BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg920055 Length=2692 Score E Sequences producing significant alignments: (Bits) Value AT1G12210.1 | Symbols: RFL1 | RPS5-like 1 | chr1:4140948-414360... 4145 0.0 AT1G12220.1 | Symbols: RPS5 | Disease resistance protein (CC-NB... 1391 0.0 AT1G12280.1 | Symbols: | LRR and NB-ARC domains-containing dis... 1312 0.0 AT4G14610.1 | Symbols: | pseudogene, disease resistance protei... 1131 0.0 > AT1G12210.1 | Symbols: RFL1 | RPS5-like 1 | chr1:4140948-4143605 FORWARD LENGTH=2658 Length=2658 Score = 4145 bits (2244), Expect = 0.0 Identities = 2529/2666 (95%), Gaps = 22/2666 (1%) Strand=Plus/Plus Query 21 ATGGGAGGTTGTATCTCTGTCTCGTTGTCATGTGATCGAGTAGTGAATCAGATTTCTCAG 80 ||||| |||||| |||| |||||||||||||||||||||| |||||||||| |||| ||| Sbjct 1 ATGGGCGGTTGTGTCTCGGTCTCGTTGTCATGTGATCGAGAAGTGAATCAGTTTTCACAG 60 Query 81 TGTTTATGTGTCAGTGGTAATTATATTCATAACCTCTCTGAGAATCTGGCTTCTCTGCAG 140 || |||||||||||||| | |||||| || ||||| ||||||||||||||||| |||||| Sbjct 61 TGGTTATGTGTCAGTGGGAGTTATATCCAAAACCTATCTGAGAATCTGGCTTCCCTGCAG 120 Query 141 AAAGCCATGGGAGTGCTCAAGGCTAAGCGAGATGACGTGCAAGGAAGGGTAGATAGAGAA 200 |||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||| Sbjct 121 AAAGCCATGGGAGTGCTCAACGCTAAGCGAGATGACGTGCAAGGAAGGATAAATAGAGAA 180 Query 201 GAGTTTACTGGGCATCGTCGAAGGCTTGCTCAAGTCCAGGTATGGCTTACACGTATCCTA 260 |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| | Sbjct 181 GAGTTTACTGGGCATCGTAGAAGGCTTGCTCAAGTTCAGGTATGGCTTACACGTATCCAA 240 Query 261 ACCATCGAAAACCAATTCAATGATCTT-CTTAGCACTTGTAACGCTGAGATTCAAAGGTT 319 |||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| Sbjct 241 ACCATCGAAAACCAATTCAATGAT-TTGCTTAGCACTTGTAACGCTGAGATACAAAGGTT 299 Query 320 GTGTCTCTGTGGTTTTTGCTCTAAAAATATGAAAATGAGCTATCTTTATGGGAAAAGAGT 379 |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| || Sbjct 300 GTGTCTCTGTGGATTTTGCTCTAAAAATGTGAAAATGAGCTATCTTTATGGGAAAAGGGT 359 Query 380 TATTGTGTTGTTGAGGGAGGTTGAGGGTCTCAGCTCTCAAGGAGAATTTGATGTGGTGAC 439 |||||| || |||||||||||||||||||| || |||||||||| ||||||| | ||||| Sbjct 360 TATTGTCTTATTGAGGGAGGTTGAGGGTCTTAGTTCTCAAGGAGTATTTGATATAGTGAC 419 Query 440 TGAGGCAACTCCGATAGCTGAGGTTGAAGAGTTGCCTATTCAATCCACAATTGTTGGTCA 499 ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 420 TGAGGCAGCTCCTATAGCTGAGGTTGAAGAGTTGCCTATTCAATCCACAATTGTTGGTCA 479 Query 500 GGATTCGATGCTCGACAAGGTATGGAACTGTCTAATGGAAGATAAAGTCGGGATTGTGGG 559 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 480 GGATTCGATGCTCGACAAGGTATGGAACTGTCTAATGGAAGATAAAGTTTGGATTGTGGG 539 Query 560 TCTGTATGGTATGGGTGGAGTAGGAAAAACCACCCTTCTCACGCAGATCAACAATAAGTT 619 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 540 TCTGTATGGTATGGGTGGAGTAGGCAAAACCACCCTTCTCACGCAGATCAACAATAAGTT 599 Query 620 TTCTAAACTAGGTGGTGGATTTGATGTCGTGATATGGGTTGTGGTGTCTAAAAATGCAAC 679 ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct 600 TTCTAAACTAGGTGGTGGATTTGATGTCGTGATATGGGTCGTGGTGTCTAAAAACGCAAC 659 Query 680 AGTACATAAGATTCAAAGAAGCATCGGGGAAAAACTAGGCCTTGTTGGGAAGAAGTGGGA 739 ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| Sbjct 660 AGTACATAAGATTCAAAAAAGCATCGGGGAAAAACTAGGCCTTGTTGGGAAGAATTGGGA 719 Query 740 CGAGAAAAACAAAAACCAGAGAGCCCTTGACATCCACAACGTTCTTAGGAGGAAGAAGTT 799 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 720 CGAGAAAAACAAAAACCAGAGAGCCCTTGACATCCACAACGTTCTTAGGAGGAAGAAATT 779 Query 800 TGTCTTGTTGTTGGATGATATATGGGAAAAAGTGAACTTAAATGTGATTGGAGTCCCGTA 859 ||| ||||||||||||||||||||||| |||||| | ||||| ||||||||||||||||| Sbjct 780 TGTGTTGTTGTTGGATGATATATGGGAGAAAGTGGAGTTAAAGGTGATTGGAGTCCCGTA 839 Query 860 TCCGAGTGGAGAAAACGGATGCAAAGTAGCATTCACCACTCGTTCTAAGGAAGTTTGTGG 919 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 840 TCCGAGTGGAGAAAACGGATGCAAAGTAGCATTCACCACTCATTCTAAGGAAGTTTGTGG 899 Query 920 ACGCATGGGGGTAGATGACCCGATGGAAGTCAGTTGTTTAGACACCAGAAACGCCTGGGA 979 |||||||||||||||| ||||||||||| |||||||| | ||||| ||||||| ||||| Sbjct 900 ACGCATGGGGGTAGATAACCCGATGGAAATCAGTTGTCTGGACACTGGAAACGCTTGGGA 