BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg920029
Length=1741
Score E
Sequences producing significant alignments: (Bits) Value
AT1G12000.1 | Symbols: | Phosphofructokinase family protein | ... 2850 0.0
AT4G04040.1 | Symbols: MEE51 | Phosphofructokinase family prote... 1000 0.0
> AT1G12000.1 | Symbols: | Phosphofructokinase family protein
| chr1:4049896-4053835 REVERSE LENGTH=2072
Length=2072
Score = 2850 bits (1543), Expect = 0.0
Identities = 1664/1724 (97%), Gaps = 2/1724 (0%)
Strand=Plus/Plus
Query 19 CAATGGCTCCTGCTCTTGCCGTTACCCGAGATCTAACCGCCGCCGGATCTCTGGAGAATG 78
||||||| |||||||| |||||||| |||||||| ||||||| |||||||| ||||||||
Sbjct 107 CAATGGCCCCTGCTCTCGCCGTTACACGAGATCTCACCGCCGTCGGATCTCCGGAGAATG 166
Query 79 CTCCGGCGAAAGGACGTGCTTCGGTTTACAGTGAAGTTCAATCAAGCCGTATCAACAACG 138
|||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 167 CTCCTGCGAAAGGACGTGCTTCGGTTTACAGTGAAGTTCAATCAAGCCGTATTAACAACA 226
Query 139 CTCTTCCTTTGCCTTCTGTTCTTAAAGGAGCTTTCAAAATCGTCGAAGGTCCTGCTAGTT 198
|||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 227 CTCTTCCTTTGCCTTCTGTTCTCAAAGGAGCTTTCAAAATCGTCGAAGGTCCCGCTAGTT 286
Query 199 CCGCCGCCGGGAATCCAGAGGAGATAGCGAAGTTGTTTCCGGGTCTATATGGCCAGCCAT 258
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 287 CCGCCGCCGGGAATCCAGATGAGATAGCGAAGTTGTTTCCGGGTCTATATGGCCAGCCAT 346
Query 259 CTGTAGCAGTGGTTCCAGATCA-GAGTGCATCTTTATCGGCACCGAAATTGAAGATTGGT 317
| |||||||||||||||||||| || |||| ||| ||||||||||||||||||||||||
Sbjct 347 CAGTAGCAGTGGTTCCAGATCAGGA-TGCACCTTCGTCGGCACCGAAATTGAAGATTGGT 405
Query 318 GTTGTTTTGTCTGGAGGTCAGGCGCCTGGTGGGCACAATGTTATATCTGGACTGTTTGAT 377
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct 406 GTTGTTTTGTCTGGAGGTCAGGCACCTGGTGGGCACAATGTTATTTCTGGACTGTTTGAT 465
Query 378 TACCTGCAAGAGCGTGCGAAAGGTAGTACGTTTTACGGGTTCAAGGGTGGTCCAGCTGGT 437
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct 466 TACCTGCAAGAGCGTGCGAAAGGTAGCACATTTTACGGGTTCAAGGGTGGTCCAGCTGGT 525
Query 438 ATCATGAAATGCAAATATGTTGAGTTGAATGCTGAATATATTCATCCTTACAGAAACCAG 497
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 526 ATCATGAAATGCAAATATGTTGAGTTGAATGCTGAATATATTCAGCCTTACAGAAACCAG 585
Query 498 GGTGGTTTTGACATGATCTGCAGTGGAAGAGACAAGATTGAAACACCTGACCAGTTCAAA 557
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 586 GGTGGTTTTGACATGATCTGCAGTGGAAGAGACAAGATTGAAACACCTGACCAGTTTAAA 645
Query 558 CAAGCTGAAGAAACAGCAAAGAAGCTAGATTTGGATGGATTGGTTGTTATCGGTGGAGAT 617
|||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||
Sbjct 646 CAAGCTGAAGAAACAGCAAAGAAGCTTGATTTGGATGGGTTGGTGGTTATCGGTGGAGAT 705
