BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg920055
Length=2692
Score E
Sequences producing significant alignments: (Bits) Value
AT1G12210.1 | Symbols: RFL1 | RPS5-like 1 | chr1:4140948-414360... 4145 0.0
AT1G12220.1 | Symbols: RPS5 | Disease resistance protein (CC-NB... 1391 0.0
AT1G12280.1 | Symbols: | LRR and NB-ARC domains-containing dis... 1312 0.0
AT4G14610.1 | Symbols: | pseudogene, disease resistance protei... 1131 0.0
> AT1G12210.1 | Symbols: RFL1 | RPS5-like 1 | chr1:4140948-4143605
FORWARD LENGTH=2658
Length=2658
Score = 4145 bits (2244), Expect = 0.0
Identities = 2529/2666 (95%), Gaps = 22/2666 (1%)
Strand=Plus/Plus
Query 21 ATGGGAGGTTGTATCTCTGTCTCGTTGTCATGTGATCGAGTAGTGAATCAGATTTCTCAG 80
||||| |||||| |||| |||||||||||||||||||||| |||||||||| |||| |||
Sbjct 1 ATGGGCGGTTGTGTCTCGGTCTCGTTGTCATGTGATCGAGAAGTGAATCAGTTTTCACAG 60
Query 81 TGTTTATGTGTCAGTGGTAATTATATTCATAACCTCTCTGAGAATCTGGCTTCTCTGCAG 140
|| |||||||||||||| | |||||| || ||||| ||||||||||||||||| ||||||
Sbjct 61 TGGTTATGTGTCAGTGGGAGTTATATCCAAAACCTATCTGAGAATCTGGCTTCCCTGCAG 120
Query 141 AAAGCCATGGGAGTGCTCAAGGCTAAGCGAGATGACGTGCAAGGAAGGGTAGATAGAGAA 200
|||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||
Sbjct 121 AAAGCCATGGGAGTGCTCAACGCTAAGCGAGATGACGTGCAAGGAAGGATAAATAGAGAA 180
Query 201 GAGTTTACTGGGCATCGTCGAAGGCTTGCTCAAGTCCAGGTATGGCTTACACGTATCCTA 260
|||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |
Sbjct 181 GAGTTTACTGGGCATCGTAGAAGGCTTGCTCAAGTTCAGGTATGGCTTACACGTATCCAA 240
Query 261 ACCATCGAAAACCAATTCAATGATCTT-CTTAGCACTTGTAACGCTGAGATTCAAAGGTT 319
|||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||
Sbjct 241 ACCATCGAAAACCAATTCAATGAT-TTGCTTAGCACTTGTAACGCTGAGATACAAAGGTT 299
Query 320 GTGTCTCTGTGGTTTTTGCTCTAAAAATATGAAAATGAGCTATCTTTATGGGAAAAGAGT 379
|||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||
Sbjct 300 GTGTCTCTGTGGATTTTGCTCTAAAAATGTGAAAATGAGCTATCTTTATGGGAAAAGGGT 359
Query 380 TATTGTGTTGTTGAGGGAGGTTGAGGGTCTCAGCTCTCAAGGAGAATTTGATGTGGTGAC 439
|||||| || |||||||||||||||||||| || |||||||||| ||||||| | |||||
Sbjct 360 TATTGTCTTATTGAGGGAGGTTGAGGGTCTTAGTTCTCAAGGAGTATTTGATATAGTGAC 419
Query 440 TGAGGCAACTCCGATAGCTGAGGTTGAAGAGTTGCCTATTCAATCCACAATTGTTGGTCA 499
||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 TGAGGCAGCTCCTATAGCTGAGGTTGAAGAGTTGCCTATTCAATCCACAATTGTTGGTCA 479
Query 500 GGATTCGATGCTCGACAAGGTATGGAACTGTCTAATGGAAGATAAAGTCGGGATTGTGGG 559
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 480 GGATTCGATGCTCGACAAGGTATGGAACTGTCTAATGGAAGATAAAGTTTGGATTGTGGG 539
Query 560 TCTGTATGGTATGGGTGGAGTAGGAAAAACCACCCTTCTCACGCAGATCAACAATAAGTT 619
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 540 TCTGTATGGTATGGGTGGAGTAGGCAAAACCACCCTTCTCACGCAGATCAACAATAAGTT 599
Query 620 TTCTAAACTAGGTGGTGGATTTGATGTCGTGATATGGGTTGTGGTGTCTAAAAATGCAAC 679
||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct 600 TTCTAAACTAGGTGGTGGATTTGATGTCGTGATATGGGTCGTGGTGTCTAAAAACGCAAC 659
Query 680 AGTACATAAGATTCAAAGAAGCATCGGGGAAAAACTAGGCCTTGTTGGGAAGAAGTGGGA 739
||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct 660 AGTACATAAGATTCAAAAAAGCATCGGGGAAAAACTAGGCCTTGTTGGGAAGAATTGGGA 719
Query 740 CGAGAAAAACAAAAACCAGAGAGCCCTTGACATCCACAACGTTCTTAGGAGGAAGAAGTT 799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 720 CGAGAAAAACAAAAACCAGAGAGCCCTTGACATCCACAACGTTCTTAGGAGGAAGAAATT 779
Query 800 TGTCTTGTTGTTGGATGATATATGGGAAAAAGTGAACTTAAATGTGATTGGAGTCCCGTA 859
||| ||||||||||||||||||||||| |||||| | ||||| |||||||||||||||||
Sbjct 780 TGTGTTGTTGTTGGATGATATATGGGAGAAAGTGGAGTTAAAGGTGATTGGAGTCCCGTA 839
Query 860 TCCGAGTGGAGAAAACGGATGCAAAGTAGCATTCACCACTCGTTCTAAGGAAGTTTGTGG 919
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 840 TCCGAGTGGAGAAAACGGATGCAAAGTAGCATTCACCACTCATTCTAAGGAAGTTTGTGG 899
Query 920 ACGCATGGGGGTAGATGACCCGATGGAAGTCAGTTGTTTAGACACCAGAAACGCCTGGGA 979
|||||||||||||||| ||||||||||| |||||||| | ||||| ||||||| |||||
Sbjct 900 ACGCATGGGGGTAGATAACCCGATGGAAATCAGTTGTCTGGACACTGGAAACGCTTGGGA 959
Query 980 TTTGTTGAAAAAGAAAGTGGGGGAAAACACATTAGGAAGCCACCCAGACATTCCCCAGCT 1039
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 960 TTTGTTGAAAAAGAAAGTGGGGGAAAACACATTAGGAAGCCACCCAGACATTCCCCAGCT 1019
Query 1040 TGCACGCAAAGTTTCGGAAAAATGTCGTGGTCTACCACTAGCACTGAATGTTC-TTGGTG 1098
|||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||
Sbjct 1020 AGCACGCAAAGTTTCGGAAAAATGTTGTGGTCTACCACTAGCACTGAATGT-CATTGGTG 1078
Query 1099 AGACCATGTCATGCAAGAGGACAATACAAGAATGGTGTCATGCAATTGAGGTTTTGACTT 1158