959 Query 980 TTTGTTGAAAAAGAAAGTGGGGGAAAACACATTAGGAAGCCACCCAGACATTCCCCAGCT 1039 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 960 TTTGTTGAAAAAGAAAGTGGGGGAAAACACATTAGGAAGCCACCCAGACATTCCCCAGCT 1019 Query 1040 TGCACGCAAAGTTTCGGAAAAATGTCGTGGTCTACCACTAGCACTGAATGTTC-TTGGTG 1098 |||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||| Sbjct 1020 AGCACGCAAAGTTTCGGAAAAATGTTGTGGTCTACCACTAGCACTGAATGT-CATTGGTG 1078 Query 1099 AGACCATGTCATGCAAGAGGACAATACAAGAATGGTGTCATGCAATTGAGGTTTTGACTT 1158 |||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct 1079 AGACCATGTCATTCAAGAGGACAATACAAGAATGGCGTCATGCAACTGAGGTTTTGACTT 1138 Query 1159 CATCTGCTACAGATTTTTCAGGAATGGAAGATGAGGTTCTTCCAATTTTAAAATATAGCT 1218 | | |||||||||||||| || ||||||||||| |||||||||||||||||||||||| Sbjct 1139 C-T--GCTACAGATTTTTCTGGCATGGAAGATGAAATTCTTCCAATTTTAAAATATAGCT 1195 Query 1219 ATGATAGCTTGAATGGGGAGGATGCAAAGTCGTGTTTCCTATATTGCTCTCTATTTCCTG 1278 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1196 ATGATAGCTTGAATGGGGAGGATGCGAAGTCGTGTTTCCTATATTGCTCTCTATTTCCTG 1255 Query 1279 AAGATTTTAAAATCAGAAAAGAGATGTTTATTGAATACTGGATTTGTGAGGGATTCATAG 1338 |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1256 AAGATTTTGAAATCAGAAAAGAGATGCTTATTGAATACTGGATTTGTGAGGGATTCATAA 1315 Query 1339 AAGAAAAGCAAGGTAGAGAAAAAGCATTCAACCAAGGTTATGATATACTCGGTACTCTTG 1398 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1316 AAGAAAAGCAAGGTAGAGAAAAAGCATTCAACCAAGGTTATGATATACTCGGTACTCTTG 1375 Query 1399 TCCGTTCATCTTTATTGTTGGAGG-AT-AAAG-ATT----T-T-GTGAGTATGCATGATG 1449 |||||||||||||||||||||||| | |||| || | | ||||||||||||||| Sbjct 1376 TCCGTTCATCTTTATTGTTGGAGGGAGCAAAGGATAAAGATGTCGTGAGTATGCATGATA 1435 Query 1450 TGGTTCGTGAGATGGCTCTGTGGATATCATCTGATCTTGGAAAGCATAAAGAGCGATGTA 1509 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct 1436 TGGTTCGTGAGATGGCTCTGTGGATATTTTCTGATCTTGGAAAGCATAAAGAGAGATGTA 1495 Query 1510 TTGTGCAAGCCGGTGTTGGATTAGATGAACTACCTGAAGTCAAGAATTGGAGAGCTGTGA 1569 ||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||| Sbjct 1496 TTGTGCAAGCCGGCATTGGATTAGATGAACTACCTGAAGTCGAGAACTGGAGAGCTGTGA 1555 Query 1570 AAAGGATGTCGCTAATGAATAATAATTTTGAAAACATA-TATGGCTGTCCCGAATGCGTT 1628 |||||||||||||||||||||| ||||||||||| ||| | |||| |||||||||||||| Sbjct 1556 AAAGGATGTCGCTAATGAATAACAATTTTGAAAAGATACT-TGGCAGTCCCGAATGCGTT 1614 Query 1629 GAACTTATAACTCTGTTCCTTCAGAATAACTACAAGTTGGTAGTCATCTCAATGGAATTC 1688 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1615 GAACTTATAACTCTGTTCCTTCAGAATAACTACAAGTTGGTAGACATCTCAATGGAATTC 1674 Query 1689 TTTCGGTGTATGCCTAGTCTAACTGTTTTGGATCTATCAGAAAATCACAGTCTTAGTGAA 1748 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1675 TTTCGGTGTATGCCTAGTCTAGCTGTTTTGGATCTATCAGAAAATCACAGTCTTAGTGAA 1734 Query 1749 CTGCCAGAAGAAATATCAGAGTTGGTGTCCTTGCAGTATCTTGATTTGTCCGGGACATAT 1808 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1735 CTGCCAGAAGAAATATCAGAGTTGGTGTCCTTGCAGTATCTTGATTTGTCCGGGACATAT 1794 Query 1809 ATAGAGCGACTACCTCATGGTTTACAAAAGTTGAGAAAGTTAGTACATCTGAAACTGGAA 1868 |||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| Sbjct 1795 ATAGAGCGACTACCTCATGGTTTACACGAGTTGAGAAAGCTAGTACATTTGAAACTGGAA 1854 Query 1869 AGGACGAGGAGACTTGAGAGCATTTCAGGGATATCATATTTGTCAAGTTTGAGAACATTA 1928 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1855 AGGACGAGGAGACTTGAGAGCATTTCAGGGATATCATATTTGTCAAGTTTGAGAACATTG 1914 Query 1929 AGACTAAGAGATTCAAAAACGACACTAGAGACGAGCCTAATGAAAGAACTACAGCTCTTA 1988 ||||||||||||||||||||||||||||| ||| | || ||||||||||||||||||||| Sbjct 1915 AGACTAAGAGATTCAAAAACGACACTAGATACGGGGCTTATGAAAGAACTACAGCTCTTA 1974 Query 1989 GAACATTTAGAACTCATAACCACAAATATCTCCTCAAGTTTGGTTGGGGAATTGGTATAT 2048 |||||||||||||||||||||||| ||||||| ||| ||||||||||||||||| | | | Sbjct 1975 GAACATTTAGAACTCATAACCACAGATATCTCGTCAGGTTTGGTTGGGGAATTGTTCTGT 2034 Query 2049 TATCCCAGAGTAGGGAGATGTATTCAACACATTTTTATTAGGGACCACTGGG-GCCGTCC 2107 ||||||||||| |||||||||||||||||||||| |||||||||||| |||| || |||| Sbjct 2035 