATTCTTGGATAAGA-GCAACACTAGTTCTGC 1351
||||||||||| || |||||||||| ||| ||||||||| | | || ||||||||||
Sbjct 1414 TCTCATTTTCTGCAGCAGTCACCAGCAAGATACTTGGATAAAAAG-AATACTAGTTCTGG 1472
Query 1352 TCCTGCTAATGCTGTCGTCTCCGGGGATCAGATTCGAC-ATAATGATGCAA-GAC-AGAA 1408
|||||| | || | || || | |||| | || || || || ||| ||| | ||
Sbjct 1473 TCCTGCCACTGAAAACCTCACCCTGAATCAAAAA-GAAGATTATAAT-CAAAGACTA-AA 1529
Query 1409 TATCGGGGATGATGTC-TCAACAATACTCAGAGGAATTCCGGGAAATAATGCATGTGCAG 1467
| | |||||||| ||| | | |||||||||||| |||||| |||||||| | |||||||
Sbjct 1530 TGTGGGGGATGACGTCCTTA-CAATACTCAGAGAAATTCCTGGAAATAACACTTGTGCAG 1588
Query 1468 AGTGCAATGCTCCTGAGCCCGATTGGGCATCATTAAATCTTGGAGTTTTGTTGTGCATTC 1527
| |||||||| ||||| ||||||||||||||||| ||||||||||||||| ||||||||
Sbjct 1589 AATGCAATGCACCTGACCCCGATTGGGCATCATTGAATCTTGGAGTTTTGATGTGCATTG 1648
Query 1528 AATGCTCTGGTGTTCACAGGAATCTCGGCGTTCATATATCCAAGGTGAGATCCCTCTCAT 1587
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct 1649 AATGCTCTGGTGTTCACAGGAATCTCGGCGTTCATATATCCAAGGTGAGATCGCTCACAT 1708
Query 1588 TAGATGTGAAAGTGTGGGAGCCAACGATCTTGGACTTGTTTAGAAATTTGGGCAATGTG- 1646
| ||||||||||| |||||||| || ||||||||||| ||| | || || ||||| | |
Sbjct 1709 TGGATGTGAAAGTATGGGAGCCTACAATCTTGGACTTATTTCGGAACTTAGGCAACG-GA 1767
Query 1647 TACTGTAATTCACTGTGGGAGG-GACTACTTCA-C-C-TTGACGATGACTGCGAAGACGG 1702
|||||||||||| | ||||||| | |||||||| | | ||||||||||| | ||| | ||
Sbjct 1768 TACTGTAATTCAGTCTGGGAGGAG-CTACTTCATCACCTTGACGATGACAGTGAAAAGGG 1826
Query 1703 ATC-AGCAATGTCGCA-T-GCATCAGTTTCAAAACCATGTCCAGAAGATTCCTTTAGTGT 1759
||| | || | | || | ||||||||||| ||||||| | ||||||||| |||| | |
Sbjct 1827 ATCGA-CA--GACACACTTGCATCAGTTTCGAAACCATCTTCAGAAGATTGGTTTACTCT 1883
Query 1760 GAAGGAGAAATACATTCTA-GGAAAGTACCTGGAGAAAGCATTAGTCGTCAAGGATGAAA 1818
|||||||||||| ||| | ||||||||||||||||||||| |||| ||||| |||||||
Sbjct 1884 GAAGGAGAAATATATTA-ACGGAAAGTACCTGGAGAAAGCACTAGTTGTCAAAGATGAAA 1942
Query 1819 GTGAAGCAAAACCTTCTGC-TGCGAGTAGAATATGGGAAGCTGTTCAAAGCAGAAACATA 1877
| |||||||| || |||| | | ||||||||||||||||| ||||||||||| ||||||
Sbjct 1943 GAGAAGCAAATTCTACTGCCT-CAAGTAGAATATGGGAAGCGGTTCAAAGCAGGAACATA 2001
Query 1878 CGAGAAATCTATCGACTGATTGTTACTACTGGGGATGTGAATATTATCAACACCAAGTTC 1937
|||| ||||| ||||| ||||| | | | |||| ||||| ||||| |||||||||
Sbjct 2002 AGAGACATCTACCGACTCATTGTAAA-A--GCAGATGCAAATATCATCAATACCAAGTTC 2058
Query 1938 GATGATATAACTGATATTGATGCATATCACCA------TGTTGATGCAGCAGA-GAAAGC 1990
|||||||| ||||| |||||| ||||||||| |||||||||| |||| ||| |
Sbjct 2059 GATGATATTACTGACCTTGATGTATATCACCACCACCATGTTGATGCACCAGATGAA-G- 2116
Query 1991 AGTAAAGAAAAGACATGACCCAACTGTGTGTCAGAGAATCAAAGAATCC-AACCAAGCAG 2049
|||||||||| || || |||| || ||||||||||||||| |||| | ||| |||||
Sbjct 2117 --TAAAGAAAAGGCACGATCCAAATGCGTGTCAGAGAATCAA-GAATTCGAACGAAGCAA 2173
Query 2050 GAAACTGTCTTCAAGGCTGTTCCTTGCTCCATGTGGCTTGTCACATTGGTGACTCTGTCT 2109
||||||||||||||||||| || ||| | |||||||| ||||| | |||||| | |||
Sbjct 2174 GAAACTGTCTTCAAGGCTGCTCATTGTTGCATGTGGCGTGTCAAAGCGGTGACCCAATCT 2233
Query 2110 TGCTTGAACTGTTGTTGCAGTTTGGTGCTGACCTAAACATAAGAGATTATCACGGAAGGA 2169
||||||||||| |||||||||| || |||||| ||||||| |||||||| |||||| | |
Sbjct 2234 TGCTTGAACTGCTGTTGCAGTTCGGGGCTGACATAAACATGAGAGATTACCACGGACGAA 2293
Query 2170 CTCCGTTACACCATTGCATATCATCTGGGAACCACAAATTTGCAAAGATTCTACTGCGAA 2229
|||| |||||||||||||| |||| |||||| || |||||||||| || | ||| |||
Sbjct 2294 CTCCATTACACCATTGCATCGCATCAGGGAACAACGCATTTGCAAAGGTTTTGCTGAGAA 2353
Query 2230 GAGGAGCACGCCCATCGATAGAGGACGATGGAGGGCTAAGCGTGCTAGAGAGAGCGATGG 2289
|||| || || ||||| |||||||| | |||||| |||| ||| | || || || ||||
Sbjct 2354 GAGGTGCTCGTCCATCAATAGAGGATGGTGGAGGATTAAGTGTGTTGGAAAGGGCAATGG 2413
Query 2290 AAATGGGAGCCATAACTGATGAAGAGCTCTTTCTTCTCTTAGCCGAGTG 2338
| |||||||||||||| |||||||||||||| ||||| ||||| |||||
Sbjct 2414 AGATGGGAGCCATAACCGATGAAGAGCTCTTCCTTCTATTAGCAGAGTG 2462
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 117469275300
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5