|||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct 1079 AGACCATGTCATTCAAGAGGACAATACAAGAATGGCGTCATGCAACTGAGGTTTTGACTT 1138
Query 1159 CATCTGCTACAGATTTTTCAGGAATGGAAGATGAGGTTCTTCCAATTTTAAAATATAGCT 1218
| | |||||||||||||| || ||||||||||| ||||||||||||||||||||||||
Sbjct 1139 C-T--GCTACAGATTTTTCTGGCATGGAAGATGAAATTCTTCCAATTTTAAAATATAGCT 1195
Query 1219 ATGATAGCTTGAATGGGGAGGATGCAAAGTCGTGTTTCCTATATTGCTCTCTATTTCCTG 1278
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1196 ATGATAGCTTGAATGGGGAGGATGCGAAGTCGTGTTTCCTATATTGCTCTCTATTTCCTG 1255
Query 1279 AAGATTTTAAAATCAGAAAAGAGATGTTTATTGAATACTGGATTTGTGAGGGATTCATAG 1338
|||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1256 AAGATTTTGAAATCAGAAAAGAGATGCTTATTGAATACTGGATTTGTGAGGGATTCATAA 1315
Query 1339 AAGAAAAGCAAGGTAGAGAAAAAGCATTCAACCAAGGTTATGATATACTCGGTACTCTTG 1398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1316 AAGAAAAGCAAGGTAGAGAAAAAGCATTCAACCAAGGTTATGATATACTCGGTACTCTTG 1375
Query 1399 TCCGTTCATCTTTATTGTTGGAGG-AT-AAAG-ATT----T-T-GTGAGTATGCATGATG 1449
|||||||||||||||||||||||| | |||| || | | |||||||||||||||
Sbjct 1376 TCCGTTCATCTTTATTGTTGGAGGGAGCAAAGGATAAAGATGTCGTGAGTATGCATGATA 1435
Query 1450 TGGTTCGTGAGATGGCTCTGTGGATATCATCTGATCTTGGAAAGCATAAAGAGCGATGTA 1509
||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||
Sbjct 1436 TGGTTCGTGAGATGGCTCTGTGGATATTTTCTGATCTTGGAAAGCATAAAGAGAGATGTA 1495
Query 1510 TTGTGCAAGCCGGTGTTGGATTAGATGAACTACCTGAAGTCAAGAATTGGAGAGCTGTGA 1569
||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||
Sbjct 1496 TTGTGCAAGCCGGCATTGGATTAGATGAACTACCTGAAGTCGAGAACTGGAGAGCTGTGA 1555
Query 1570 AAAGGATGTCGCTAATGAATAATAATTTTGAAAACATA-TATGGCTGTCCCGAATGCGTT 1628
|||||||||||||||||||||| ||||||||||| ||| | |||| ||||||||||||||
Sbjct 1556 AAAGGATGTCGCTAATGAATAACAATTTTGAAAAGATACT-TGGCAGTCCCGAATGCGTT 1614
Query 1629 GAACTTATAACTCTGTTCCTTCAGAATAACTACAAGTTGGTAGTCATCTCAATGGAATTC 1688
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1615 GAACTTATAACTCTGTTCCTTCAGAATAACTACAAGTTGGTAGACATCTCAATGGAATTC 1674
Query 1689 TTTCGGTGTATGCCTAGTCTAACTGTTTTGGATCTATCAGAAAATCACAGTCTTAGTGAA 1748
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1675 TTTCGGTGTATGCCTAGTCTAGCTGTTTTGGATCTATCAGAAAATCACAGTCTTAGTGAA 1734
Query 1749 CTGCCAGAAGAAATATCAGAGTTGGTGTCCTTGCAGTATCTTGATTTGTCCGGGACATAT 1808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1735 CTGCCAGAAGAAATATCAGAGTTGGTGTCCTTGCAGTATCTTGATTTGTCCGGGACATAT 1794
Query 1809 ATAGAGCGACTACCTCATGGTTTACAAAAGTTGAGAAAGTTAGTACATCTGAAACTGGAA 1868
|||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||
Sbjct 1795 ATAGAGCGACTACCTCATGGTTTACACGAGTTGAGAAAGCTAGTACATTTGAAACTGGAA 1854
Query 1869 AGGACGAGGAGACTTGAGAGCATTTCAGGGATATCATATTTGTCAAGTTTGAGAACATTA 1928
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1855 AGGACGAGGAGACTTGAGAGCATTTCAGGGATATCATATTTGTCAAGTTTGAGAACATTG 1914
Query 1929 AGACTAAGAGATTCAAAAACGACACTAGAGACGAGCCTAATGAAAGAACTACAGCTCTTA 1988
||||||||||||||||||||||||||||| ||| | || |||||||||||||||||||||
Sbjct 1915 AGACTAAGAGATTCAAAAACGACACTAGATACGGGGCTTATGAAAGAACTACAGCTCTTA 1974
Query 1989 GAACATTTAGAACTCATAACCACAAATATCTCCTCAAGTTTGGTTGGGGAATTGGTATAT 2048
|||||||||||||||||||||||| ||||||| ||| ||||||||||||||||| | | |
Sbjct 1975 GAACATTTAGAACTCATAACCACAGATATCTCGTCAGGTTTGGTTGGGGAATTGTTCTGT 2034
Query 2049 TATCCCAGAGTAGGGAGATGTATTCAACACATTTTTATTAGGGACCACTGGG-GCCGTCC 2107
||||||||||| |||||||||||||||||||||| |||||||||||| |||| || ||||
Sbjct 2035 TATCCCAGAGTTGGGAGATGTATTCAACACATTTATATTAGGGACCATTGGGAGC-GTCC 2093
Query 2108 AGAGGAATCAGTAGGAGTATTAGTTTTGCCAGCTATA-ACTAATCTCTGTTACATCTCCA 2166
|||||||| ||||||||||||||||||||||||||| | |||||| |||||||||||||
Sbjct 2094 GGAGGAATCCGTAGGAGTATTAGTTTTGCCAGCTATACA-TAATCTGTGTTACATCTCCA 2152
Query 2167 TATGGAACTGTTGGATGTGGGAGATAATGATAGAGAAGACACCATGGAACAAAAATCTAA 2226
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2153 TATGGAACTGTTGGATGTGGGAGATAATGATAGAGAAGACACCATGGAAAAAAAATCTAA 2212
Query 2227 CAAGTCCCAACTTCTCAAACCTCTCTAATGTGCGTATAGAAGGGTGTGATGGTTTAAAGG 2286
||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2213 CAAATCCCAACTTCTCAAACCTCTCTAATGTGCGAATAGAAGGGTGTGATGGTTTAAAGG 2272
Query 2287 ATTTGACGTGGCTGCTGTTTGCTCCAAACCTTATTAATCTTCGCGTTTGGGGGTGTAAGC 2346
||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct 2273 ATTTGACGTGGCTGCTGTTTGCTCCAAACCTGATCAATCTTCGCGTTTGGGGGTGTAAGC 2332
Query 2347 ATCTGGAGGATATAATAAGCAAAGAGAAAGCTGCGAGTGTTCTAGATAAGGAGATTCTTC 2406
|||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||