TATCCCAGAGTTGGGAGATGTATTCAACACATTTATATTAGGGACCATTGGGAGC-GTCC 2093 Query 2108 AGAGGAATCAGTAGGAGTATTAGTTTTGCCAGCTATA-ACTAATCTCTGTTACATCTCCA 2166 |||||||| ||||||||||||||||||||||||||| | |||||| ||||||||||||| Sbjct 2094 GGAGGAATCCGTAGGAGTATTAGTTTTGCCAGCTATACA-TAATCTGTGTTACATCTCCA 2152 Query 2167 TATGGAACTGTTGGATGTGGGAGATAATGATAGAGAAGACACCATGGAACAAAAATCTAA 2226 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 2153 TATGGAACTGTTGGATGTGGGAGATAATGATAGAGAAGACACCATGGAAAAAAAATCTAA 2212 Query 2227 CAAGTCCCAACTTCTCAAACCTCTCTAATGTGCGTATAGAAGGGTGTGATGGTTTAAAGG 2286 ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 2213 CAAATCCCAACTTCTCAAACCTCTCTAATGTGCGAATAGAAGGGTGTGATGGTTTAAAGG 2272 Query 2287 ATTTGACGTGGCTGCTGTTTGCTCCAAACCTTATTAATCTTCGCGTTTGGGGGTGTAAGC 2346 ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct 2273 ATTTGACGTGGCTGCTGTTTGCTCCAAACCTGATCAATCTTCGCGTTTGGGGGTGTAAGC 2332 Query 2347 ATCTGGAGGATATAATAAGCAAAGAGAAAGCTGCGAGTGTTCTAGATAAGGAGATTCTTC 2406 |||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||| Sbjct 2333 ATCTGGAGGATATAATAAGCAAAGAGAAAGCTGCAAGTGTTTTAGAAAAGGAGATTCTTC 2392 Query 2407 CTTTCCAGAAACTAGAATGCCTGAACTTGTATCAGTTGTCTGAGCTGAAGAGCATCTACT 2466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2393 CTTTCCAGAAACTAGAATGCCTGAACTTGTATCAGTTGTCTGAGCTGAAGAGCATCTACT 2452 Query 2467 GGAATGCTCTGCCTTTTCAGCGTTTGAGATGTCTTGACATACTAAACAATTGTCCGAAGC 2526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2453 GGAATGCTCTGCCTTTTCAGCGTTTGAGATGTCTTGACATACTAAACAATTGTCCGAAGC 2512 Query 2527 TGAGAAAGCTTCCGCTGGATTCTAAAAGTGTTGTAAAAGTTGAAGAATTTGTCATAAAAT 2586 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 2513 TGAGAAAGCTTCCGCTGGATTCTAAAAGTGTTGTCAAAGTTGAAGAATTTGTCATAAAAT 2572 Query 2587 ACAAGGAGAAAAAATGGATAGAAAGAGTTGAATGGGAGGACGAAGCGACACGACAGCGTT 2646 ||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||| Sbjct 2573 ACAAGGAGAAAAAATGGATAGAAAGAGTTGAATGGGAGGACGAAGCGACACAATACCGTT 2632 Query 2647 TCTTACCTTCTTGTAGGCTGCGTTGA 2672 |||||||| ||||||||||||||||| Sbjct 2633 TCTTACCTACTTGTAGGCTGCGTTGA 2658 > AT1G12220.1 | Symbols: RPS5 | Disease resistance protein (CC-NBS-LRR class) family | chr1:4144935-4147817 FORWARD LENGTH=2883 Length=2883 Score = 1391 bits (753), Expect = 0.0 Identities = 1653/2078 (80%), Gaps = 100/2078 (5%) Strand=Plus/Plus Query 10 ATTTTGCAGAGATGGGAGGTTGTATCTCTGTCTCGTTGTCATGTGATCGAGTAGTGAATC 69 ||| ||||||||||||||||||| ||||||| || ||| ||||||||| |||||||| || Sbjct 66 ATTGTGCAGAGATGGGAGGTTGTTTCTCTGTTTCATTGCCATGTGATCAAGTAGTGAGTC 125 Query 70 AGATT-TCTCAG-TGTTTATGTGTCAGTGGTAA-TTATATTCATAACCTCTCTGAGAATC 126 || || |||||| || ||||||||||| || || ||||||||| || ||||| |||||| Sbjct 126 AG-TTCTCTCAGTTG-TTATGTGTCAG-GGGAAGTTATATTCACAATCTCTCCAAGAATC 182 Query 127 TGGCTTCTCTGCAGAAAGCCATGGGAGTGCTCAAGGCTAAGCGAGATGACGTGCA-AGGA 185 |||||||||||||||| |||||| || ||||||||||| || | |||| ||| | | || Sbjct 183 TGGCTTCTCTGCAGAAGGCCATGCGAATGCTCAAGGCTCGGCAATATGATGTG-ATAAGA 241 Query 186 AGGGTAGATAGAGAAGAGTTTACTGGGCATCGTCGAAGGCTTGCTCAAGTCCAGGTATGG 245 ||| | || | |||||||||||| |||| || | ||||||| | ||||| ||||||||| Sbjct 242 AGGTTGGAAACAGAAGAGTTTACAGGGCGTCAACAAAGGCTTTCCCAAGTTCAGGTATGG 301 Query 246 CTTAC-ACGTATCCTAACCA-TCGAAAACCAATTCAATGATCTTCTTAGCACT--TGTAA 301 ||||| | || |||||| || || ||||||| || |||||||| ||| | | | || || Sbjct 302 CTTACTA-GTGTCCTAATCATTC-AAAACCAGTTTAATGATCTGCTTCGTAGTAATG-AA 358 Query 302 CGCTGAGATTCAAAGGTTGTGTCTCTGTGGTTTTTGCTCTAAAAATATGAAAATGAGCTA 361 | |||| |||||||||||||||| |||||||| ||||| ||| || ||||| ||||||| Sbjct 359 -GTTGAGCTTCAAAGGTTGTGTCTTTGTGGTTTCTGCTCCAAAGATTTGAAATTGAGCTA 417 Query 362 TCTTTATGGGAAAAGAGTTATTGTGTTGTTGAGGGAGGTTGAGGGTCTCAGCTCTCAAGG 421 || |||||||||||||||||| || |||||| ||| |||||| ||||||| |||||||| Sbjct 418 TCGTTATGGGAAAAGAGTTATCATGATGTTGAAGGAAGTTGAGAGTCTCAGTTCTCAAGG 477 Query 422 AGAATTTGATGTGGTGACTGAGGCAACTCCGATAGCTGAGGTTGAAGAGTTGCCTATTCA 481 | ||||||||||| |||||||||||||| | ||||| || || ||| | ||| |||| Sbjct 478 