BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg919961
Length=1051
Score E
Sequences producing significant alignments: (Bits) Value
AT1G11460.1 | Symbols: | nodulin MtN21 /EamA-like transporter ... 1476 0.0
AT1G11450.2 | Symbols: | nodulin MtN21 /EamA-like transporter ... 1365 0.0
AT1G01070.1 | Symbols: | nodulin MtN21 /EamA-like transporter ... 1075 0.0
> AT1G11460.1 | Symbols: | nodulin MtN21 /EamA-like transporter
family protein | chr1:3857005-3859268 FORWARD LENGTH=1014
Length=1014
Score = 1476 bits (799), Expect = 0.0
Identities = 944/1015 (93%), Gaps = 5/1015 (0%)
Strand=Plus/Plus
Query 21 ATGAGTGAGGATATGGGAGGAGTGAAAGTAGTCTCAAAATGGCCACCGGTTATAGTTATG 80
||| ||||||||||| ||| ||||||||||| ||||||||||||||| | ||||| |||
Sbjct 1 ATGGGTGAGGATATGCGAGTAGTGAAAGTAGAATCAAAATGGCCACCGATAATAGTAATG 60
Query 81 GTGACATCACAAGTAGCGATGGGCTCGGTGAATGCACTTGTGAAGAAAGCTCTCGATGTT 140
|| | |||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 61 GTAATATCACAAGTAGCAATGGGTTCGGTGAATGCACTTGTGAAGAAAGCTCTTGATGTT 120
Query 141 GGTGTGAACCATATGATCGTTGGTGCTTATCGAATGGCTATTTCCTCGCTCATTCTGGCT 200
|||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||
Sbjct 121 GGTGTGAACCATATGATCATTGGTGCTTATCGAATTGCTATTTCCTCTTTCATTCTGGCT 180
Query 201 CCTATTGCCTATTTTTTGGAAAGGAAAATAATACCGCAAATAACGTTTAGGCTAATGGTC 260
||||| |||||| ||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 181 CCTATCGCCTATATTTTGGAAAGGGAAATAATACCGGAAATAACGTTTAGGCTAATGGTC 240
Query 261 GATCATTTCATCAGTGGTTTGCTCGGGGCAAGTTTGATGCAATTTTTCTATTTGCTGGGT 320
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||
Sbjct 241 GATCATTTCATCAGTGGATTGCTCGGGGCGAGTTTGATGCAATTTTTCTATTTGCTTGGT 300
Query 321 CTGTCGTATACGTCAGCAACTGTTGCGTGTGCTTTGGTAAGCTTGATGCCTGCAATCACC 380
||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 CTGTCTTACACGTCAGCAACTGTTGCGTGTGCTTTGGTAAGCTTGATGCCTGCAATCACC 360
Query 381 TTCGCTTTCGCTCTTATTTTCAGGACTGAAAAGATAAAAAGTCTAAAG-ACCCAAGCAGG 439
|| ||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||
Sbjct 361 TTTGCTTTCGCTCTTATTTTGAGGACTGAAAAGATAAAAAGTCT-AAGAACCCAAGCAGG 419
Query 440 AATGATAAAAGTGATGGGAACTATCATATGTATAGGTGGAGCTTTGTTCTTAACATTTTA 499
|||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct 420 AATGATAAAAGTGATGGGAACTATTATATGTATAAGTGGAGCTTTGTTCTTAACATTTTA 479
Query 500 CAAAGGCCCTCATATATCAAACTCTCACTCTCACCTACAGGCTCTTCCTCACA-C--CAA 556
||||||||||||||||||||||||||||||||||| | ||||||||||||||| | |||
Sbjct 480 CAAAGGCCCTCATATATCAAACTCTCACTCTCACCAAGAGGCTCTTCCTCACAACAACAA 539
Query 557 CAGCAATCACAACACCAAGAATTGGCTTCTTGGATGTCTCTACTTAACCATAGGAATAAT 616
|||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct 540 CAGCGATCACAACACAAAGAATTGGCTTCTTGGATGTCTCTACTTAACCATAGGAACCGT 599
Query 617 GTTGCTGTCTCTATGGATCTTGTTTCAAGGGACTTTAAACATCAAGTACCCTTGCAAATT 676
|||| | ||||||||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct 600 GTTGATATCTCTATGGATTTTGTTTCAAGGGACTTTAAGCATCAAGTACCCTTGCAAATT 659
