BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg919903
Length=1137
Score E
Sequences producing significant alignments: (Bits) Value
AT1G10940.2 | Symbols: | Protein kinase superfamily protein | ... 1757 0.0
AT1G60940.1 | Symbols: SNRK2-10, SNRK2.10, SRK2B | SNF1-related... 1149 0.0
AT5G63650.1 | Symbols: SNRK2-5, SNRK2.5, SRK2H | SNF1-related p... 603 2e-171
> AT1G10940.2 | Symbols: | Protein kinase superfamily protein
| chr1:3655813-3658608 REVERSE LENGTH=1791
Length=1791
Score = 1757 bits (951), Expect = 0.0
Identities = 1085/1145 (95%), Gaps = 27/1145 (2%)
Strand=Plus/Plus
Query 17 GCGAGAATGGACAAGTACGAGCTGGTGAAAGACATAGGTGCTGGGAATTTCGGAGTGGCC 76
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 433 GCGAGAATGGACAAGTACGAGCTGGTGAAAGACATAGGTGCTGGGAATTTTGGAGTTGCC 492
Query 77 AGGCTCATGAAGGTCAAAAACTCTAAGGAACTTGTTGCCATGAAGTACATCGAGCGTGGT 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 493 AGGCTCATGAAGGTCAAAAACTCTAAGGAACTTGTTGCCATGAAGTACATCGAGCGTGGT 552
Query 137 CCTAAGATTGATGAGAACGTGGCAAGAGAGATCATTAATCACAGATCACTTCGCCATCCG 196
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 553 CCTAAGATTGATGAGAATGTGGCAAGAGAGATCATTAATCACAGATCACTTCGCCATCCG 612
Query 197 AATATAATCCGGTTTAAGGAGGTTGTGTTGACTCCAACCCATCTTGCCATTGCTATGGAA 256
|||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 613 AATATAATCCGGTTCAAGGAGGTGGTGTTGACTCCAACCCATCTTGCCATTGCCATGGAA 672
Query 257 TATGCTGCTGGTGGTGAACTATTCGAGCGTATCTGCAGTGCTGGAAGA-TT--T-A-G-T 310
|||||||||||||||||||||||||||||||| ||||||||||||||| || | | | |
Sbjct 673 TATGCTGCTGGTGGTGAACTATTCGAGCGTATATGCAGTGCTGGAAGATTTAGTGAGGAT 732
Query 311 ------GAA--G---ATGAG-------GCGAGATACTTCTTCCAACAACTTATATCAGGT 352
||| | | ||| |||||||| |||||||| || ||||||||||||
Sbjct 733 GAGGAGGAAGGGAACAAGAGAAAACATGCGAGATATTTCTTCCAGCAGCTTATATCAGGT 792
Query 353 GTTAGTTATTGCCATGCTATGCAAATATGCCACAGAGATCTGAAGCTCGAGAATACGCTC 412
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 793 GTTAGCTATTGCCATGCTATGCAAATATGCCATAGAGATCTGAAGCTCGAGAATACGCTC 852
Query 413 CTGGATGGAAGTCCTGCTCCACGTCTGAAAATCTGTGATTTTGGTTATTCCAAGTCCTCT 472
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 853 TTGGATGGAAGTCCTGCTCCACGTCTGAAAATCTGTGATTTTGGTTATTCCAAGTCCTCT 912
Query 473 CTGCTGCACTCTAGGCCCAAATCAACAGTTGGAACTCCAGCGTATATTGCACCTGAGGTC 532
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 913 CTGCTGCACTCTAGGCCCAAATCAACAGTTGGAACTCCAGCATATATTGCACCTGAGGTC 972
Query 533 CTTTCTCGGAGAGAATATGATGGCAAGATGGCTGATGTATGGTCCTGTGGTGTGACTCTT 592