ATTCTTTGATGTGGTTTCTGAGGCAACTCCGTTTGCTGATGTGGATGAGATCCCTTTTCA 537 Query 482 ATCCACAATTGTTGGTCAGGA-TTCGATGCTCGACAAGGTATGGAACTGTCTAATGGAAG 540 | ||||||||||||||||||| | ||||| || |||| ||||||| |||| ||||||| Sbjct 538 ACCCACAATTGTTGGTCAGGAGAT-AATGCTTGAAAAGGCATGGAACCGTCTCATGGAAG 596 Query 541 ATAAAGT-CGGGATTGTGGGTCTGTATGGTATGGGTGGAGTAGGAAAAACCACCCTTCTC 599 || | | ||||||| |||||||||| |||||||| |||||||| ||||| || || ||| Sbjct 597 ATGGA-TCCGGGATTTTGGGTCTGTACGGTATGGGGGGAGTAGGCAAAACGACACTACTC 655 Query 600 ACGCAGATCAACAATAAGTTTTCTAAACTAGGTGGTGGATTTGATGTCGTGATATGGGTT 659 ||| ||||||||||||||||||||||| ||| || |||||||||| |||||||||||| Sbjct 656 ACGAAGATCAACAATAAGTTTTCTAAAATAGATGACAGATTTGATGTTGTGATATGGGTT 715 Query 660 GTGGTGTCTAAAAATGCAACAGTACATAAGATTCAAAGAAG-CATCGGGGAAAAACTAGG 718 || ||||||| || | ||||||| | |||||| ||||| || ||| | ||||| |||| Sbjct 716 GTTGTGTCTAGAAGTTCAACAGTCCGTAAGATACAAAG-AGACATAGCAGAAAAGGTAGG 774 Query 719 CCTTGTTGGGAA-GAAGTGGGA-CGAGAAAAACAAAAACCAGAGAGCCCTTGACATCCAC 776 ||||| ||||| | ||| ||| |||||||||| | ||||||| |||| ||||||||||| Sbjct 775 CCTTG-GGGGAATGGAGT-GGAGCGAGAAAAACGATAACCAGATAGCCGTTGACATCCAC 832 Query 777 AACGTTCTTAGGAGGAAG-AAGTTTGTCTTGTTGTTGGATGATATATGGGAAAAAGTGAA 835 || || ||||||| || | |||||||| || ||||||||||| |||||||| |||||||| Sbjct 833 AATGTCCTTAGGA-GACGAAAGTTTGTTTTATTGTTGGATGACATATGGGAGAAAGTGAA 891 Query 836 CTTAAATGTGATTGGAGTCCCGTATCCGAGTGGAGAAAACGGATGCAAAGTAGCATTCAC 895 ||||| | | |||||||||||||||| || ||| ||||||||||| ||||||||||| Sbjct 892 TTTAAAAGCGGTTGGAGTCCCGTATCCAAGCAAAGATAACGGATGCAAGGTAGCATTCAC 951 Query 896 CACTCGTTCTAAG-GAAGTTTGTGGACGCATGGGGGTAGATGACCCGATGGAAGTCAGTT 954 ||||||||| | || || ||||| ||||||||||| ||||| ||||||||||| || | Sbjct 952 TACTCGTTCT-CGAGATGTGTGTGGGCGCATGGGGGTTGATGATCCGATGGAAGTTAGCT 1010 Query 955 GTTTAGACACCAGAA-ACGCCTGGGATTTGTTGAAAAAGAAAGTGGGGGAAAACACATTA 1013 || || | ||| ||| | | ||||||||||| ||| ||| || ||| |||| ||| | Sbjct 1011 GTCTACA-ACCCGAAGAATCTTGGGATTTGTTTCAAATGAAGGTTGGGAAAAATACACTG 1069 Query 1014 GGAAGCCACCCAGACATTCCCCAG-CTTGC-ACGCAAAGTTTCG-GA-AAAATGTCGTGG 1069 ||||| |||||||||||| ||| | ||||| | | |||| ||| | ||||||||||| Sbjct 1070 GGAAGTCACCCAGACATT-CCCGGACTTGCTA-GAAAAG--TCGCTAGGAAATGTCGTGG 1125 Query 1070 TCTACCACTAGCACTGAATGTTCTTGGTG-AGACCATGTCATGCAAGAGGACAATACAAG 1128 |||||| ||||||| |||||| | |||| || | ||| ||||||| || ||| |||| | Sbjct 1126 CCTACCATTAGCACTCAATGTTATCGGTGAAG-CTATGGCATGCAAAAGAACAGTACATG 1184 Query 1129 AATGGTGTCATGCAATTGAGGTTTTGACTTCATCTGCTACAGATTTTTCAGGAATGGAAG 1188 ||||||||||||| ||||| ||||| || |||||||| | |||||||||||| ||||||| Sbjct 1185 AATGGTGTCATGCCATTGACGTTTTAACATCATCTGCCATAGATTTTTCAGGTATGGAAG 1244 Query 1189 ATGAGGTTCTTCCA-ATTTTAAAATATAGCTATGATAGCTTGAATGGGGAG--GATGCAA 1245 |||| ||| |||| |||| || ||||||||||||| || ||||||||| |||| || Sbjct 1245 ATGAAATTC-TCCATGTTTTGAAGTATAGCTATGATAATTTAAATGGGGAGCTGATG-AA 1302 Query 1246 AGTCGTGTTTCCTATATTGCTCTCTATTTCCTGAAGATTTTAAAATCAGA-AAAGAGATG 1304 | || || ||||| ||||||||||| ||||||||||| | | || || |||||| | Sbjct 1303 A-TCCTGCTTCCTCTATTGCTCTCTGTTTCCTGAAGACTATCTTAT-TGATAAAGAGGGG 1360 Query 1305 TTTATTGAATACTGGATTTGTGAGGGATTCATAGAA-G-AAAAGCAAGGTAGAGAAAAAG 1362 || | || |||||||| |||||||||||||| || | ||||| |||| |||| | | | Sbjct 1361 TTGGTAGACTACTGGATAAGTGAGGGATTCATA-AATGAAAAAG-AAGGCAGAG-AGAGG 1417 Query 1363 CAT-TCAACCAAGGTTATGATATACTCGGTACTCTTGTCCGTTCATCTTTATTGTTGGAG 1421 || | |||||||||||||| ||| | ||||| ||||||||| ||| ||| ||||||||| Sbjct 1418 AATATTAACCAAGGTTATGAGATAATTGGTACCCTTGTCCGTGCATGTTTGTTGTTGGAG 1477 Query 1422 G-ATAAA-G-----AT--TTTGTGAGTATGCATGATGTGGTTCGTGAGATGGCTCTGTGG 1472 | | ||| | || |||| ||||||||||||||||||||||||||||| ||| Sbjct 1478 GAAGAAAGGAACAAATCAAACGTGAAAATGCATGATGTGGTTCGTGAGATGGCTCTATGG 1537 Query 1473 ATATCATCTGATCTTGGAAAGCATAAAG-AGCGATGTATTGTGCAAGCCGGTGTTGGATT 1531 |||||||| |||||||| ||||| |||| || ||||||||||| ||| |||||||| || Sbjct 1538 ATATCATCCGATCTTGGGAAGCA-AAAGGAGAAATGTATTGTGCGAGCTGGTGTTGGGTT 1596 Query 1532 A-GATGAACTACCTGAAGTCAAGAATTGGAG-AGCTGTGA-AAAGGATGTCGCTAATGAA 