Query 677 CTCAAGCACTTGTCTCATGTCAATTTTCGCAGCTTTTCAGTGTGCTCTATTGAGTCTTTA 736
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 660 CTCAAGCACTTGTCTCATGTCAATTTTCGCAGCTTTTCAATGTGCTCTATTGAGTCTTTA 719
Query 737 CAAGAGTAGAGATCTTAAACATTGGATCATCGATGATGGATTTGTGATCGGTGTCATCGT 796
||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 720 CAAGAGTAGAGATGTTAAAGATTGGATCATCGATGATAGATTTGTGATCGGTGTCATCGT 779
Query 797 ATATGCTGGAGTGATAGGACAAGCAATGTCGACTGTAGCAGCGACATGGGGAATAAAGAG 856
||||||||||||||||||||||||||||||||| ||| ||| ||||||||| | ||||
Sbjct 780 ATATGCTGGAGTGATAGGACAAGCAATGTCGACGGTATCAGTGACATGGGGGGTGAAGAA 839
Query 857 ATTAGGAGCTGTTTTCGCATCAGCAATTATGCCAGTTTCTCTAATTTCGGCTACTCTATT 916
||||||||||||||||| |||||||||||||||| | |||| |||||||||| ||||||
Sbjct 840 ATTAGGAGCTGTTTTCGTATCAGCAATTATGCCAATAGCTCTCATTTCGGCTAGTCTATT 899
Query 917 CGATTTCCTAATCTTAGACACTCCTTTATACCTCGGAAGTGTGATTGGATCAGTAGTAAC 976
||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||| ||
Sbjct 900 CGATTTCATAATCTTACACACTCCTTTATACCTCGGAAGTCTGATTGGATCAGTAGGGAC 959
Query 977 AATAATAGGTCTTTACGTGTTCTTGTGGGGTAAGAACAAAGAAATGGAAGCATAA 1031
||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 960 AATAACAGGTCTCTACGTGTTCTTGTGGGGTAAGAACAAAGATATGGAAGCATAA 1014
> AT1G11450.2 | Symbols: | nodulin MtN21 /EamA-like transporter
family protein | chr1:3853467-3855385 FORWARD LENGTH=1035
Length=1035
Score = 1365 bits (739), Expect = 0.0
Identities = 838/886 (95%), Gaps = 6/886 (1%)
Strand=Plus/Plus
Query 171 CGAATGGCTATTTCCTCGCTCATTCTGGCTCCTATTGCCTATTTTTTGGAAAGGAAAATA 230
||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||
Sbjct 1 CGAATGGCTATTTCCTCTTTCATTCTGGTTCCTATCGCCTATTTTTTGGAAAGGAAAATA 60
Query 231 ATACCGCAAATAACGTTTAGGCTAATGGTCGATCATTTCATCAGTGGTTTGCTCGGGGCA 290
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 ATACCGAAAATAACGTTTAGGCTAATGGTCGATCATTTCATCAGTGGTTTGCTCGGGGCG 120
Query 291 AGTTTGATGCAATTTTTCTATTTGCTGGGTCTGTCGTATACGTCAGCAACTGTTGCGTGT 350
|||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||
Sbjct 121 AGTTTGATGCAATTTTTCTATTTGCTTGGTCTGTCCTACACGTCAGCAACTGTTGCGTGT 180
Query 351 GCTTTGGTAAGCTTGATGCCTGCAATCACCTTCGCTTTCGCTCTTATTTTCAGGACTGAA 410
|||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||
Sbjct 181 GCTTTGGTAAGCTTGATGCCTGCAATCACCTTTGCTTTCGCTCTTATTTTGAGAACTGAG 240
Query 411 AAGATAAAAAG-TCTAAAGACCCAAGCAGGAATGATAAAAGTGATGGGAACTATCATATG 469
||||| ||||| |||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct 241 AAGAT-AAAAGATCTAAAGACCCAAGCAGGAATGATAAAAGTGATGGGAACTCTAATATG 299
Query 470 TATAGGTGGAGCTTTGTTCTTAACATTTTACAAAGGCCCTCATATATCAAACTCTCACTC 529
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 300 TATAAGTGGAGCTTTGTTCTTAACATTTTACAAAGGCCCTCATATATCAAACTCTCACTC 359
Query 530 TCACCTACAGGCTCTTCCTCACACCAACAGCAATCACAACACCAAGAATTGGCTTCTTGG 589