|||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 973 CTTTCTCGAAGAGAATATGATGGCAAGATGGCTGATGTATGGTCTTGTGGTGTGACTCTT 1032
Query 593 TATGTCATGCTGGTTGGAGCGTACCCATTTGAAGACCAGGAAGACCCCAAAAACTTCAGG 652
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 1033 TATGTCATGCTGGTTGGAGCATACCCATTTGAAGACCAGGAAGACCCCAAGAACTTCAGG 1092
Query 653 AAAACAATACAAAAAATAATGGCTGTCCAGTACAAGATCCCGGACTACGTCCACATCTCA 712
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1093 AAAACAATACAAAAAATAATGGCTGTCCAGTACAAGATCCCGGACTACGTCCATATCTCA 1152
Query 713 CAGGATTGTAAACATCTCCTTTCCCGTATATTTGTCGCCAATTCACTCAAGAGGATAACC 772
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1153 CAGGATTGTAAAAATCTCCTTTCCCGTATATTTGTCGCCAATTCACTCAAGAGGATCACC 1212
Query 773 ATTGCAGAAATCAAGAAACACCCATGGTTCCTGAAGAATTTGCCAAGAGAACTCACAGAG 832
|||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||
Sbjct 1213 ATTGCAGAAATCAAGAAACATTCATGGTTCCTAAAGAATTTGCCAAGGGAACTCACAGAG 1272
Query 833 ACAGCTCAAGCTGCATATTTCAAGAAAGAGAACCCAACCTTCTCCCTCCAGACTGTTGAA 892
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 1273 ACAGCTCAAGCTGCATATTTCAAGAAAGAGAACCCAACCTTCTCCCTTCAGACCGTTGAA 1332
Query 893 GAGATCATGAAGATAGTGGCTGACGCCAAAACACCGCCTCCTGTTTCCCGGTCCATCGGA 952
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1333 GAGATCATGAAGATAGTGGCTGACGCCAAAACACCGCCTCCTGTTTCCCGATCCATCGGA 1392
Query 953 GGTTTTGGCTGGggaggaaatggagatgtagagggaaaggaggaagatgcagaagacgtg 1012
||||||||||||||||||||||| |||| ||| ||||| |||||||||||||||||||||
Sbjct 1393 GGTTTTGGCTGGGGAGGAAATGGGGATGCAGATGGAAAAGAGGAAGATGCAGAAGACGTG 1452
Query 1013 gaggaggaagaggaggaggaggtggaagaagaggaagacgatgaggaTGAATACGATAAG 1072
||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1453 GAGGAGG-A-A-GAGGAGGAGGTGGAAGAAGAGGAAGACGATGAGGATGAATACGATAAG 1509
Query 1073 ACTGTAAAGGAAGTACACGCAAGTGGAGAAGTGAGAATAAGTTGATATTTTGGTTTTTGG 1132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1510 ACTGTAAAGGAAGTACACGCAAGTGGAGAAGTGAGAATAAGTTGATATTTTGGTTTTTGG 1569
Query 1133 TCTGT 1137
|||||
Sbjct 1570 TCTGT 1574
> AT1G60940.1 | Symbols: SNRK2-10, SNRK2.10, SRK2B | SNF1-related
protein kinase 2.10 | chr1:22439123-22442190 REVERSE LENGTH=1655
Length=1655
Score = 1149 bits (622), Expect = 0.0
Identities = 942/1094 (86%), Gaps = 31/1094 (3%)
Strand=Plus/Plus
Query 22 AATGGACAAGTACGAGCTGGTGAAAGACATAGGTGCTGGGAATTTCGGAGTGGCCAGGCT 81
|||||||||||||||||| || |||||||| |||||||||||||| |||||||| |||||