1588 | | |||| |||| |||||||| |||||| | |||||| |||| || || | ||||| Sbjct 1597 ACG-TGAAGTACCAAAAGTCAAGGATTGGAACA-CTGTGAGAAAG-ATTTCTTTGATGAA 1653 Query 1589 TAATAATTTTGAAAACATATATGGCTGTCCCGAATGCGTTGAACTTATAACTCTGTTCCT 1648 |||| | ||||| | |||| || | ||| ||| || | || ||||| |||||| || || Sbjct 1654 TAATGAGATTGAAGAGATATTTGACAGTCACGAGTGTGCTGCACTTACAACTCTATTTCT 1713 Query 1649 TCAGAATAACTACAAGTTGGTAGTCATCTCAA-TGGAATTCTTTCGGTGTATGCCT-AGT 1706 || || ||| || || |||| ||||| || |||||||||| ||||||||| | | Sbjct 1714 CCAAAAGAACGAC--GT-GGTAAAGATCTCGGCTG-AATTCTTTCGATGTATGCCTCA-T 1768 Query 1707 CTAACTG-TTTTGGATCTATCAGAAAATCACAGTCTTAGTGAACTGCCAGAAGAAATATC 1765 || || |||| ||||||||||| ||||| ||||||| |||| | |||||||||||||| Sbjct 1769 CTGG-TGGTTTTAGATCTATCAGAGAATCAGAGTCTTAATGAATTACCAGAAGAAATATC 1827 Query 1766 AGAGTTGGTGTCCTTGCAG-TATCTTGAT-TTGTCCGGGACATATATAGAGCGACTACCT 1823 |||| ||| || ||| || ||| || | ||||| |||| |||| | | |||||| Sbjct 1828 AGAGCTGGCCTCTTTG-AGATAT-TTCAACTTGTCATATACATGTATACATCAACTACC- 1884 Query 1824 CAT-GGTTTACAAA-AGTTGAGAAAGTTAGTACATCTGAAACTGGAA-AGGACGAGGAGA 1880 | | |||||| | | |||| |||| || |||||||||| || ||| | | ||| || Sbjct 1885 CGTTGGTTTATGGACA-TTGAAAAAGCTAATACATCTGAATCTCGAACAC-ATGAGCAGT 1942 Query 1881 CTTGAGAGCAT-TTCAGGGATATCATATTTGTC-AAGTTTGAGAACATTAAGACTAAGAG 1938 |||| ||| || || |||||||||| |||||| || |||||| ||||| ||||| ||| Sbjct 1943 CTTGGGAGTATATT-AGGGATATCAAATTTGTGGAA-TTTGAGGACATTGGGACTACGAG 2000 Query 1939 ATTCAAAAAC-GACACTAGAGACGAGCCTAATGAAAGAACTACAGCTCTTAGAACATTTA 1997 |||| | | | | ||||| | ||| || |||| || || ||||||||||||||| || Sbjct 2001 ATTCCAGA-CTGTTGCTAGATATGAGTTTAGTGAAGGAGCTGCAGCTCTTAGAACATCTA 2059 Query 1998 GAACTCATAACCACAA-ATATCTCCTCAAGTTTGGTTG 2034 ||| | |||||| | | |||| || ||||||||||||| Sbjct 2060 GAAGTTATAACC-CTAGATATATCATCAAGTTTGGTTG 2096 > AT1G12280.1 | Symbols: | LRR and NB-ARC domains-containing disease resistance protein | chr1:4174875-4177559 REVERSE LENGTH=2685 Length=2685 Score = 1312 bits (710), Expect = 0.0 Identities = 2107/2749 (77%), Gaps = 225/2749 (8%) Strand=Plus/Plus Query 21 ATGGGAGGTTGTATCTCTGTCTCGTTGTCATGTGATCG-AGTAGTGAATCAGATTTCTC- 78 ||||||| |||| | | ||||||| || |||||| | ||| |||||||| || |||| Sbjct 1 ATGGGAGCTTGTTTAACACTCTCGTTCTCTTGTGAT-GAAGTTGTGAATCAAATCTCTCA 59 Query 79 AGTGTTTATGTGTC-A-GTGGTAATTATATTCATAACCTCTCTGAGAATCTGGCT-TCTC 135 || ||||||| || | |||| ||||||| | ||||| ||||| | | | || Sbjct 60 AG-GTTTATGCATCAACGTGG--GTTATATTTGCGAGCTCTCCAAGAATGTAG-TGGCTA 115 Query 136 TGCAGAAAGCCATGGGAGTGCTCAAGGCTAAGCGAGATGACGTGCAAGGAAGGGTAGATA 195 || |||||| ||||| |||||| ||| ||||||||||| ||| || |||||||||||| Sbjct 116 TGAAGAAAGACATGGAAGTGCTGAAGAAAAAGCGAGATGATGTGAAAAGAAGGGTAGATA 175 Query 196 GAGAAGAGTTTACTGGGCATCGTCG-AAGGCTTGCTCAAGTCC-AGGTATGGCTTACACG 253 ||||||||| || ||| |||| | ||||||| ||||||||| ||| ||||||| ||| Sbjct 176 TAGAAGAGTTCACAAGGCGTCGT-GAAAGGCTTTCTCAAGTCCAAGG-ATGGCTT--ACG 231 Query 254 TAT-CCT-AACCATCGAAAACCAATTCAATGATCTTCTTAGCACTTGTAACGCTGAGATT 311 || || ||| |||| || |||||||||| || |||| |||| | |||||||| || Sbjct 232 AATGTCTCGACCGTCGAGAATAAATTCAATGAACTGCTTACCACTAATGACGCTGAGCTT 291 Query 312 CAAAGGTTGTGTCTCTGTGGTTTTTGCTCTAAAAATATGAAAATGAGCTATCTTTATGGG 371 |||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||| Sbjct 292 CAAAGGTTGTGTCTCTTTGGATTTTGCTCTAAAAATGTGAAAATGAGCTATCTTTATGGG 351 Query 372 AAAAGAGTTATTGTGTTGTTGAGGGAGGTTGAGGGTCTCAGCTCTCAAGGAGAATTTGAT 431 ||||| ||| | || |||||| |||| ||||| |||| || ||||||||||| |||||| Sbjct 352 AAAAGGGTTGTCCTGATGTTGAAGGAGATTGAGAGTCTTAGTTCTCAAGGAGATTTTGAT 411 Query 432 G-TGGTGACTG-AGGCAACTCCGATAGCTGAGG-TTGAAGAGTTGCCTATTCAATCC-AC 487 || ||||| || || |||| |||||| ||| |||||||| ||||||||||| || || Sbjct 412 ACTG-TGACTTTAGCCA-CTCCAATAGCT-AGGATTGAAGAGATGCCTATTCAA-CCTAC 467 Query 488 AATTGTTGGTCAGGATTCGATGCTCGACAAGG-TATGGAACTGTCTAATGGAAGATAAAG 546 ||| || |||||||| | |||||||| |||| |||||| | |||| | ||||| || Sbjct 468 AATCGTAGGTCAGGAAACAATGCTCGA-AAGGGTATGGACCCGTCTCACAGAAGACGGAG 526 Query 547 