||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct 360 TCACCTAGAGGCTCTTCCTCACAACAACAGCGATCACAACACCAAGAATTGGCTTCTTGG 419
Query 590 ATGTCTCTACTTAACCATAGGAATAATGTTGCTGTCTCTATGGATCTTGTTTCAAGGGAC 649
||||||||||||| ||||||||| ||||||| ||||||||||| ||||||||||||||
Sbjct 420 ATGTCTCTACTTAGTCATAGGAATCGTGTTGCTATCTCTATGGATATTGTTTCAAGGGAC 479
Query 650 TTTAAACATCAAGTACCCTTGCAAATTCTCAAGCACTTGTCTCATGTCAATTTTCGCAGC 709
||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 480 TTTAAGCATCAAGTATCCTTGCAAATTCTCAAGCACTTGTCTCATGTCAATTTTCGCAGC 539
Query 710 TTTTCAGTGTGCTCTATTGAGTCTTTACAAGAGTAGAGATCTTAAACATTGGATCATCGA 769
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 540 TTTTCAATGTGCTCTATTGAGTCTTTACAAGAGTAGAGACCTTAAACATTGGATCATCGA 599
Query 770 TGATGGATTTGTGATCGGTGTCATCGTATATGCTGGAGTGATAGGACAAGCAATGTCGAC 829
|||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct 600 CGATGGATTTGTGATTGGTGTCATAATATATGCTGGAGTGATAGGACAAGCAATGTCGAC 659
Query 830 TGTAGCAGCGACATGGGGAATAAAGAGATTAGGAGCTGTTTTCGCATCAGCAATTATGCC 889
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 660 TGTAGCAGCGACATGGGGAATAAACAGATTAGGAGCTGTTTTCGCATCAGCAATTATGCC 719
Query 890 AGTTTCTCTAATTTCGGCTACTCTATTCGATTTCCTAATCTTAGACACTCCTTTATACCT 949
||||||||| || ||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct 720 AGTTTCTCTCATATCGGCTACTCTATTCGATTTCCTTATCTTACACACTCCTTTATACCT 779
Query 950 CGGAAGTGTGATTGGATCAGTAGTAACAATAATAGGTCTTTACGTGTTCTTGTGGGGTAA 1009
||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct 780 CGGAAGTGTGATTGGATCAGTAGGGACAATAATAGGTCTCTACGTGTTCTTGTGGGGTAA 839
Query 1010 GAACAAAGAAATGGAAGCA----TAACTACATTGTCTTCTCGGATG 1051
||||||||||| ||||||| |||||||||||||||||||||||
Sbjct 840 GAACAAAGAAACGGAAGCAGACATAACTACATTGTCTTCTCGGATG 885
> AT1G01070.1 | Symbols: | nodulin MtN21 /EamA-like transporter
family protein | chr1:38752-40944 REVERSE LENGTH=1311
Length=1311
Score = 1075 bits (582), Expect = 0.0
Identities = 898/1049 (86%), Gaps = 27/1049 (3%)
Strand=Plus/Plus
Query 13 AGAGAGAGATGAG-T-GAGGATATGGGAGGAGTGAAAGTAGTCTCAAAATGGCCACCGGT 70
||||||| ||| | | || |||||| |||||||| |||||| ||||| |||||||
Sbjct 60 AGAGAGATATG-GCTGGA-GATATGCAAGGAGTGAGAGTAGTAGAAAAATATTCACCGGT 117
Query 71 TATAGTTATGGTGACATCACAA-GTAGCGATGGGCTCGGTGAATGCACTTGTGAAGAAAG 129
||||| ||||||| ||| || ||||||||||| |||||||||||||||||||||||||
Sbjct 118 CATAGTGATGGTGATGTCA-AATGTAGCGATGGGTTCGGTGAATGCACTTGTGAAGAAAG 176
Query 130 CTCTCGATGTTGGTGTGAACCATATGATCGTTGGTGCTTATCGAATGGCTATTTCCTCGC 189
|||| ||||||||||||||||||||| || |||||||||||||||||||||||||| |
Sbjct 177 CTCTTGATGTTGGTGTGAACCATATGGTCATTGGTGCTTATCGAATGGCTATTTCCGCTT 236
Query 190 TCATTCTGGCT-CCTATTGCCTATTTTTTGGAAAGGAAAATAATACCGCAAATAACGTTT 248
| ||| ||| | ||| |||||||| | ||||||||||||| || ||| ||||||||||||
Sbjct 237 TAATTTTGGTTCCCT-TTGCCTATGTCTTGGAAAGGAAAACAAGACCACAAATAACGTTT 295
Query 249 AGGCTAATGGTCGATCATTTCATCAGTGG-TTTGCTCGGGGCAAGTTTGATGCAATTTTT 307
||||||||||||||||||||| ||||||| || |||||||| ||||||||||| |||||