Sbjct 2333 ATCTGGAGGATATAATAAGCAAAGAGAAAGCTGCAAGTGTTTTAGAAAAGGAGATTCTTC 2392
Query 2407 CTTTCCAGAAACTAGAATGCCTGAACTTGTATCAGTTGTCTGAGCTGAAGAGCATCTACT 2466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2393 CTTTCCAGAAACTAGAATGCCTGAACTTGTATCAGTTGTCTGAGCTGAAGAGCATCTACT 2452
Query 2467 GGAATGCTCTGCCTTTTCAGCGTTTGAGATGTCTTGACATACTAAACAATTGTCCGAAGC 2526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2453 GGAATGCTCTGCCTTTTCAGCGTTTGAGATGTCTTGACATACTAAACAATTGTCCGAAGC 2512
Query 2527 TGAGAAAGCTTCCGCTGGATTCTAAAAGTGTTGTAAAAGTTGAAGAATTTGTCATAAAAT 2586
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2513 TGAGAAAGCTTCCGCTGGATTCTAAAAGTGTTGTCAAAGTTGAAGAATTTGTCATAAAAT 2572
Query 2587 ACAAGGAGAAAAAATGGATAGAAAGAGTTGAATGGGAGGACGAAGCGACACGACAGCGTT 2646
||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||
Sbjct 2573 ACAAGGAGAAAAAATGGATAGAAAGAGTTGAATGGGAGGACGAAGCGACACAATACCGTT 2632
Query 2647 TCTTACCTTCTTGTAGGCTGCGTTGA 2672
|||||||| |||||||||||||||||
Sbjct 2633 TCTTACCTACTTGTAGGCTGCGTTGA 2658
> AT1G12220.1 | Symbols: RPS5 | Disease resistance protein (CC-NBS-LRR
class) family | chr1:4144935-4147817 FORWARD LENGTH=2883
Length=2883
Score = 1391 bits (753), Expect = 0.0
Identities = 1653/2078 (80%), Gaps = 100/2078 (5%)
Strand=Plus/Plus
Query 10 ATTTTGCAGAGATGGGAGGTTGTATCTCTGTCTCGTTGTCATGTGATCGAGTAGTGAATC 69
||| ||||||||||||||||||| ||||||| || ||| ||||||||| |||||||| ||
Sbjct 66 ATTGTGCAGAGATGGGAGGTTGTTTCTCTGTTTCATTGCCATGTGATCAAGTAGTGAGTC 125
Query 70 AGATT-TCTCAG-TGTTTATGTGTCAGTGGTAA-TTATATTCATAACCTCTCTGAGAATC 126
|| || |||||| || ||||||||||| || || ||||||||| || ||||| ||||||
Sbjct 126 AG-TTCTCTCAGTTG-TTATGTGTCAG-GGGAAGTTATATTCACAATCTCTCCAAGAATC 182
Query 127 TGGCTTCTCTGCAGAAAGCCATGGGAGTGCTCAAGGCTAAGCGAGATGACGTGCA-AGGA 185
|||||||||||||||| |||||| || ||||||||||| || | |||| ||| | | ||
Sbjct 183 TGGCTTCTCTGCAGAAGGCCATGCGAATGCTCAAGGCTCGGCAATATGATGTG-ATAAGA 241
Query 186 AGGGTAGATAGAGAAGAGTTTACTGGGCATCGTCGAAGGCTTGCTCAAGTCCAGGTATGG 245
||| | || | |||||||||||| |||| || | ||||||| | ||||| |||||||||
Sbjct 242 AGGTTGGAAACAGAAGAGTTTACAGGGCGTCAACAAAGGCTTTCCCAAGTTCAGGTATGG 301
Query 246 CTTAC-ACGTATCCTAACCA-TCGAAAACCAATTCAATGATCTTCTTAGCACT--TGTAA 301
||||| | || |||||| || || ||||||| || |||||||| ||| | | | || ||
Sbjct 302 CTTACTA-GTGTCCTAATCATTC-AAAACCAGTTTAATGATCTGCTTCGTAGTAATG-AA 358
Query 302 CGCTGAGATTCAAAGGTTGTGTCTCTGTGGTTTTTGCTCTAAAAATATGAAAATGAGCTA 361
| |||| |||||||||||||||| |||||||| ||||| ||| || ||||| |||||||
Sbjct 359 -GTTGAGCTTCAAAGGTTGTGTCTTTGTGGTTTCTGCTCCAAAGATTTGAAATTGAGCTA 417
Query 362 TCTTTATGGGAAAAGAGTTATTGTGTTGTTGAGGGAGGTTGAGGGTCTCAGCTCTCAAGG 421
|| |||||||||||||||||| || |||||| ||| |||||| ||||||| ||||||||
Sbjct 418 TCGTTATGGGAAAAGAGTTATCATGATGTTGAAGGAAGTTGAGAGTCTCAGTTCTCAAGG 477
Query 422 AGAATTTGATGTGGTGACTGAGGCAACTCCGATAGCTGAGGTTGAAGAGTTGCCTATTCA 481
| ||||||||||| |||||||||||||| | ||||| || || ||| | ||| ||||
Sbjct 478 ATTCTTTGATGTGGTTTCTGAGGCAACTCCGTTTGCTGATGTGGATGAGATCCCTTTTCA 537
Query 482 ATCCACAATTGTTGGTCAGGA-TTCGATGCTCGACAAGGTATGGAACTGTCTAATGGAAG 540
| ||||||||||||||||||| | ||||| || |||| ||||||| |||| |||||||
Sbjct 538 ACCCACAATTGTTGGTCAGGAGAT-AATGCTTGAAAAGGCATGGAACCGTCTCATGGAAG 596
Query 541 ATAAAGT-CGGGATTGTGGGTCTGTATGGTATGGGTGGAGTAGGAAAAACCACCCTTCTC 599
|| | | ||||||| |||||||||| |||||||| |||||||| ||||| || || |||
Sbjct 597 ATGGA-TCCGGGATTTTGGGTCTGTACGGTATGGGGGGAGTAGGCAAAACGACACTACTC 655
Query 600 ACGCAGATCAACAATAAGTTTTCTAAACTAGGTGGTGGATTTGATGTCGTGATATGGGTT 659
||| ||||||||||||||||||||||| ||| || |||||||||| ||||||||||||
Sbjct 656 ACGAAGATCAACAATAAGTTTTCTAAAATAGATGACAGATTTGATGTTGTGATATGGGTT 715
Query 660 GTGGTGTCTAAAAATGCAACAGTACATAAGATTCAAAGAAG-CATCGGGGAAAAACTAGG 718
|| ||||||| || | ||||||| | |||||| ||||| || ||| | ||||| ||||
Sbjct 716 GTTGTGTCTAGAAGTTCAACAGTCCGTAAGATACAAAG-AGACATAGCAGAAAAGGTAGG 774
Query 719 CCTTGTTGGGAA-GAAGTGGGA-CGAGAAAAACAAAAACCAGAGAGCCCTTGACATCCAC 776
||||| ||||| | ||| ||| |||||||||| | ||||||| |||| |||||||||||
Sbjct 775 CCTTG-GGGGAATGGAGT-GGAGCGAGAAAAACGATAACCAGATAGCCGTTGACATCCAC 832
Query 777 AACGTTCTTAGGAGGAAG-AAGTTTGTCTTGTTGTTGGATGATATATGGGAAAAAGTGAA 835
|| || ||||||| || | |||||||| || ||||||||||| |||||||| ||||||||
Sbjct 833 AATGTCCTTAGGA-GACGAAAGTTTGTTTTATTGTTGGATGACATATGGGAGAAAGTGAA 891
Query 836 CTTAAATGTGATTGGAGTCCCGTATCCGAGTGGAGAAAACGGATGCAAAGTAGCATTCAC 895
||||| | | |||||||||||||||| || ||| ||||||||||| |||||||||||
Sbjct 892 TTTAAAAGCGGTTGGAGTCCCGTATCCAAGCAAAGATAACGGATGCAAGGTAGCATTCAC 951
Query 896 CACTCGTTCTAAG-GAAGTTTGTGGACGCATGGGGGTAGATGACCCGATGGAAGTCAGTT 954