Sbjct 294 AATGGACAAGTACGAGCTTGTTAAAGACATCGGTGCTGGGAATTTTGGAGTGGCGAGGCT 353
Query 82 CATGAAG-GTCAAAAACTCTAAGGAACTTGTTGCCATGAAGTACATCGAGCGTGGTCCTA 140
|||| || ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||
Sbjct 354 CATG-AGAGTCAAAAACTCCAAGGAACTCGTTGCTATGAAGTACATCGAGCGTGGACCTA 412
Query 141 AGATTGATGAGAACGTGGCAAGAGAGATCATTAATCACAGATCACTTCGCCATCCGAATA 200
||||||||||||||||||| |||||||| ||||| |||||||||||||| ||||| ||||
Sbjct 413 AGATTGATGAGAACGTGGCGAGAGAGATTATTAACCACAGATCACTTCGTCATCCCAATA 472
Query 201 TAATCCGGTTTAAGGAGGTTGTGTTGACTCCAAC-C-CATCTTGCCATTGCTATGGAATA 258
| ||||||||||||||||| || ||||| ||||| | |||| |||||||||||||||||
Sbjct 473 TTATCCGGTTTAAGGAGGTGGTTTTGACACCAACGCACATC--GCCATTGCTATGGAATA 530
Query 259 TGCTGCTGGTGGTGAACTATTCGAGCGTATCTGCAGTGCTGGAAGATTTAGTGAAGATGA 318
||||||||| ||||| ||||| |||||||| || || ||||||||||| ||||| |||||
Sbjct 531 TGCTGCTGGCGGTGAGCTATTTGAGCGTATATGTAGCGCTGGAAGATTCAGTGAGGATGA 590
Query 319 GGCGAGATACTTCTTCCAACAACTTATATCAGGTGTTAGTTATTGCCATGCTATGCAAAT 378
||| |||||||| ||||| || ||||| ||||| || || ||||| ||||||||||||||
Sbjct 591 GGCAAGATACTTTTTCCAGCAGCTTATCTCAGGAGTCAGCTATTGTCATGCTATGCAAAT 650
Query 379 ATGCCACAGAGATCTGAAGCTCGAGAATACGCTCCTGGATGGAAGTCCTGCTCCACGTCT 438
||||||||||||||||||||| || ||||| ||| | |||||||||||||||||||| ||
Sbjct 651 ATGCCACAGAGATCTGAAGCTTGAAAATACCCTCTTAGATGGAAGTCCTGCTCCACGCCT 710
Query 439 GAAAATCTGTGATTTTGGTTATTCCAAGTCCTCTCTGCTGCACTCTAGGCCCAAATCAAC 498
||| ||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||
Sbjct 711 GAAGATCTGTGATTTTGGTTATTCCAAGTCCTCACTGTTGCACTCTATGCCCAAATCAAC 770
Query 499 AGTTGGAACTCCAGCGTATATTGCACCTGAGGTCCTTTCTCG-GAGAGAATATGATGGCA 557
|||||||||||||| ||||||||||||||||| |||||||| | |||| ||||||||||
Sbjct 771 TGTTGGAACTCCAGCATATATTGCACCTGAGGTTCTTTCTCGCG-GAGAGTATGATGGCA 829
Query 558 AGATGGCTGATGTATGGTCCTGTGGTGTGACTCTTTATGTCATGCTGGTTGGAGCGTACC 617
||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||
Sbjct 830 AGATGGCTGATGTATGGTCTTGTGGTGTGACTCTTTATGTCATGCTGGTGGGAGCATACC 889
Query 618 CATTTGAAGACCAGGAAGACCCCAAAAACTTCAGGAAAACAATACAAAAAATAATGGCTG 677
||||||||||||| || || ||||||||||||| ||||||||||||| |||||||||||
Sbjct 890 CATTTGAAGACCAAGAGGATCCCAAAAACTTCAAAAAAACAATACAAAGAATAATGGCTG 949
Query 678 TCCAGTACAAGATCCCGGACTACGTCCACATCTCACAGGATTGTAAACATCTCCTTTCCC 737
|| ||||||||||||||||||| ||||| |||||||| ||||| ||||||||||| ||||
Sbjct 950 TCAAGTACAAGATCCCGGACTATGTCCATATCTCACAAGATTGCAAACATCTCCTCTCCC 1009
Query 738 GTATATTTGTCGCCAATTC-ACTCAAGAGGATAACCATTGCAGAAATCAAGAAACACCCA 796