Sbjct 296 AGGCTAATGGTCGATCATTTCGTCAGTGGCCTT-CTCGGGGCGAGTTTGATGCAGTTTTT 354
Query 308 CTATTTGCTGGGTCTGTCGTATACGTCAGCAACTGTTGCGTGTGCTTTGGTAAGCTTGAT 367
|| |||||| ||||||||||| ||||||||||||||| ||||||||||||||||| || |
Sbjct 355 CTTTTTGCTTGGTCTGTCGTACACGTCAGCAACTGTTTCGTGTGCTTTGGTAAGCATGTT 414
Query 368 GCCTGCAATCACCTTCGCTTTCGCTCTTATTTTCAGGACTGAAAA-GATAAAAAGTCTAA 426
||||||||||||||||||||| || |||||||||||||||||||| | | || | |||||
Sbjct 415 GCCTGCAATCACCTTCGCTTTGGCCCTTATTTTCAGGACTGAAAATG-TGAAGATTCTAA 473
Query 427 AGACCCAAGCAGGAATGATAAAAGTGATGGGAACTATCATATGTATAGGTGGAGCTTTGT 486
||||| ||||||||||| | || ||||| |||||| | || |||||| ||||||||||||
Sbjct 474 AGACCAAAGCAGGAATGTTGAAGGTGATTGGAACTTTGATCTGTATAAGTGGAGCTTTGT 533
Query 487 TCTTAACATTTTACAAAGGCCCTCATATATCAAACTCTCACTCTCAC-CT-ACAG-GCT- 542
|||||||||||||||||||||| || ||||||||||||||||||||| || || | |
Sbjct 534 TCTTAACATTTTACAAAGGCCCACAAATATCAAACTCTCACTCTCACTCTCACGGTGGGG 593
Query 543 CTTCCTCACACCAACAGCAATCACA-ACA---CCAAGAATTGGCTTCTTGGATGTCTCTA 598
||||| |||| ||||| | |||| | ||| |||| |||||||||||||||||||| ||
Sbjct 594 CTTCC-CACAACAACAACGATCA-AGACAAGGCCAATAATTGGCTTCTTGGATGTCTTTA 651
Query 599 CTTAACCATAGGAATAATGTTGCTGTCTCTATGGATCTTGTTTCAAGGGACTTTAAACAT 658
||||||||||||| | ||||||| ||||||||||| ||||||||||||||||||| ||
Sbjct 652 TTTAACCATAGGAACAGTGTTGCTATCTCTATGGATGTTGTTTCAAGGGACTTTAAGTAT 711
Query 659 CAAGTACCCTTGCAAATTCTCAAGCACTTGTCTCATGTCAATTTTCGCAGCTTTTCAGTG 718
|||||||||||||||| ||| ||||||||||| |||||||||||||| || ||||| ||
Sbjct 712 TAAGTACCCTTGCAAATACTCGAGCACTTGTCTTATGTCAATTTTCGCGGCATTTCAATG 771
Query 719 TGCTCTATTGAGTCTTTACAAGAGTAGAGATC-TTAAACATTGGATCATCGATGATGGAT 777
|||||| ||||| ||||||||||| ||||| | |||| |||||||||| |||||| |||
Sbjct 772 TGCTCTCTTGAGCCTTTACAAGAGCAGAGA-CGTTAATGATTGGATCATAGATGATAGAT 830
Query 778 TTGTGATCGGTGTCATCGTATATGCTGGAGTGATAGGACAAGCAATGTCGACTGTAGCAG 837
| || ||| |||||| |||| ||||||||| |||||||||||||| |||| || |||
Sbjct 831 TCGTTATCACCGTCATCATATACGCTGGAGTGGTAGGACAAGCAATGACGACGGTTGCAA 890
Query 838 CGACATGGGGAAT-AAAGAGATTAGGAGCTGTTTTCGCATCAGCAATTATGCCAGTTTCT 896
| |||||||| || ||| | |||||||||||| |||||||| || || | ||| || ||
Sbjct 891 CAACATGGGGGATTAAAAA-ATTAGGAGCTGTGTTCGCATCGGCGTTTTTCCCACTTACT 949
Query 897 CTAATTTCGGCTACTCTATTCGATTTCCTAATCTTAGACACTCCTTTATACCTCGGAAGT 956
|| ||||||||||||||||| |||||||| || ||| |||||||||||||||| ||||||
Sbjct 950 CTCATTTCGGCTACTCTATTTGATTTCCTCATTTTACACACTCCTTTATACCTTGGAAGT 1009
Query 957 GTGATTGGATCAGTAGTAACAATAATAGGTCTTTACGTGTTCTTGTGGGGTAAGAACAAA 1016
|||||||||||| |||| || |||| ||||| ||| ||||||||||||| |||||||||
Sbjct 1010 GTGATTGGATCACTAGTGACCATAACGGGTCTCTACATGTTCTTGTGGGGGAAGAACAAA 1069
Query 1017 GAAATGGAAGCAT-AACTACATTGTCTTC 1044
|||| |||| ||| |||| ||||||||||
Sbjct 1070 GAAACGGAATCATCAACTGCATTGTCTTC 1098
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 51540234822
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5