TCGGGATTGTGGGTCTGTATGGTATGGGTGGAGTAGGAAAAACCACCCTTCTCACGCAGA 606 || |||||||||||| ||||| |||||||||||||| ||||||||||||||||| | || Sbjct 527 ACGAGATTGTGGGTCTTTATGGCATGGGTGGAGTAGGCAAAACCACCCTTCTCACAC-GA 585 Query 607 -TCAACAATAAGTTTTCT-AAACTAGGTGGTGGATTTGATGTCGTGATATGGGTTGTGGT 664 ||||||| ||||||||| ||| | || | || |||| || ||||||||||| ||||| Sbjct 586 ATCAACAACAAGTTTTCTGAAAA-ATGTAGCGGGTTTGGGGTTGTGATATGGGTGGTGGT 644 Query 665 GTCTAAAAATGCA-ACAGTACATAAGATTCAAAGA-AGCATCGGGGAAAA-ACTAGGCCT 721 |||||| | | || | | | |||| ||||||| || | ||||||| || | ||||| ||| Sbjct 645 GTCTAAGAGTCCAGATA-TCCATAGGATTCAAGGAGA-CATCGGG-AAGAGACTAGACCT 701 Query 722 TGTTGG-GAAGAAGTGGGACGA-GAAAAACAAAAACCAGAGAGCCCTTGACATCCACAAC 779 || || ||||| |||||| | | ||| |||| |||||||||||||||||| |||| Sbjct 702 TGGAGGCGAAGA-GTGGGATAATGTAAATGAAAA-CCAGAGAGCCCTTGACATATACAAT 759 Query 780 GTTCTTAGGAGG-AAGAAGTTTGTCTTGTTGTTGGATGATATATGGGAAAAAGTGAACTT 838 || ||| ||| || || ||||| ||||||||||||||||||||||| |||||||| || Sbjct 760 GTCCTTGGGAAACAAAAA-TTTGTGTTGTTGTTGGATGATATATGGGAGAAAGTGAATTT 818 Query 839 A-AATGTGATTGGAGTCCCGTATCCGAGTGGAGAAAACGGATGCAAAGTAGCATTCACCA 897 | || ||| |||||||||| ||||| || || |||| ||||||||||||| |||||||| Sbjct 819 AGAA-GTGCTTGGAGTCCCTTATCCAAGCAGACAAAATGGATGCAAAGTAGTATTCACCA 877 Query 898 CTCGTTCTA-AGGAAGTTTGTGGACGCATGGGGGTAGATGACCCGATGGAAGTCAGTTGT 956 ||||||||| || | |||||||| || ||| |||| ||||||||||||||||||||||| Sbjct 878 CTCGTTCTAGAG-ATGTTTGTGGGCGTATGCGGGTTGATGACCCGATGGAAGTCAGTTGC 936 Query 957 TTAGACACC-A--GAAACGCCTGGGATTTGTTGAAAAAGAAAGTGGGGGAAAACACATTA 1013 |||| ||| | ||| |||||||| ||||| ||| |||||| || ||||||||||| Sbjct 937 CTAGA-ACCCAACGAA--GCCTGGGAATTGTTCCAAATGAAAGTTGGAGAAAACACATT- 992 Query 1014 GGAAG-CCACCCAGACATTCCCCAGCTTGCACGCAAAGTTTC-GGAAAAATGTCGTGGTC 1071 | ||| ||| ||||||||||| | |||||| | |||||| | |||||| ||| |||| | Sbjct 993 GAAAGGCCATCCAGACATTCCTGAACTTGCAAGAAAAGTTGCTGGAAAA-TGTTGTGGCC 1051 Query 1072 TACCACTAGCACTGAATGTTC-TTGGTGAGACCATGTCATGCAAGAGGACAATACAAGAA 1130 ||||| | ||||| ||||| | |||| ||||||||| ||||||| |||| |||||||| Sbjct 1052 TACCATTGGCACTTAATGT-CATTGGCGAGACCATGGCATGCAAAAGGATGGTACAAGAA 1110 Query 1131 TGGTGTCATGCAATTGAGGTTTTGA-CTTCATCTGCTACAGATTTTTCAGGAATGGAAGA 1189 ||| || | |||||||| ||||||| || ||| |||| |||| || | || |||||| | Sbjct 1111 TGGCGTAACGCAATTGACGTTTTGAGCT-CATATGCTGCAGAATTCCCTGGTATGGAACA 1169 Query 1190 TGAGGTTCTTCCAATTTTAAAATATAGCTATGATAGCTTGAATG-GG-G-AGGATGCAAA 1246 | ||||||| ||| |||| ||||||||||||| || || || | ||| || ||| Sbjct 1170 A-A--TTCTTCCTATTCTAAAGTATAGCTATGATAATTTAAACAAGGAGCAGG-TG-AAA 1224 Query 1247 GTCGTGTTTCCTATATTGCTCTCTATTTCCTGAAGATTTTAAAATCAGAAAA-GAGATGT 1305 | |||||||||||||||||||| ||||||||||||| | || ||||| |||| || Sbjct 1225 C-CATGTTTCCTATATTGCTCTCTGTTTCCTGAAGATTATCGTATG-GAAAAAGAGAGGT 1282 Query 1306 TTATTGAATACTGGATTTGTGAGGGATTCATAGAAGAAAA-GCAAGGTAGAGAAAAAGCA 1364 | || || || ||||| ||||||||||||||||| ||||| | ||| |||||||| |||| Sbjct 1283 TGATAGACTATTGGATATGTGAGGGATTCATAGATGAAAATGAAAG-TAGAGAAAGAGCA 1341 Query 1365 TTCAA-CCAAGGTTATGATAT-ACTCGGTACTC-TTGTCCGTTCATCTTTATTGTTGGAG 1421 || || |||||||||||| || | | |||| || ||||||| ||| ||| ||||||||| Sbjct 1342 TT-AAGCCAAGGTTATGAGATCATT-GGTA-TCCTTGTCCGAGCATGTTTGTTGTTGGAG 1398 Query 1422 GA---TA--AA----GATTTTGTGAGTATGCATGATGTGGTTCGTGAGATGGCTCTGTGG 1472 || || || || || | ||||||||||||||||| ||||||||||| ||| Sbjct 1399 GAAGCTATCAATAAAGAACAAGTTAAAATGCATGATGTGGTTCGGGAGATGGCTCTATGG 1458 Query 1473 ATAT-CATCTGATCTTGGA-AAGCATAAAGAGCGATGTATTGTGCAAGCCGGTGTTGGAT 1530 || | ||||||||||||| || |||||||| ||||||||||||||| ||||||||||| Sbjct 1459 AT-TGCATCTGATCTTGGGGAA-CATAAAGAAAGATGTATTGTGCAAGTCGGTGTTGGAT 1516 Query 1531 TA-GATGAACTACCTGAA-GTCAAGAATTGGAGAGCTGTGAAAAGGATGTCGCTAATG-A 1587 || | ||| |||| ||| |||||||| ||||| |||||| |||||||||||| ||| | Sbjct 1517 TACG-TGAGGTACC-GAAAGTCAAGAACTGGAGTTCTGTGAGAAGGATGTCGCTGATGGA 1574 Query 1588 ATAATAATTTTGAAAACATATATGGCTGTCCCGAATGCGTTGAACTTATAACTCTGTTCC 1647 | ||| | |||||| ||| |||| ||||||||||| | ||||||| ||||||||||| Sbjct 