Query 618 GACTCCAACACCAATGCTTGTCTCCTTGCTGAAAACTTCAGGAGTAAGAACTTGAAAACC 677
|| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct 706 GATTCCAACACCAATGCTTGCCTTCTTGCTGAAAACTTCAGGAGTAAGAACTTGAAAACC 765
Query 678 CGAGTCATTGGTTGCCCCAAGACCATTGATGGTGATTTGAAATGCAAAGAGGTTCCTACT 737
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 766 CGAGTCATTGGGTGCCCCAAGACCATTGATGGTGATTTGAAATGCAAAGAGGTTCCTACT 825
Query 738 AGTTTTGGGTTTGACACAGCTTGCAAGATTTACTCTGAAATGATTGGAAATGTCATGATT 797
|||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct 826 AGTTTTGGGTTTGATACAGCTTGCAAGATTTACTCTGAAATGATCGGAAACGTCATGATT 885
Query 798 GATGCAAGGTCAACTGGAAAGTACTATCATTTTGTACGTCTTATGGGTCGTGCTGCTTCC 857
||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct 886 GATGCAAGGTCGACTGGAAAGTACTATCATTTTGTAAGACTTATGGGTCGTGCTGCTTCC 945
Query 858 CACATTACGCTTGAGTGTGCTTTACAAACTCACCCAAACATAACAATTATTGGAGAAGAG 917
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 946 CACATTACGCTTGAGTGTGCTTTACAAACTCACCCAAACATAACCATTATTGGAGAAGAG 1005
Query 918 GTTTCTGCCCAGAAGCAGACTTTGAAGAATGTCACAGACTACATGGTAGATGTTATCTGC 977
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1006 GTTTCTGCCCAGAAGCAGACTTTGAAGAATGTCACAGACTACATGGTGGATGTTATCTGC 1065
Query 978 AAACGTGCTGAACTTGGTTACAACTACGGTGTCATACTGATCCCAGAAGGCCTGATCGAC 1037
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct 1066 AAACGTGCTGAACTTGGTTACAACTACGGTGTCATACTGATTCCAGAAGGTCTGATCGAC 1125
Query 1038 TTTATTCCTGAGGTCCAAGAGCTGATTGCAGAACTGAATGAAATTCTGGCAAATGAGGTT 1097
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 1126 TTTATTCCTGAGGTCCAAGAGCTCATTGCTGAACTGAATGAAATTCTGGCAAATGAGGTT 1185
Query 1098 GTCGATGAAAATGGTCTGTGGAAGAAGAAGCTCACCGAGCAATCCCTGAAGCTGTTTGAT 1157
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1186 GTCGATGAAAATGGTTTGTGGAAGAAGAAGCTCACCGAGCAATCCCTGAAGCTGTTTGAT 1245
Query 1158 CTTCTGCCTGAAGCAATTCAGGAACAGCTGATGCTTGAGAGAGACCCACACGGAAATGTC 1217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1246 CTTCTGCCTGAAGCAATTCAGGAACAGCTGATGCTTGAGAGAGACCCACACGGAAATGTC 1305
Query 1218 CAGGTGGCTAAGATTGAGACTGAGAAGATGCTTATTCAAATGGTTGAAACTGAATTGGAG 1277
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1306 CAGGTTGCTAAGATTGAGACTGAGAAGATGCTTATTCAAATGGTTGAAACTGAATTGGAG 1365
Query 1278 AAAAGAAAGCAAGCTGGTGCATACAAGGGACAATTCATGGGACAATCTCATTTCTTTGGC 1337
|||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||
Sbjct 1366 AAAAGAAAGCAAGCTGGTGCATACAAGGGACAATTCATGGGACAGTCACATTTCTTCGGG 1425
Query 1338 TATGAAGGAAGATGCGGCTTGCCCACAAATTTTGATGCCACATACTGTTATGCACTCGGC 1397