||||||||| | || || ||||| ||||||||||| ||||| ||||||||||| || |
Sbjct 952 TACTCGTTCT-CGAGATGTGTGTGGGCGCATGGGGGTTGATGATCCGATGGAAGTTAGCT 1010
Query 955 GTTTAGACACCAGAA-ACGCCTGGGATTTGTTGAAAAAGAAAGTGGGGGAAAACACATTA 1013
|| || | ||| ||| | | ||||||||||| ||| ||| || ||| |||| ||| |
Sbjct 1011 GTCTACA-ACCCGAAGAATCTTGGGATTTGTTTCAAATGAAGGTTGGGAAAAATACACTG 1069
Query 1014 GGAAGCCACCCAGACATTCCCCAG-CTTGC-ACGCAAAGTTTCG-GA-AAAATGTCGTGG 1069
||||| |||||||||||| ||| | ||||| | | |||| ||| | |||||||||||
Sbjct 1070 GGAAGTCACCCAGACATT-CCCGGACTTGCTA-GAAAAG--TCGCTAGGAAATGTCGTGG 1125
Query 1070 TCTACCACTAGCACTGAATGTTCTTGGTG-AGACCATGTCATGCAAGAGGACAATACAAG 1128
|||||| ||||||| |||||| | |||| || | ||| ||||||| || ||| |||| |
Sbjct 1126 CCTACCATTAGCACTCAATGTTATCGGTGAAG-CTATGGCATGCAAAAGAACAGTACATG 1184
Query 1129 AATGGTGTCATGCAATTGAGGTTTTGACTTCATCTGCTACAGATTTTTCAGGAATGGAAG 1188
||||||||||||| ||||| ||||| || |||||||| | |||||||||||| |||||||
Sbjct 1185 AATGGTGTCATGCCATTGACGTTTTAACATCATCTGCCATAGATTTTTCAGGTATGGAAG 1244
Query 1189 ATGAGGTTCTTCCA-ATTTTAAAATATAGCTATGATAGCTTGAATGGGGAG--GATGCAA 1245
|||| ||| |||| |||| || ||||||||||||| || ||||||||| |||| ||
Sbjct 1245 ATGAAATTC-TCCATGTTTTGAAGTATAGCTATGATAATTTAAATGGGGAGCTGATG-AA 1302
Query 1246 AGTCGTGTTTCCTATATTGCTCTCTATTTCCTGAAGATTTTAAAATCAGA-AAAGAGATG 1304
| || || ||||| ||||||||||| ||||||||||| | | || || |||||| |
Sbjct 1303 A-TCCTGCTTCCTCTATTGCTCTCTGTTTCCTGAAGACTATCTTAT-TGATAAAGAGGGG 1360
Query 1305 TTTATTGAATACTGGATTTGTGAGGGATTCATAGAA-G-AAAAGCAAGGTAGAGAAAAAG 1362
|| | || |||||||| |||||||||||||| || | ||||| |||| |||| | | |
Sbjct 1361 TTGGTAGACTACTGGATAAGTGAGGGATTCATA-AATGAAAAAG-AAGGCAGAG-AGAGG 1417
Query 1363 CAT-TCAACCAAGGTTATGATATACTCGGTACTCTTGTCCGTTCATCTTTATTGTTGGAG 1421
|| | |||||||||||||| ||| | ||||| ||||||||| ||| ||| |||||||||
Sbjct 1418 AATATTAACCAAGGTTATGAGATAATTGGTACCCTTGTCCGTGCATGTTTGTTGTTGGAG 1477
Query 1422 G-ATAAA-G-----AT--TTTGTGAGTATGCATGATGTGGTTCGTGAGATGGCTCTGTGG 1472
| | ||| | || |||| ||||||||||||||||||||||||||||| |||
Sbjct 1478 GAAGAAAGGAACAAATCAAACGTGAAAATGCATGATGTGGTTCGTGAGATGGCTCTATGG 1537
Query 1473 ATATCATCTGATCTTGGAAAGCATAAAG-AGCGATGTATTGTGCAAGCCGGTGTTGGATT 1531
|||||||| |||||||| ||||| |||| || ||||||||||| ||| |||||||| ||
Sbjct 1538 ATATCATCCGATCTTGGGAAGCA-AAAGGAGAAATGTATTGTGCGAGCTGGTGTTGGGTT 1596
Query 1532 A-GATGAACTACCTGAAGTCAAGAATTGGAG-AGCTGTGA-AAAGGATGTCGCTAATGAA 1588
| | |||| |||| |||||||| |||||| | |||||| |||| || || | |||||
Sbjct 1597 ACG-TGAAGTACCAAAAGTCAAGGATTGGAACA-CTGTGAGAAAG-ATTTCTTTGATGAA 1653
Query 1589 TAATAATTTTGAAAACATATATGGCTGTCCCGAATGCGTTGAACTTATAACTCTGTTCCT 1648
|||| | ||||| | |||| || | ||| ||| || | || ||||| |||||| || ||
Sbjct 1654 TAATGAGATTGAAGAGATATTTGACAGTCACGAGTGTGCTGCACTTACAACTCTATTTCT 1713
Query 1649 TCAGAATAACTACAAGTTGGTAGTCATCTCAA-TGGAATTCTTTCGGTGTATGCCT-AGT 1706
|| || ||| || || |||| ||||| || |||||||||| ||||||||| | |
Sbjct 1714 CCAAAAGAACGAC--GT-GGTAAAGATCTCGGCTG-AATTCTTTCGATGTATGCCTCA-T 1768
Query 1707 CTAACTG-TTTTGGATCTATCAGAAAATCACAGTCTTAGTGAACTGCCAGAAGAAATATC 1765
|| || |||| ||||||||||| ||||| ||||||| |||| | ||||||||||||||
Sbjct 1769 CTGG-TGGTTTTAGATCTATCAGAGAATCAGAGTCTTAATGAATTACCAGAAGAAATATC 1827
Query 1766 AGAGTTGGTGTCCTTGCAG-TATCTTGAT-TTGTCCGGGACATATATAGAGCGACTACCT 1823
|||| ||| || ||| || ||| || | ||||| |||| |||| | | ||||||
Sbjct 1828 AGAGCTGGCCTCTTTG-AGATAT-TTCAACTTGTCATATACATGTATACATCAACTACC- 1884
Query 1824 CAT-GGTTTACAAA-AGTTGAGAAAGTTAGTACATCTGAAACTGGAA-AGGACGAGGAGA 1880
| | |||||| | | |||| |||| || |||||||||| || ||| | | ||| ||
Sbjct 1885 CGTTGGTTTATGGACA-TTGAAAAAGCTAATACATCTGAATCTCGAACAC-ATGAGCAGT 1942
Query 1881 CTTGAGAGCAT-TTCAGGGATATCATATTTGTC-AAGTTTGAGAACATTAAGACTAAGAG 1938
|||| ||| || || |||||||||| |||||| || |||||| ||||| ||||| |||
Sbjct 1943 CTTGGGAGTATATT-AGGGATATCAAATTTGTGGAA-TTTGAGGACATTGGGACTACGAG 2000
Query 1939 ATTCAAAAAC-GACACTAGAGACGAGCCTAATGAAAGAACTACAGCTCTTAGAACATTTA 1997
|||| | | | | ||||| | ||| || |||| || || ||||||||||||||| ||
Sbjct 2001 ATTCCAGA-CTGTTGCTAGATATGAGTTTAGTGAAGGAGCTGCAGCTCTTAGAACATCTA 2059
Query 1998 GAACTCATAACCACAA-ATATCTCCTCAAGTTTGGTTG 2034
||| | |||||| | | |||| || |||||||||||||
Sbjct 2060 GAAGTTATAACC-CTAGATATATCATCAAGTTTGGTTG 2096
> AT1G12280.1 | Symbols: | LRR and NB-ARC domains-containing disease
resistance protein | chr1:4174875-4177559 REVERSE LENGTH=2685
Length=2685
Score = 1312 bits (710), Expect = 0.0
Identities = 2107/2749 (77%), Gaps = 225/2749 (8%)
Strand=Plus/Plus
Query 21 ATGGGAGGTTGTATCTCTGTCTCGTTGTCATGTGATCG-AGTAGTGAATCAGATTTCTC- 78