||||||||||| |||| || | | |||||||| || || | || ||||||||||| |||
Sbjct 1010 GTATATTTGTCACCAACTCGAAT-AAGAGGATTACGATAGGTGACATCAAGAAACATCCA 1068
Query 797 TGGTTCCTGAAGAATTTGCCAAGAGAACTCACAGAGACAGCTCAAGCTGCATATTTCAAG 856
|||||||| ||||| ||||||| ||||| ||||| | ||||||||||||||| |||| |
Sbjct 1069 TGGTTCCTAAAGAACCTGCCAAGGGAACTTACAGAAATAGCTCAAGCTGCATACTTCAGG 1128
Query 857 AAAGAGAACCCAACCTTCTCCCTCCAGA-CTGTTGAAGAGATCATGAAGATAGTGGCTGA 915
||||||||||| || ||||| ||||| | | || |||||||| |||||||| |||| ||
Sbjct 1129 AAAGAGAACCCGACATTCTCACTCCAAAGC-GTCGAAGAGATAATGAAGATTGTGGAAGA 1187
Query 916 CGCCAAAACACC-GCCTCCTGTTTCCCGGTCCATCGGAGGTTTTGGCTGGggaggaa-at 973
|| ||||| || || || |||||| ||||| || |||| ||||| ||||||||| |
Sbjct 1188 GGCAAAAACTCCAGC-TCGTGTTTCTCGGTCGATTGGAGCATTTGGGTGGGGAGGAGGA- 1245
Query 974 ggagatgtagagggaaaggaggaagatgcagaagacgtggaggaggaagaggaggaggag 1033
| ||||| ||||| ||||||||||||||||| | | | || ||| ||||| ||
Sbjct 1246 GAAGATGCCGAGGGCAAGGAGGAAGATGCAGA-G--G---A--AG-AAGTTGAGGA--AG 1294
Query 1034 gtggaagaagaggaagacgatgaggaTGAATACGATAAGACTGTAAAGGAAGTACACGCA 1093
| |||||||| |||||||| || ||||| || |||||||| || ||| |||| || ||
Sbjct 1295 -TAGAAGAAGAAGAAGACGAAGAAGATGAGTATGATAAGACGGTGAAGCAAGTGCATGCT 1353
Query 1094 AG--TGG-AGAAGT 1104
|| ||| ||||||
Sbjct 1354 AGCATGGGAGAAGT 1367
> AT5G63650.1 | Symbols: SNRK2-5, SNRK2.5, SRK2H | SNF1-related
protein kinase 2.5 | chr5:25481517-25483719 REVERSE LENGTH=1421
Length=1421
Score = 603 bits (326), Expect = 2e-171
Identities = 715/901 (79%), Gaps = 34/901 (4%)
Strand=Plus/Plus
Query 23 ATGGACAAGTACGAGCTGGTGAAAGACATAGGTGCTGGGAATTTCGGAGTGGC-CAGGC- 80
||||||||||| ||| | ||||| || | || ||||| ||||| || ||||| | | |
Sbjct 225 ATGGACAAGTATGAGGTTGTGAAGGATTTGGGAGCTGGAAATTTTGGTGTGGCTC-GTCT 283
Query 81 TCATGAAGGTCA-AAA-ACTCTAAGGAACTTGTTGCCATGAAGTACATCGAGCGTGGTC- 137
|| | | | || ||| | | || || || ||||| ||||| ||||| ||| | ||||
Sbjct 284 TC-T-TA-GACACAAAGAGACCAAAGAGCTCGTTGCTATGAAATACATTGAGAGAGGTCG 340
Query 138 CTAAGATTGATGAGAACGTGGCAAGAGAGATCATTAATCACAGATCACTTCGCCATCCGA 197
| |||||||||||||| |||||||||||||| || ||||| ||||||||| | ||||| |
Sbjct 341 C-AAGATTGATGAGAATGTGGCAAGAGAGATTATCAATCATAGATCACTTAGGCATCCTA 399
Query 198 ATATAATCCGGTTTAAGGAGGTTG-TGT-TGACTCCAACCCATCTTGCCATTGCT-ATGG 254
|||| ||| | || ||||||| || | | |||||||||| |||||||| |||| | ||||
Sbjct 400 ATATCATCAGATTCAAGGAGG-TGAT-TCTGACTCCAACTCATCTTGCAATTG-TAATGG 456
Query 255 AATATGCTGCTGGTGGTGAACTATTCGAGCGTATCTGCAGTGCTGGAAGATTTAGTGAAG 314