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1426 TATGAAGGAAGATGCGGCTTGCCCACAAATTTTGATGCCACATACTGTTATGCACTTGGT 1485
Query 1398 TATGGCGCTGGAGTACTCCTCAACAGTGGGAAGACTGGACTAATTTCTTCGGTCGGGAAC 1457
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 1486 TATGGCGCTGGAGTACTCCTCAACAGTGGGAAGACCGGACTAATTTCTTCGGTTGGGAAC 1545
Query 1458 TTGGCTGCTCCTGTGGAAGAATGGACTGTAGGTGGGACTGCTCTCACAGCCTTGATGGAT 1517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1546 TTGGCTGCTCCTGTGGAAGAATGGACTGTAGGTGGGACTGCTCTCACAGCCTTGATGGAT 1605
Query 1518 GTCGAGAGGAGACACGGTAAGTTCAAGCCTGTGATCAAGAAAGCAATGGTGGAACTTGAA 1577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1606 GTCGAGAGGAGACACGGTAAGTTCAAGCCTGTGATCAAGAAAGCAATGGTGGAACTTGAA 1665
Query 1578 GGTGCACCGTTTAAGAAATTTGCATCGCTGCGTGAGGAATGGGCATTGAATAACCGATAC 1637
|||||||| ||||||||||| ||||| |||||||| |||||||||||||| |||||||||
Sbjct 1666 GGTGCACCATTTAAGAAATTCGCATCACTGCGTGAAGAATGGGCATTGAAGAACCGATAC 1725
Query 1638 ATCAGCCCAGGTCCGATCCAATTCAGTGGACCTGGTTCAGACGCTCTCAGCCACACTCTA 1697
||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct 1726 ATCAGCCCAGGTCCGATCCAATTCACTGGACCTGGTTCAGACTCTCTCAGCCACACTCTA 1785
Query 1698 CTTCTTGAACTCGGGGCTCAATAGTCTCTCGACTAACCACCATT 1741
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1786 CTTCTTGAACTCGGGGCTCAATAGTCTCTCGACTAACCACCATT 1829
> AT4G04040.1 | Symbols: MEE51 | Phosphofructokinase family protein
| chr4:1939250-1942954 FORWARD LENGTH=1899
Length=1899
Score = 1000 bits (541), Expect = 0.0
Identities = 1303/1665 (78%), Gaps = 76/1665 (5%)
Strand=Plus/Plus
Query 94 GTG-CTTCGGTTTACAGTGAAGTTCAATCAAGCCGTATCAACAACGCTCTTCCT-TTGCC 151
||| |||| || ||||| ||||| ||| | || |||||| || || | |||||| || ||
Sbjct 76 GTGACTTCTGTATACAGCGAAGTCCAAGCTAGTCGTATCGACCACACACTTCCTCTT-CC 134
Query 152 TTCTGTTC-TTAAAGGAGCTTTCAAAATCGTCGAAGGTCCTGCTAGTTCCGCCGCCGGGA 210
||| | || ||||| ||||||| ||| |||| |||||| | || ||| ||||| |||
Sbjct 135 TTCCG-TCTTTAAAACCCCTTTCAAGATCATCGATGGTCCTCCAAGCTCCTCCGCC-GGA 192
Query 211 -ATCCAGAGGAGATAGCGAAGTTGTTTCCGGGTCTATATGGCCAGCCATCTG-TAGCAGT 268
|||||||||| || | ||| || || || | ||| ||| || ||||| | | | |
Sbjct 193 CATCCAGAGGAAATTGAGAAATTATTCCCTAATTTATTTGGACAACCATCAGCT-TTATT 251
Query 269 GGTTCC--A--GATCAGAGTGCATCTTT-ATCGGCACCGAAA--TTGAAGATTGGTGTTG 321
|||||| | ||| | || | ||| ||||| | | ||| || |||||||||||||
Sbjct 252 GGTTCCTAACCAATC-TAATG-AAGTTTCATCGG-ATCAAAAGCTT-AAGATTGGTGTTG 307
Query 322 TTTTGTCTGGAGGTCAGGCGCCTGGTGGGCACAATGTTATATCTGGACTGTTTGATTACC 381
| |||||||| ||||| || ||||| || ||||||||||| | |||| | |||||||||