||||||| |||| | | ||||||| || |||||| | ||| |||||||| || ||||
Sbjct 1 ATGGGAGCTTGTTTAACACTCTCGTTCTCTTGTGAT-GAAGTTGTGAATCAAATCTCTCA 59
Query 79 AGTGTTTATGTGTC-A-GTGGTAATTATATTCATAACCTCTCTGAGAATCTGGCT-TCTC 135
|| ||||||| || | |||| ||||||| | ||||| ||||| | | | ||
Sbjct 60 AG-GTTTATGCATCAACGTGG--GTTATATTTGCGAGCTCTCCAAGAATGTAG-TGGCTA 115
Query 136 TGCAGAAAGCCATGGGAGTGCTCAAGGCTAAGCGAGATGACGTGCAAGGAAGGGTAGATA 195
|| |||||| ||||| |||||| ||| ||||||||||| ||| || ||||||||||||
Sbjct 116 TGAAGAAAGACATGGAAGTGCTGAAGAAAAAGCGAGATGATGTGAAAAGAAGGGTAGATA 175
Query 196 GAGAAGAGTTTACTGGGCATCGTCG-AAGGCTTGCTCAAGTCC-AGGTATGGCTTACACG 253
||||||||| || ||| |||| | ||||||| ||||||||| ||| ||||||| |||
Sbjct 176 TAGAAGAGTTCACAAGGCGTCGT-GAAAGGCTTTCTCAAGTCCAAGG-ATGGCTT--ACG 231
Query 254 TAT-CCT-AACCATCGAAAACCAATTCAATGATCTTCTTAGCACTTGTAACGCTGAGATT 311
|| || ||| |||| || |||||||||| || |||| |||| | |||||||| ||
Sbjct 232 AATGTCTCGACCGTCGAGAATAAATTCAATGAACTGCTTACCACTAATGACGCTGAGCTT 291
Query 312 CAAAGGTTGTGTCTCTGTGGTTTTTGCTCTAAAAATATGAAAATGAGCTATCTTTATGGG 371
|||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||
Sbjct 292 CAAAGGTTGTGTCTCTTTGGATTTTGCTCTAAAAATGTGAAAATGAGCTATCTTTATGGG 351
Query 372 AAAAGAGTTATTGTGTTGTTGAGGGAGGTTGAGGGTCTCAGCTCTCAAGGAGAATTTGAT 431
||||| ||| | || |||||| |||| ||||| |||| || ||||||||||| ||||||
Sbjct 352 AAAAGGGTTGTCCTGATGTTGAAGGAGATTGAGAGTCTTAGTTCTCAAGGAGATTTTGAT 411
Query 432 G-TGGTGACTG-AGGCAACTCCGATAGCTGAGG-TTGAAGAGTTGCCTATTCAATCC-AC 487
|| ||||| || || |||| |||||| ||| |||||||| ||||||||||| || ||
Sbjct 412 ACTG-TGACTTTAGCCA-CTCCAATAGCT-AGGATTGAAGAGATGCCTATTCAA-CCTAC 467
Query 488 AATTGTTGGTCAGGATTCGATGCTCGACAAGG-TATGGAACTGTCTAATGGAAGATAAAG 546
||| || |||||||| | |||||||| |||| |||||| | |||| | ||||| ||
Sbjct 468 AATCGTAGGTCAGGAAACAATGCTCGA-AAGGGTATGGACCCGTCTCACAGAAGACGGAG 526
Query 547 TCGGGATTGTGGGTCTGTATGGTATGGGTGGAGTAGGAAAAACCACCCTTCTCACGCAGA 606
|| |||||||||||| ||||| |||||||||||||| ||||||||||||||||| | ||
Sbjct 527 ACGAGATTGTGGGTCTTTATGGCATGGGTGGAGTAGGCAAAACCACCCTTCTCACAC-GA 585
Query 607 -TCAACAATAAGTTTTCT-AAACTAGGTGGTGGATTTGATGTCGTGATATGGGTTGTGGT 664
||||||| ||||||||| ||| | || | || |||| || ||||||||||| |||||
Sbjct 586 ATCAACAACAAGTTTTCTGAAAA-ATGTAGCGGGTTTGGGGTTGTGATATGGGTGGTGGT 644
Query 665 GTCTAAAAATGCA-ACAGTACATAAGATTCAAAGA-AGCATCGGGGAAAA-ACTAGGCCT 721
|||||| | | || | | | |||| ||||||| || | ||||||| || | ||||| |||
Sbjct 645 GTCTAAGAGTCCAGATA-TCCATAGGATTCAAGGAGA-CATCGGG-AAGAGACTAGACCT 701
Query 722 TGTTGG-GAAGAAGTGGGACGA-GAAAAACAAAAACCAGAGAGCCCTTGACATCCACAAC 779
|| || ||||| |||||| | | ||| |||| |||||||||||||||||| ||||
Sbjct 702 TGGAGGCGAAGA-GTGGGATAATGTAAATGAAAA-CCAGAGAGCCCTTGACATATACAAT 759
Query 780 GTTCTTAGGAGG-AAGAAGTTTGTCTTGTTGTTGGATGATATATGGGAAAAAGTGAACTT 838
|| ||| ||| || || ||||| ||||||||||||||||||||||| |||||||| ||
Sbjct 760 GTCCTTGGGAAACAAAAA-TTTGTGTTGTTGTTGGATGATATATGGGAGAAAGTGAATTT 818
Query 839 A-AATGTGATTGGAGTCCCGTATCCGAGTGGAGAAAACGGATGCAAAGTAGCATTCACCA 897
| || ||| |||||||||| ||||| || || |||| ||||||||||||| ||||||||
Sbjct 819 AGAA-GTGCTTGGAGTCCCTTATCCAAGCAGACAAAATGGATGCAAAGTAGTATTCACCA 877
Query 898 CTCGTTCTA-AGGAAGTTTGTGGACGCATGGGGGTAGATGACCCGATGGAAGTCAGTTGT 956
||||||||| || | |||||||| || ||| |||| |||||||||||||||||||||||
Sbjct 878 CTCGTTCTAGAG-ATGTTTGTGGGCGTATGCGGGTTGATGACCCGATGGAAGTCAGTTGC 936
Query 957 TTAGACACC-A--GAAACGCCTGGGATTTGTTGAAAAAGAAAGTGGGGGAAAACACATTA 1013
|||| ||| | ||| |||||||| ||||| ||| |||||| || |||||||||||
Sbjct 937 CTAGA-ACCCAACGAA--GCCTGGGAATTGTTCCAAATGAAAGTTGGAGAAAACACATT- 992
Query 1014 GGAAG-CCACCCAGACATTCCCCAGCTTGCACGCAAAGTTTC-GGAAAAATGTCGTGGTC 1071
| ||| ||| ||||||||||| | |||||| | |||||| | |||||| ||| |||| |
Sbjct 993 GAAAGGCCATCCAGACATTCCTGAACTTGCAAGAAAAGTTGCTGGAAAA-TGTTGTGGCC 1051
Query 1072 TACCACTAGCACTGAATGTTC-TTGGTGAGACCATGTCATGCAAGAGGACAATACAAGAA 1130
||||| | ||||| ||||| | |||| ||||||||| ||||||| |||| ||||||||
Sbjct 1052 TACCATTGGCACTTAATGT-CATTGGCGAGACCATGGCATGCAAAAGGATGGTACAAGAA 1110
Query 1131 TGGTGTCATGCAATTGAGGTTTTGA-CTTCATCTGCTACAGATTTTTCAGGAATGGAAGA 1189
||| || | |||||||| ||||||| || ||| |||| |||| || | || |||||| |
Sbjct 1111 TGGCGTAACGCAATTGACGTTTTGAGCT-CATATGCTGCAGAATTCCCTGGTATGGAACA 1169
Query 1190 TGAGGTTCTTCCAATTTTAAAATATAGCTATGATAGCTTGAATG-GG-G-AGGATGCAAA 1246
| ||||||| ||| |||| ||||||||||||| || || || | ||| || |||
Sbjct 1170 A-A--TTCTTCCTATTCTAAAGTATAGCTATGATAATTTAAACAAGGAGCAGG-TG-AAA 1224
Query 1247 GTCGTGTTTCCTATATTGCTCTCTATTTCCTGAAGATTTTAAAATCAGAAAA-GAGATGT 1305