1575 A-AATGAGATTGAAATTTTATCTGGCAGTCCCGAATGCCTGGAACTTACAACTCTGTTCC 1633 Query 1648 TTCAGAATAACT-A--CAAGTTGGTAG-TCATCTCA-ATGGAATTCTTTCGGTGTATGCC 1702 ||||||| || | | || ||| || | ||||| ||| ||||||| |||||||| || Sbjct 1634 TTCAGAAAAA-TGATTCA--TTGCTACAT-ATCTCGGATG-AATTCTTCCGGTGTATCCC 1688 Query 1703 TA-GTCTAACTGTTTTGGATCTATCAGAAAAT-CACAGTCTTAGTGAACT-GCCAGAAG- 1758 | | ||| ||||||||||||||||| ||| || ||||| | ||| | ||| || Sbjct 1689 AATG-CTAGTTGTTTTGGATCTATCAGGGAATTCA-AGTCTCCG-GAAATTGCCT-AACC 1744 Query 1759 AAATATCAGAGTTGGTGTCCTTGCAGT-ATCTTGATTTGTCCG-GGACATATAT-AGAGC 1815 |||||||| |||| || ||||||| || ||||||| ||||| | ||||||| || | ||| Sbjct 1745 AAATATCAAAGTTAGTCTCCTTGC-GTTATCTTGACTTGTC-GTGGACATACATTA-AGC 1801 Query 1816 GACTACCTCAT-GGTTTACAAAAGTTGAGAAAGTT-AGTACATCTGAAACTGGAA-AGGA 1872 | |||||| | ||| ||||| |||||| |||| | || | || ||| | |||| | | Sbjct 1802 GGCTACCTG-TCGGTCTACAAGAGTTGAAAAAGCTCAG-ATATTTGAGATTGGATTAC-A 1858 Query 1873 CGAGGAGACTTGAGAGCATTTCAGGGATATCATATTTGTCAAGTTTGAG-AACATTA-AG 1930 || ||||||| |||| ||||||||||||||| || | ||||||||||| || ||| | Sbjct 1859 TGAAGAGACTTAAGAGTATTTCAGGGATATCAAATATATCAAGTTTGAGGAA-ATTGCA- 1916 Query 1931 ACTAAGAGATTCAAAAACGACACTAGAGACGAGCCTAATGAAAGAACTACAGCTCTTAGA 1990 ||| | | || |||| | | ||||| | |||| || || | || | ||||| ||||| Sbjct 1917 ACTTTTACAGTCTAAAATGTCGCTAGACATGAGCTTAGTGGAGGAGTTGCAGCTATTAGA 1976 Query 1991 ACATTTAGAACT-CATAACCACAAATATCTCCTCAAGTTTGGTTG-GG-GAA-TTGGTAT 2046 |||||||||| | | ||| || || |||| ||||| ||||| | || ||| ||| || Sbjct 1977 ACATTTAGAAGTTC-TAAACATAAGTATCAAGTCAAGCTTGGTAGTGGAGAAGTTGTTAA 2035 Query 2047 ATTATCCCAGAGTAGG-GAGATGTATTCAACA-CATTTTTA-TTAGGGACCACTGGGGCC 2103 || |||||| || || || |||| ||||| | | || || |||| | || | Sbjct 2036 ATGCTCCCAG-GTTGGTGAAATGTCTTCAA-ATC-TTAGTACTTAG--A-----GGAGT- 2084 Query 2104 GTCCAG-AGGAATCAGTA-GGAGTATT-AGTTTTGCCAGCTATA-ACTAATCTCTGTTAC 2159 || || | |||||| | |||||||| | ||| ||||| ||| | ||||||| | | Sbjct 2085 -TC-AGGAAGAATCA-TCCGGAGTATTGACTTT-GCCAGATATGGA-TAATCTCAATAA- 2138 Query 2160 A-TC-TCCATATGGAACTGTTGGA-TGTGGGAGATAATGATAGAGAAGACACCATGGAAC 2216 | || || ||| |||| ||| ||| |||| ||||||| |||||||| || | | | | | Sbjct 2139 AGTCATC-ATAAGGAAGTGT-GGAATGTGTGAGATAAAGATAGAGAGGAAAACTTT-ATC 2195 Query 2217 AAAA--ATCTAACA-A-GTCCCAA--CT---T-C-TC-A-AACCTCTCTAATGTGCGTAT 2263 | | ||| |||| | ||||||| || | | || | |||||||| | ||||| ||| Sbjct 2196 ATTATCATCGAACAGAAGTCCCAAAACTCAATTCCTCCATAACCTCTCCACTGTGCATAT 2255 Query 2264 A-GAAGGGTGTGATGGTTTAAAGGATTTGACGTGGCTGCTGTTTGCTCCAAACCTTATTA 2322 | | || ||||||||| | ||||||||||||||| || |||| ||||| ||||| | || Sbjct 2256 AAGTAGC-TGTGATGGTCTGAAGGATTTGACGTGGTTGTTGTTCGCTCCTAACCTCACTA 2314 Query 2323 ATCTTCGCG-TT-TGGGGGT-GTAAGC-ATCTGGA-GGATATAATAAGCAAAGAGAAAGC 2377 ||| || | || ||| | | || | | | || ||| ||||||| | |||||||||| Sbjct 2315 GTCT-CGAGGTTCTGGAC-TCGGAA-CTAG-TAGAAGGA-ATAATAAACCAAGAGAAAGC 2369 Query 2378 TGCGAGTGTTCTAGATAAGGAGATTC-TTCCTTTCCAGAAACTAGA-ATGCCTGAA-CTT 2434 | || | | || | || || | ||||||||||||||||||| | | || | | | Sbjct 2370 TATGACTATG--AG-T--GGT-AT-CATTCCTTTCCAGAAACTAGAGA-GTCT-ACGCCT 2420 Query 2435 GTATCAGT-T-GTCTGA-GCTGAAGAGCATCTACTGG-AATGCTCTGCCTTTTC-AGCGT 2489 | || | | | | || | ||| ||||||||||||| || ||||| |||||| | || Sbjct 2421 ACA-CAATCTAG-C-GATGTTGAGGAGCATCTACTGGCAAC-CTCTGTCTTTTCCAT-GT 2475 Query 2490 TTGA-GATGTCTTGACATACTAAACAATTGTCC-GAAGCTGAGAAAGCTTCCGCTGGATT 2547 ||| || || ||||| | || ||||| || ||||||||||||||| |||||| Sbjct 2476 CTGAAGACAA-TTCACATA--ACG-AAGTGTCCTGA-GCTGAGAAAGCTTCCATTGGATT 2530 Query 2548 CTAAAAGTGTTGTAAAAGTTGAAGAATTTGTCATAAAATAC-AAGGAGAAAAAATGGATA 2606 || ||| || ||| | ||||||| ||||||| || ||| ||| || || ||||| | Sbjct 2531 CTGAAATTGCCATAAGGGATGAAGAACTTGTCATTAAGTACCAAG-AGGAAGAATGGCTT 2589 Query 2607 GAAAGAGTTGAATGGGAGGACGAAGCGACACGACAGCGTTTCTTACCTT 2655 ||||| ||||||||||| ||||||| ||| ||| ||||||||||||| Sbjct 2590 GAAAGGGTTGAATGGGACAACGAAGCCACAAGACTCCGTTTCTTACCTT 2638 > AT4G14610.1 | Symbols: | pseudogene, disease