Sbjct 308 TGTTGTCTGGTGGTCAAGCACCTGGAGGACACAATGTTATTTGTGGAATCTTTGATTACT 367
Query 382 TGCAAGAGCGTGCGAA-AGGTAGTACGT-T-TTACGGGTTCAAG-GGTGGTCCAGCTGGT 437
||||||| ||| || ||| |||| || | || |||| | || |||||||||||
Sbjct 368 TGCAAGAATATGC-AAGAGGAAGTA-GTCTGTT--TGGTTTTCGTGGCGGTCCAGCTGGA 423
Query 438 ATCATGAAATGCAAATATGTTGAG-TTGAATGCTGAATATAT-TCATCCTTACAGAAACC 495
|||||||| | |||||| ||||| || | | |||| | | | | | ||||| |||||||
Sbjct 424 ATCATGAAGGGGAAATATATTGAGCTT-ACTTCTGAGTTTGTGT-ACCCTTATAGAAACC 481
Query 496 AGGGTGGTTTTGACATGATCTGCAGTGGAAGAGACAAGATTGAAACACCTGACCAGTTCA 555
||||||| ||||| ||||| || ||||||||||||||||||||||| || || ||||| |
Sbjct 482 AGGGTGGATTTGATATGATATGTAGTGGAAGAGACAAGATTGAAACTCCAGAGCAGTTTA 541
Query 556 AACAAGCTGAAGAAACAG-CAAAGAAGCTAGATTTGGATGGAT-TGGTTGTTATCGGTGG 613
| ||||||||||| || | | | ||| | ||||| ||||| | | || || || |||||
Sbjct 542 AGCAAGCTGAAGAGACTGTTACA-AAGATGGATTTAGATGG-TCTTGTGGTAATTGGTGG 599
Query 614 AGATGACTCCAACACCAATGCTTGTCTCCTTGCTGAAAACTTCAGGAG-TAAGAACTTGA 672
|||||||||||| || ||||||||||||||||||||| |||| | ||| ||| ||| |||
Sbjct 600 AGATGACTCCAATACTAATGCTTGTCTCCTTGCTGAACACTTTA-GAGCTAAAAACATGA 658
Query 673 AAAC-CCGAGTCATTGGTTGCCCCAAGACCATTGATGGTGATTTGAAA-TGCAAAGAGGT 730
|||| | | || ||||| ||||| ||||| || ||||||||||| ||| ||||||| ||
Sbjct 659 AAACTCTG-GTTATTGGATGCCCTAAGACAATCGATGGTGATTT-AAAGAGCAAAGAAGT 716
Query 731 TCCTACTAGTTTTGGGTTTGACACAGCTTGCAAGATTTACTCTGAAATGATTGGAAATGT 790
|| || ||||| |||||||| || ||||||||||| ||||| |||||||||||||||||
Sbjct 717 CCCCACGAGTTTCGGGTTTGATACTGCTTGCAAGATATACTCAGAAATGATTGGAAATGT 776
Query 791 CATGATTGATGCAAGGTCAACTGGAAAGTACTATCATTTTGTACGTCTTATGGGTCGTGC 850
||||| ||||| | || || ||||| |||||||| ||||| |||||||||||||||||
Sbjct 777 TATGATCGATGCGCGTTCCACGGGAAAATACTATCACTTTGTGCGTCTTATGGGTCGTGC 836
Query 851 TGCTTCCCACATTACGCTTGAGTGTGCTTTACAAACTCACCCAAACATAACAATTATTGG 910
|||||| |||||||| ||||| || ||||| ||||| || |||||||| || ||||||||
Sbjct 837 TGCTTCTCACATTACACTTGAATGCGCTTTGCAAACCCATCCAAACATTACCATTATTGG 896
Query 911 AGAAGAGGTTTCTGCCCAGAAGCAGACTTTGAAGAATGTCACAGACT-ACATGGTAGATG 969
||||||||||| || |||||| || ||||| ||||| ||||| | |||| || ||||
Sbjct 897 AGAAGAGGTTTTTGAGAAGAAGCTTACGTTGAAAAATGTTACAGA-TAACATTGTTGATG 955
Query 970 TTATCTGCAAACGTGCTGAACTTGGTTACAACTACGGTGTCATAC-TGATCCCAGAAGGC 1028
| |||| ||||| || ||| |||||| |||||||||||||| | || | || |||||
Sbjct 956 TGATCTATAAACGAGCAGAAAATGGTTATAACTACGGTGTCATTCTTG-TTCCTGAAGGT 1014
Query 1029 CTGATCGACTTTATTCCTGAGGTCCAAGAGCTGATTGCAGAACTGAATGAAATTC-T-GG 1086
|| || || ||||| |||||||||||| |||| ||| | |||||||||| || || | |