| |||||||||||||||||||| ||||||||||||| | || ||||| |||| ||
Sbjct 1225 C-CATGTTTCCTATATTGCTCTCTGTTTCCTGAAGATTATCGTATG-GAAAAAGAGAGGT 1282
Query 1306 TTATTGAATACTGGATTTGTGAGGGATTCATAGAAGAAAA-GCAAGGTAGAGAAAAAGCA 1364
| || || || ||||| ||||||||||||||||| ||||| | ||| |||||||| ||||
Sbjct 1283 TGATAGACTATTGGATATGTGAGGGATTCATAGATGAAAATGAAAG-TAGAGAAAGAGCA 1341
Query 1365 TTCAA-CCAAGGTTATGATAT-ACTCGGTACTC-TTGTCCGTTCATCTTTATTGTTGGAG 1421
|| || |||||||||||| || | | |||| || ||||||| ||| ||| |||||||||
Sbjct 1342 TT-AAGCCAAGGTTATGAGATCATT-GGTA-TCCTTGTCCGAGCATGTTTGTTGTTGGAG 1398
Query 1422 GA---TA--AA----GATTTTGTGAGTATGCATGATGTGGTTCGTGAGATGGCTCTGTGG 1472
|| || || || || | ||||||||||||||||| ||||||||||| |||
Sbjct 1399 GAAGCTATCAATAAAGAACAAGTTAAAATGCATGATGTGGTTCGGGAGATGGCTCTATGG 1458
Query 1473 ATAT-CATCTGATCTTGGA-AAGCATAAAGAGCGATGTATTGTGCAAGCCGGTGTTGGAT 1530
|| | ||||||||||||| || |||||||| ||||||||||||||| |||||||||||
Sbjct 1459 AT-TGCATCTGATCTTGGGGAA-CATAAAGAAAGATGTATTGTGCAAGTCGGTGTTGGAT 1516
Query 1531 TA-GATGAACTACCTGAA-GTCAAGAATTGGAGAGCTGTGAAAAGGATGTCGCTAATG-A 1587
|| | ||| |||| ||| |||||||| ||||| |||||| |||||||||||| ||| |
Sbjct 1517 TACG-TGAGGTACC-GAAAGTCAAGAACTGGAGTTCTGTGAGAAGGATGTCGCTGATGGA 1574
Query 1588 ATAATAATTTTGAAAACATATATGGCTGTCCCGAATGCGTTGAACTTATAACTCTGTTCC 1647
| ||| | |||||| ||| |||| ||||||||||| | ||||||| |||||||||||
Sbjct 1575 A-AATGAGATTGAAATTTTATCTGGCAGTCCCGAATGCCTGGAACTTACAACTCTGTTCC 1633
Query 1648 TTCAGAATAACT-A--CAAGTTGGTAG-TCATCTCA-ATGGAATTCTTTCGGTGTATGCC 1702
||||||| || | | || ||| || | ||||| ||| ||||||| |||||||| ||
Sbjct 1634 TTCAGAAAAA-TGATTCA--TTGCTACAT-ATCTCGGATG-AATTCTTCCGGTGTATCCC 1688
Query 1703 TA-GTCTAACTGTTTTGGATCTATCAGAAAAT-CACAGTCTTAGTGAACT-GCCAGAAG- 1758
| | ||| ||||||||||||||||| ||| || ||||| | ||| | ||| ||
Sbjct 1689 AATG-CTAGTTGTTTTGGATCTATCAGGGAATTCA-AGTCTCCG-GAAATTGCCT-AACC 1744
Query 1759 AAATATCAGAGTTGGTGTCCTTGCAGT-ATCTTGATTTGTCCG-GGACATATAT-AGAGC 1815
|||||||| |||| || ||||||| || ||||||| ||||| | ||||||| || | |||
Sbjct 1745 AAATATCAAAGTTAGTCTCCTTGC-GTTATCTTGACTTGTC-GTGGACATACATTA-AGC 1801
Query 1816 GACTACCTCAT-GGTTTACAAAAGTTGAGAAAGTT-AGTACATCTGAAACTGGAA-AGGA 1872
| |||||| | ||| ||||| |||||| |||| | || | || ||| | |||| | |
Sbjct 1802 GGCTACCTG-TCGGTCTACAAGAGTTGAAAAAGCTCAG-ATATTTGAGATTGGATTAC-A 1858
Query 1873 CGAGGAGACTTGAGAGCATTTCAGGGATATCATATTTGTCAAGTTTGAG-AACATTA-AG 1930
|| ||||||| |||| ||||||||||||||| || | ||||||||||| || ||| |
Sbjct 1859 TGAAGAGACTTAAGAGTATTTCAGGGATATCAAATATATCAAGTTTGAGGAA-ATTGCA- 1916
Query 1931 ACTAAGAGATTCAAAAACGACACTAGAGACGAGCCTAATGAAAGAACTACAGCTCTTAGA 1990
||| | | || |||| | | ||||| | |||| || || | || | ||||| |||||
Sbjct 1917 ACTTTTACAGTCTAAAATGTCGCTAGACATGAGCTTAGTGGAGGAGTTGCAGCTATTAGA 1976
Query 1991 ACATTTAGAACT-CATAACCACAAATATCTCCTCAAGTTTGGTTG-GG-GAA-TTGGTAT 2046
|||||||||| | | ||| || || |||| ||||| ||||| | || ||| ||| ||
Sbjct 1977 ACATTTAGAAGTTC-TAAACATAAGTATCAAGTCAAGCTTGGTAGTGGAGAAGTTGTTAA 2035
Query 2047 ATTATCCCAGAGTAGG-GAGATGTATTCAACA-CATTTTTA-TTAGGGACCACTGGGGCC 2103
|| |||||| || || || |||| ||||| | | || || |||| | || |
Sbjct 2036 ATGCTCCCAG-GTTGGTGAAATGTCTTCAA-ATC-TTAGTACTTAG--A-----GGAGT- 2084
Query 2104 GTCCAG-AGGAATCAGTA-GGAGTATT-AGTTTTGCCAGCTATA-ACTAATCTCTGTTAC 2159
|| || | |||||| | |||||||| | ||| ||||| ||| | ||||||| | |
Sbjct 2085 -TC-AGGAAGAATCA-TCCGGAGTATTGACTTT-GCCAGATATGGA-TAATCTCAATAA- 2138
Query 2160 A-TC-TCCATATGGAACTGTTGGA-TGTGGGAGATAATGATAGAGAAGACACCATGGAAC 2216
| || || ||| |||| ||| ||| |||| ||||||| |||||||| || | | | | |
Sbjct 2139 AGTCATC-ATAAGGAAGTGT-GGAATGTGTGAGATAAAGATAGAGAGGAAAACTTT-ATC 2195
Query 2217 AAAA--ATCTAACA-A-GTCCCAA--CT---T-C-TC-A-AACCTCTCTAATGTGCGTAT 2263
| | ||| |||| | ||||||| || | | || | |||||||| | ||||| |||
Sbjct 2196 ATTATCATCGAACAGAAGTCCCAAAACTCAATTCCTCCATAACCTCTCCACTGTGCATAT 2255
Query 2264 A-GAAGGGTGTGATGGTTTAAAGGATTTGACGTGGCTGCTGTTTGCTCCAAACCTTATTA 2322
| | || ||||||||| | ||||||||||||||| || |||| ||||| ||||| | ||
Sbjct 2256 AAGTAGC-TGTGATGGTCTGAAGGATTTGACGTGGTTGTTGTTCGCTCCTAACCTCACTA 2314
Query 2323 ATCTTCGCG-TT-TGGGGGT-GTAAGC-ATCTGGA-GGATATAATAAGCAAAGAGAAAGC 2377
||| || | || ||| | | || | | | || ||| ||||||| | ||||||||||
Sbjct 2315 GTCT-CGAGGTTCTGGAC-TCGGAA-CTAG-TAGAAGGA-ATAATAAACCAAGAGAAAGC 2369
Query 2378 TGCGAGTGTTCTAGATAAGGAGATTC-TTCCTTTCCAGAAACTAGA-ATGCCTGAA-CTT 2434
| || | | || | || || | ||||||||||||||||||| | | || | | |
Sbjct 2370 TATGACTATG--AG-T--GGT-AT-CATTCCTTTCCAGAAACTAGAGA-GTCT-ACGCCT 2420
Query 2435 GTATCAGT-T-GTCTGA-GCTGAAGAGCATCTACTGG-AATGCTCTGCCTTTTC-AGCGT 2489