| |||||| |||| || || || || || | ||||| | |||||| ||||| |||||||
Sbjct 457 AGTATGCTTCTGGAGGAGAGCTCTTTGAAAGAATCTGTAATGCTGGTAGATTCAGTGAAG 516
Query 315 ATGAGGCGAGATACTTCTTCCAACAACTTATATCAGGTGTTAG-TTATTGCCATGCTA-T 372
|||||| ||||||||||| || || || || | || | | | ||| || ||| | | |
Sbjct 517 CTGAGGCTAGATACTTCTTTCAGCAGCTGATTTGTGGCG-TGGATTACTGTCATTC-ACT 574
Query 373 GCAAATATGCCACAGAGATCTGAAGCTCGAGAATACGCTCCTGGATGGAAGTCCTGCTCC 432
||||||||| || |||||| ||||||| |||||||| || || ||||| ||||| || ||
Sbjct 575 GCAAATATGTCATAGAGATTTGAAGCTTGAGAATACACTGCTTGATGGTAGTCCAGCCCC 634
Query 433 ACGTCTGAAAATCTGTGATTTTGGTTATTCCAAGTCCTCTCTGCTGCACTCTAGGCCCAA 492
| | |||||||||||||||||||||| |||||||| |||||||| |||||||| || ||
Sbjct 635 GCTTTTGAAAATCTGTGATTTTGGTTACTCCAAGTCATCTCTGCTTCACTCTAGACCTAA 694
Query 493 ATCAACAGTTGGAACTCCAGCGTATATTGCACCTGAGGTCCTTTCTCGGAGAGAATATGA 552
|||||| ||||| |||||||| ||||| |||||||| || ||||| || |||||||||||
Sbjct 695 ATCAACTGTTGGTACTCCAGCTTATATCGCACCTGAAGTTCTTTCCCGAAGAGAATATGA 754
Query 553 TGGCAAG-ATGGCTGATGTATGGTCCTGTGGTGTGACTCTTTATGTCATGCTGGTTGGAG 611
|| ||| || || ||||| |||||||||||||||||||||||||| ||| | |||||||
Sbjct 755 CGGAAAGCAT-GCGGATGTTTGGTCCTGTGGTGTGACTCTTTATGTGATGTTAGTTGGAG 813
Query 612 CG-TACCCATTTGAAGACCAGGAAGACCCCAAAAACTTCAGGAAAACAATACAAAAAATA 670
| || || |||||||||| ||| || || | |||||||||||||||||| ||| |||
Sbjct 814 -GTTATCCGTTTGAAGACCCGGATGATCCGAGAAACTTCAGGAAAACAATCCAACGTATA 872
Query 671 ATGGCTGTCCAGTACAAGATCCCGGACTACGTCCACATCTCACAGGATTGTAAACATCTC 730
|||||||||||||||||||||||||| ||||| || || || ||||| || | ||| ||
Sbjct 873 ATGGCTGTCCAGTACAAGATCCCGGATTACGTTCATATATCGCAGGAGTGCAGACACCTT 932
Query 731 CTTTCCCGTATATTTGTCGCCAATTCA-CTCAAGAGGATAAC-CATTGCAGAAATCAAGA 788
|| || || ||||||||| | |||||| || ||||| || || | || ||| |||||||
Sbjct 933 CTCTCTCGCATATTTGTCACTAATTCAGCT-AAGAGAATCACAC-TTAAAGAGATCAAGA 990
Query 789 AACACCCATGGTTCCTGAAGAATTTGCCAAGAGAA-CTCACAGAGACAGCTCAAGCTGCA 847
| || ||||||| | | ||||| ||||||| || | || |||||| | |||||||| ||
Sbjct 991 AGCATCCATGGTACTTAAAGAACTTGCCAA-AGGAGCTTACAGAGCCTGCTCAAGCGGCG 1049
Query 848 TATTTCAAGAAAGAGAACCC-AACCTTCTCCCTCCAGA-CTGTTGAAGAGATCATGAAGA 905
|| | ||||| ||| ||||| || ||| |||||||| | | || || || || |||||||
Sbjct 1050 TACTACAAGAGAGA-AACCCCAAGCTTTTCCCTCCAAAGC-GTAGAGGACATAATGAAGA 1107
Query 906 T 906
|
Sbjct 1108 T 1108
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 55772805495
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5