Sbjct 1015 CTAATTGATTTTATCCCTGAGGTCCAACAGCTTATTTCCGAACTGAATG-AAGTCTTAGC 1073
Query 1087 CAAATGAGGTTGTCGATGAA-AATGGTCTGTGGAAGAAGAAGC-TCACCGAGCAATCCCT 1144
| || || ||||||||| || || | ||||||||||| | | | || | | |
Sbjct 1074 CGAAGGA-AACGTCGATGAAGAA-GGCCAATGGAAGAAGAATCTTAAAAAAG--AGACTT 1129
Query 1145 GA-AGCTGTTTGA-TCTTCTGCCTGAAGCAATTCAGGAACAGCTGATGCTTGAGAGAGAC 1202
| || | ||||| | |||| ||| || | ||||| ||||| || ||||||||||||||
Sbjct 1130 TAGAGATTTTTGAGT-TTCTTCCTCAAACTATTCAAGAACAACTAATGCTTGAGAGAGAT 1188
Query 1203 CCACACGGAAATGTCCAGGTGGCTAAGATTGAGACTGAGAAGATGCTT-ATTCAAATGGT 1261
||||| |||||||| ||||| ||||| || ||||| ||||| ||| || |||||||||||
Sbjct 1189 CCACATGGAAATGTGCAGGTTGCTAAAATAGAGACAGAGAAAATG-TTGATTCAAATGGT 1247
Query 1262 TGAAACTGAATTGGAG-AAAAGAAAGCA-AGCTGGTGCATA-CAAGGGAC-AATTCAT-G 1316
|||||| || | ||| ||||| ||| | || ||| |||| || | | | ||||| |
Sbjct 1248 TGAAACCGAGCTAGAGAAAAAG-AAG-ACAGAGGGTACATATGAA-CG-CGAGTTCATGG 1303
Query 1317 GGACAATCTCATTTCTTTGGCTATGAAGGAAGATGCGGCTTGCCCACAAATTTTGATGCC 1376
||| |||| || |||||||| |||||||||||||||||||| || |||||||| |||||
Sbjct 1304 GGA-AATCACACTTCTTTGGGTATGAAGGAAGATGCGGCTTACCTACAAATTTCGATGCA 1362
Query 1377 ACATACTGTTATGCACTCGGCTATGGCGCTGGAGT-ACTCCTCAACAGTGGGAAGACTGG 1435
|| ||||| || ||| | || || || |||||| | ||| ||| | || || ||||| ||
Sbjct 1363 ACTTACTGCTACGCATTAGGTTACGGTGCTGGA-TCACTTCTCCAGAGCGGAAAGACCGG 1421
Query 1436 ACTAATTTCTTCGGTCGGGAACTTGGCTGCTCCTGTGGAAGAATGGACTGTAGGTGGGAC 1495
| ||||||| ||||| || ||||||||||||||||| ||||| ||||| || ||||| ||
Sbjct 1422 ATTAATTTCATCGGTTGGAAACTTGGCTGCTCCTGTTGAAGAGTGGACAGTTGGTGGTAC 1481
Query 1496 TGCTCTCACAGCCTTGATGGATGTCGAGAGGAGACACGGTAAGTTCAAGCCTGTGATCAA 1555
||| || || | ||||||||||| ||||| ||||| ||||| ||||||||||| |||||
Sbjct 1482 TGCACTGACTTCGTTGATGGATGTTGAGAGAAGACATGGTAAATTCAAGCCTGTTATCAA 1541
Query 1556 GAAAGCAATGGTGGAACTTGAAGGTGCACCGTTTAAGAAATTTGCATCGCTGCGTGAGGA 1615
|||||| ||||| ||||||||||||||||||||||||||||||||||| | ||| || ||
Sbjct 1542 GAAAGCTATGGTTGAACTTGAAGGTGCACCGTTTAAGAAATTTGCATCACAGCGAGAAGA 1601
Query 1616 ATGGGCATTGAATAACCGATACATCAGCCCAGGTCCGATCCAATTCA-GTGGACCTGGTT 1674
|||||| ||||| || |||||||| || || ||||| || || || | | ||||| || |
Sbjct 1602 ATGGGCTTTGAAGAATCGATACATTAGTCCTGGTCCAATTCAGTTTAAG-GGACCGGGAT 1660
Query 1675 CAGACGCTCTCAGCCACAC-TCTACTTCTTGAACTCGGGGCTCAA 1718
| || || | ||||| | || | || |||||||||||||||
Sbjct 1661 CTGATGCGAGAAATCACACAT-TAATGCTCGAACTCGGGGCTCAA 1704
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 86093934675
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5