| || | | | | || | ||| ||||||||||||| || ||||| |||||| | ||
Sbjct 2421 ACA-CAATCTAG-C-GATGTTGAGGAGCATCTACTGGCAAC-CTCTGTCTTTTCCAT-GT 2475
Query 2490 TTGA-GATGTCTTGACATACTAAACAATTGTCC-GAAGCTGAGAAAGCTTCCGCTGGATT 2547
||| || || ||||| | || ||||| || ||||||||||||||| ||||||
Sbjct 2476 CTGAAGACAA-TTCACATA--ACG-AAGTGTCCTGA-GCTGAGAAAGCTTCCATTGGATT 2530
Query 2548 CTAAAAGTGTTGTAAAAGTTGAAGAATTTGTCATAAAATAC-AAGGAGAAAAAATGGATA 2606
|| ||| || ||| | ||||||| ||||||| || ||| ||| || || ||||| |
Sbjct 2531 CTGAAATTGCCATAAGGGATGAAGAACTTGTCATTAAGTACCAAG-AGGAAGAATGGCTT 2589
Query 2607 GAAAGAGTTGAATGGGAGGACGAAGCGACACGACAGCGTTTCTTACCTT 2655
||||| ||||||||||| ||||||| ||| ||| |||||||||||||
Sbjct 2590 GAAAGGGTTGAATGGGACAACGAAGCCACAAGACTCCGTTTCTTACCTT 2638
> AT4G14610.1 | Symbols: | pseudogene, disease resistance protein
(CC-NBS-LRR class), putative, domain signature CC-NBS-LRR
exists, suggestive of a disease resistance protein.; blastp
match of 45% identity and 2.2e-162 P-value to GP|24461866|gb|AAN62353.1|AF506028_20|AF506028
NBS-LRR type disease resistance
protein {Poncirus trifoliata} | chr4:8380848-8383496
REVERSE LENGTH=2649
Length=2649
Score = 1131 bits (612), Expect = 0.0
Identities = 1646/2129 (77%), Gaps = 136/2129 (6%)
Strand=Plus/Plus
Query 21 ATGGGAGGTTGTATCTCTGTCTCGTTGTCATGTGATCGAG-TAGTGAATCAGATT-TCTC 78
||||||||||||||||| |||||| |||||||||||| || | ||||||||| || ||||
Sbjct 1 ATGGGAGGTTGTATCTCGGTCTCGGTGTCATGTGATC-AGTTTGTGAATCAG-TTCTCTC 58
Query 79 AGTGTTTATGTGTCAGTGGTAA--TTATATTCATAACC-TCTCTGAGAATCTGGCTTCTC 135
| || ||||| || | | || ||| ||||||| || || | |||||||| || |||
Sbjct 59 AATGGTTATGCGTTA--GAAAAGGTTACATTCATAGCCTTC-CCGAGAATCTAGCAGCTC 115
Query 136 TGCAGAAAGCCATGGGAGTGCTCAAGGCTAAGCGA-GATGACGTGCAAGGAAGGGTAGAT 194
| || |||||||| | ||| |||||| | |||| | ||||| ||| || ||||||| |||
Sbjct 116 TACAAAAAGCCATTGAAGTTCTCAAGACAAAGC-ACGATGATGTGAAAAGAAGGGTCGAT 174
Query 195 AGAGAAGAGTTTACT-GGGCATCGTCGA-AGGCTTGCTCAAGTCCAGGTATGGCTTACAC 252
| |||||| ||| || |||| ||||| | |||||| ||||||| |||||||||||||||
Sbjct 175 AAAGAAGAATTT-CTAGGGCGTCGTC-ATAGGCTTTCTCAAGTTCAGGTATGGCTTACAA 232
Query 253 GTATCCTAACCATCGA-AAACCA-ATTCAATGATCTT-CTTAGCACTTGTA-ACGCTGAG 308
| || | | ||||| ||| | ||||||||| || |||| | | | | | ||||
Sbjct 233 ATGTCGTGATTATCGAGAAA--AGGTTCAATGAT-TTGTTTAGTA-ATAAAGAGGTTGAG 288
Query 309 ATTCAAAGGTTGTGTCTCTGTGGTTTTTGCTCTAAAA-ATATGAAAATGAGCTATCTTTA 367
|| | ||||||||| | ||||| |||||||| |||| | || ||| |||||||| |||
Sbjct 289 ATAGAGAGGTTGTGTTTTTGTGGGTTTTGCTCCAAAAGTTTTGGAAA-GAGCTATCATTA 347
Query 368 TGGGAAAA-GAGTTATTGTGTTGTTGAGGGAGGTTGAGGGTCTCAGC-TCTCAAGGAGAA 425
|||||||| | |||| ||| |||||| ||| |||||| |||| | |||| |||| |
Sbjct 348 TGGGAAAATG-GTTAGCGTGATGTTGAAGGAAGTTGAGAATCTC-TCTTCTCGTGGAGTA 405
Query 426 TTTGATGTGGTGACTGAGGCAACTCCGATAGCTGAGGTTGAAGAGTTGCCTATTCAATCC 485
||||||||||||||||||| || || | ||||| | ||||| ||| ||||||||||||||
Sbjct 406 TTTGATGTGGTGACTGAGGAAAATCTGGTAGCTCAAGTTGAGGAGATGCCTATTCAATCC 465
Query 486 ACAATTGTTGGTCAGGATTCGATGCTCGACAA-GGTATGGAACTGTCTAATGGAAGATAA 544
||| |||||||||| || | ||||| || || ||| |||||| ||| ||| |||||
Sbjct 466 ACAGTTGTTGGTCAAGAGACAATGCTTGA-AAGGGTTTGGAACACTCTCATGAAAGATGG 524
Query 545 AGTCGGGATTGTGGGTCTGTATGGTATGGGTGGAGTAGGAAAAACCACCCTTCTCACGCA 604
| || ||| ||||| | ||||| ||||||||||| ||||||||||| ||||| |||||
Sbjct 525 ATTCAAGATCATGGGTTTATATGGAATGGGTGGAGTGGGAAAAACCACGCTTCTTACGCA 584
Query 605 GATCAACAATAAGTTTTCT-AAACTAGGTGGTGGATTTGATGTCGTGATATGGGTTGTGG 663
|||||||| ||||||||| |||| || ||||||||||||| | ||||| |||||||| |
Sbjct 585 AATCAACAAGAAGTTTTCTGAAAC-AGATGGTGGATTTGATATTGTGATGTGGGTTGTTG 643
Query 664 TGTCTAAAA-ATGCAACAGTA-C-ATAAGATTCAAAGAAG-CATCGGGGAAAA-ACTAGG 718
||||||||| | | | || | | ||| ||||| |||||| ||| | |||| ||||||
Sbjct 644 TGTCTAAAACCT-C-AGAG-ATCTATAGGATTC-AAGAAGACAT-TGCAAAAAGACTAGG 698
Query 719 CCTTGTTGGG-AAGAAGTGGGACGAGAAAAACAAAAACCAGAGAGCCCTTGACATCCACA 777
||| ||| || |||||||| | |||||| ||||| |||||||| ||||||| ||||
Sbjct 699 TCTT-ACGGGCGAGGAGTGGGACAAAAAAAACGAAAACAAGAGAGCCGTTGACATACACA 757
Query 778 ACGTTCTTAGGAGGA-AGAAGTTTGTCTTGTTGTTGGATGATATATGGGAAAAAGTGAAC 836
| || ||||||| || | || ||||| || |||||||||||||||||||| |||||||||
Sbjct 758 ATGTCCTTAGGA-GACATAAATTTGTGTTATTGTTGGATGATATATGGGAGAAAGTGAAC 816
Query 837 TTA-AATGTGATTGGAGTCCCGTATCCGAGTGGAGAAAACGGATGCAAAGTAGCATTCAC 895
||| ||| || ||||||| |||||||| ||| ||||||| ||| ||| ||||||||| ||
Sbjct 817 TTAGAAT-TGGTTGGAGTACCGTATCCAAGTAGAGAAAATGGAAGCATAGTAGCATTTAC 875
Query 896 CACTCGTTCTAAG-GAAGTTTGTGGACGCATGGGGGTAGATGACCCGATGGAAGTCAGTT 954
||| |||||| | || |||||||| || ||||| || |||||||||||| |||| ||||
Sbjct 876 CACCCGTTCT-CGAGATGTTTGTGGGCGTATGGGAGTCGATGACCCGATGCAAGTTAGTT 934
Query 955 GTTTAGACACCAGAA-ACGCCTGGGATTTGTTGAAAAAGAAAGTGGGGGAAAACACATTA 1013
|||| || ||| ||| | || ||||||||||| |||| ||||| || |||||||| ||
Sbjct 935 GTTTGGA-ACCTGAAGATGCTTGGGATTTGTTTCAAAACAAAGTAGGAGAAAACAC-TTT 992
Query 1014 G-GAAGCCACCCAGACATTCCCCAGCTTGC-ACGCAAAGTTTCGGAAAAATGTCGTGGTC 1071
| |||||| || || ||||| | ||||| | | |||| | ||||||||||||||||
Sbjct 993 GAAAAGCCATCCGGATATTCCTGAACTTGCAAAAC-AAGTCGCTGAAAAATGTCGTGGTC 1051
Query 1072 TACCACTAGCACTGAATGTTC-TTGGTGAGACCATGTCATGCAAGAGGACAATACAAGAA 1130
||||| ||||||| |||| || |||| || || ||| ||||||| || ||| | ||||||
Sbjct 1052 TACCATTAGCACTTAATG-TCATTGGAGAAACTATGGCATGCAAAAGCACAGTTCAAGAA 1110
Query 1131 TGGTGTCATGCAATTGAGGTTTTGACTTCATCTGCTACAGATTTTTCAGGAATGGAAGAT 1190
||| |||| || ||||| |||||||||||||| || | ||| |||||||| ||||||||
Sbjct 1111 TGGCGTCACGCGATTGATGTTTTGACTTCATCAGCCATAGAGTTTTCAGGCATGGAAGAC 1170
Query 1191 GAGGTTCTTCCA-ATTTTAAAATATAGCTATGATAGCTTGA-ATGGGGAGGAT-GCAAAG 1247
|| ||||| || || || || ||||||||||||| || | | ||||| || ||||
Sbjct 1171 GAAATTCTT-CAGATATTGAAGTATAGCTATGATA-ATTTACAAAGGGAGCATATCAAA- 1227
Query 1248 TCGTGTTTCCTATATTGCTCTCTATTTCCTGAAGATT-TTAAAATCAGAAAAGA-GATGT 1305
|| |||||||||||||||||| ||||||||||||||| | | | | || ||||| || |
Sbjct 1228 TCATGTTTCCTATATTGCTCTTTATTTCCTGAAGATTATGAGATTAAG-AAAGAGGA-G- 1284
Query 1306 TTA-TTGAATACTGGATTTGTGAGGGATTCATAGAAG-AAAAGCAAGGTAGAGAAAAAGC 1363
||| | || || ||||| ||||| ||||||||||| | ||||| | |||| ||| | |||
Sbjct 1285 TTAGTAGACTATTGGATATGTGAAGGATTCATAGATGCAAAAG-ATGGTAAAGAGAGAGC 1343
Query 1364 -ATTCAACCAAGGTTATGATATAC-TCGGTACTCTTGTCCGTTCAT-CTTTATTGTTGGA 1420
| | ||| |||| ||||| || | ||||||||||||||||| ||| ||||||| ||||
Sbjct 1344 GA-TAAACGAAGGCTATGAGAT-CATCGGTACTCTTGTCCGTACATGTTTTATTGATGGA 1401
Query 1421 -G--G-AT---A-AAGA-TTTTGTGAGTATGCATGATGTGGTTCGTGAGATGGCTCTGTG 1471
| | || | || | |||| |||||||| |||||||||||||||||||| ||
Sbjct 1402 GGAAGAATGGAAGAAAACGGAAGTGAAAATGCATGACGTGGTTCGTGAGATGGCTCTATG 1461
Query 1472 GATATCATCTGATCTTGGAAAGCATAAAGAGCGATGTATTGTGCAAGCCGGTGTTGGATT 1531
|||||||||||||||||||||||||||||| | ||| ||||||| |||||||||||| ||
Sbjct 1462 GATATCATCTGATCTTGGAAAGCATAAAGATCAATGCATTGTGCGAGCCGGTGTTGGGTT 1521
Query 1532 AGATGAACTACCTGAAGTCAAGAATTGGAGAGCTGTGAAAAGGATGTCGCTAATGAATAA 1591
| ||| | |||| ||||| ||||| ||||||||||||| ||| |||||| | ||||| ||
Sbjct 1522 ACATGCAGTACCGGAAGTGAAGAACTGGAGAGCTGTGAGAAGAATGTCGTTGATGAAAAA 1581
Query 1592 TAATTTTGAAAACATATATGGCT-GTCCCGA-ATG-CGTTGAACTTATAACTCTGTTCCT 1648
| | ||||||| || | ||| | | ||| | ||| | | |||||| |||||| ||||
Sbjct 1582 TGAGCTTGAAAAGATTT-TGGGTTG-CCCTACATGTCCTC-AACTTACAACTCTCCTCCT 1638
Query 1649 TCAGAATAACTACAAGTTGGTAG-TCATCTCAATG-GAATTCTTTCGGTGT-ATGCCTAG 1705
|| || ||| |||| |||||| | || || | ||||||||||| | | |||||||
Sbjct 1639 CCAAAAAAACCACAAATTGGTAAAT-ATTTCCG-GAGAATTCTTTCGAT-TCATGCCTAA 1695
Query 1706 TCTAA-CTGTTTTGGATCTATCA-GAAAATCAC-AGTCTTAGTGAACTGCCAGAAGAAA- 1761
|| | || |||||| ||||| | || | | ||||| | || | | ||| ||||||
Sbjct 1696 CCTTGTC-GTATTGGATTTATCATGGAA-T-AGTAGTCTCACTGGATTACCA-AAGAAAA 1751
Query 1762 TATCAGAGTTGGTGTCCTTGC-AGTATCTTGATTTGTCCGGG-ACATATATAGAGCGACT 1819
|||||||||| || ||||||| | |||||||| ||||| | ||| | || || | |
Sbjct 1752 TATCAGAGTTAGTCTCCTTGCGA-TATCTTGACTTGTC-GTATACAAACATCGAAAGGTT 1809
Query 1820 ACCTCATGGTTTACAAAAGTTGAGA-AAGTTAGTACATCTGAAACTGGAAAGGACGAGGA 1878
||| |||||||||| |||||| | || | | |||||||||| |||| | || ||
Sbjct 1810 GCCTGTTGGTTTACAAGAGTTGAAACAACTAA-TACATCTGAATTTGGAGTCCATGAAGA 1868
Query 1879 GACTTG-AGAGCATTTCAGGGATATCATAT-TTGTCAAGTTTGA-GAACATTAAGACTA- 1934
| ||| |||| || | ||| |||| || |||| ||||||| || || | ||||||
Sbjct 1869 GT-TTGGAGAGTATG-CTGGGGTATC-TAAGTTGTTGAGTTTGAAGA-CACTGAGACTAC 1924
Query 1935 AGAGATTC-AAAAACGACACTAGA-GACGAGCCTAAT-GAAAGAACTACAGCTCTTAGAA 1991
| | | || ||||| | | ||||| | || | | | ||| || ||||| |||||||||
Sbjct 1925 AAA-AGTCCAAAAAGG-CTCTAGATGT-GAAC-TCAGCGAAGGAGCTACAACTCTTAGAA 1980
Query 1992 CATTTAGAACT-CATAACCACAAATATCTCCTCAAGTTTGGTTGGGGAA--TTGGTATAT 2048
||| ||||| | | |||||| | |||||| |||||||||||| |||| || || |||
Sbjct 1981 CATATAGAAGTTC-TAACCATAGATATCTTTTCAAGTTTGGTTTTGGAACATTTGT-TAT 2038
Query 2049 TATCCCAGAG-TAGG-GAGATGTATTCAA 2075
|| ||||| | || || || |||||||
Sbjct 2039 GCTCTCAGAGATTGGCGAAATCTATTCAA 2067
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 133694903095
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5