resistance protein (CC-NBS-LRR class), putative, domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein.; blastp match of 45% identity and 2.2e-162 P-value to GP|24461866|gb|AAN62353.1|AF506028_20|AF506028 NBS-LRR type disease resistance protein {Poncirus trifoliata} | chr4:8380848-8383496 REVERSE LENGTH=2649 Length=2649 Score = 1131 bits (612), Expect = 0.0 Identities = 1646/2129 (77%), Gaps = 136/2129 (6%) Strand=Plus/Plus Query 21 ATGGGAGGTTGTATCTCTGTCTCGTTGTCATGTGATCGAG-TAGTGAATCAGATT-TCTC 78 ||||||||||||||||| |||||| |||||||||||| || | ||||||||| || |||| Sbjct 1 ATGGGAGGTTGTATCTCGGTCTCGGTGTCATGTGATC-AGTTTGTGAATCAG-TTCTCTC 58 Query 79 AGTGTTTATGTGTCAGTGGTAA--TTATATTCATAACC-TCTCTGAGAATCTGGCTTCTC 135 | || ||||| || | | || ||| ||||||| || || | |||||||| || ||| Sbjct 59 AATGGTTATGCGTTA--GAAAAGGTTACATTCATAGCCTTC-CCGAGAATCTAGCAGCTC 115 Query 136 TGCAGAAAGCCATGGGAGTGCTCAAGGCTAAGCGA-GATGACGTGCAAGGAAGGGTAGAT 194 | || |||||||| | ||| |||||| | |||| | ||||| ||| || ||||||| ||| Sbjct 116 TACAAAAAGCCATTGAAGTTCTCAAGACAAAGC-ACGATGATGTGAAAAGAAGGGTCGAT 174 Query 195 AGAGAAGAGTTTACT-GGGCATCGTCGA-AGGCTTGCTCAAGTCCAGGTATGGCTTACAC 252 | |||||| ||| || |||| ||||| | |||||| ||||||| ||||||||||||||| Sbjct 175 AAAGAAGAATTT-CTAGGGCGTCGTC-ATAGGCTTTCTCAAGTTCAGGTATGGCTTACAA 232 Query 253 GTATCCTAACCATCGA-AAACCA-ATTCAATGATCTT-CTTAGCACTTGTA-ACGCTGAG 308 | || | | ||||| ||| | ||||||||| || |||| | | | | | |||| Sbjct 233 ATGTCGTGATTATCGAGAAA--AGGTTCAATGAT-TTGTTTAGTA-ATAAAGAGGTTGAG 288 Query 309 ATTCAAAGGTTGTGTCTCTGTGGTTTTTGCTCTAAAA-ATATGAAAATGAGCTATCTTTA 367 || | ||||||||| | ||||| |||||||| |||| | || ||| |||||||| ||| Sbjct 289 ATAGAGAGGTTGTGTTTTTGTGGGTTTTGCTCCAAAAGTTTTGGAAA-GAGCTATCATTA 347 Query 368 TGGGAAAA-GAGTTATTGTGTTGTTGAGGGAGGTTGAGGGTCTCAGC-TCTCAAGGAGAA 425 |||||||| | |||| ||| |||||| ||| |||||| |||| | |||| |||| | Sbjct 348 TGGGAAAATG-GTTAGCGTGATGTTGAAGGAAGTTGAGAATCTC-TCTTCTCGTGGAGTA 405 Query 426 TTTGATGTGGTGACTGAGGCAACTCCGATAGCTGAGGTTGAAGAGTTGCCTATTCAATCC 485 ||||||||||||||||||| || || | ||||| | ||||| ||| |||||||||||||| Sbjct 406 TTTGATGTGGTGACTGAGGAAAATCTGGTAGCTCAAGTTGAGGAGATGCCTATTCAATCC 465 Query 486 ACAATTGTTGGTCAGGATTCGATGCTCGACAA-GGTATGGAACTGTCTAATGGAAGATAA 544 ||| |||||||||| || | ||||| || || ||| |||||| ||| ||| ||||| Sbjct 466 ACAGTTGTTGGTCAAGAGACAATGCTTGA-AAGGGTTTGGAACACTCTCATGAAAGATGG 524 Query 545 AGTCGGGATTGTGGGTCTGTATGGTATGGGTGGAGTAGGAAAAACCACCCTTCTCACGCA 604 | || ||| ||||| | ||||| ||||||||||| ||||||||||| ||||| ||||| Sbjct 525 ATTCAAGATCATGGGTTTATATGGAATGGGTGGAGTGGGAAAAACCACGCTTCTTACGCA 584 Query 605 GATCAACAATAAGTTTTCT-AAACTAGGTGGTGGATTTGATGTCGTGATATGGGTTGTGG 663 |||||||| ||||||||| |||| || ||||||||||||| | ||||| |||||||| | Sbjct 585 AATCAACAAGAAGTTTTCTGAAAC-AGATGGTGGATTTGATATTGTGATGTGGGTTGTTG 643 Query 664 TGTCTAAAA-ATGCAACAGTA-C-ATAAGATTCAAAGAAG-CATCGGGGAAAA-ACTAGG 718 ||||||||| | | | || | | ||| ||||| |||||| ||| | |||| |||||| Sbjct 644 TGTCTAAAACCT-C-AGAG-ATCTATAGGATTC-AAGAAGACAT-TGCAAAAAGACTAGG 698 Query 719 CCTTGTTGGG-AAGAAGTGGGACGAGAAAAACAAAAACCAGAGAGCCCTTGACATCCACA 777 ||| ||| || |||||||| | |||||| ||||| |||||||| ||||||| |||| Sbjct 699 TCTT-ACGGGCGAGGAGTGGGACAAAAAAAACGAAAACAAGAGAGCCGTTGACATACACA 757 Query 778 ACGTTCTTAGGAGGA-AGAAGTTTGTCTTGTTGTTGGATGATATATGGGAAAAAGTGAAC 836 | || ||||||| || | || ||||| || |||||||||||||||||||| ||||||||| Sbjct 758 ATGTCCTTAGGA-GACATAAATTTGTGTTATTGTTGGATGATATATGGGAGAAAGTGAAC 816 Query 837 TTA-AATGTGATTGGAGTCCCGTATCCGAGTGGAGAAAACGGATGCAAAGTAGCATTCAC 895 ||| ||| || ||||||| |||||||| ||| ||||||| ||| ||| ||||||||| || Sbjct 817 TTAGAAT-TGGTTGGAGTACCGTATCCAAGTAGAGAAAATGGAAGCATAGTAGCATTTAC 875 Query 896 CACTCGTTCTAAG-GAAGTTTGTGGACGCATGGGGGTAGATGACCCGATGGAAGTCAGTT 954 ||| |||||| | || |||||||| || ||||| || |||||||||||| |||| |||| Sbjct 876 CACCCGTTCT-CGAGATGTTTGTGGGCGTATGGGAGTCGATGACCCGATGCAAGTTAGTT 934 Query 955 GTTTAGACACCAGAA-ACGCCTGGGATTTGTTGAAAAAGAAAGTGGGGGAAAACACATTA 1013 |||| || ||| ||| | || ||||||||||| |||| ||||| || |||||||| || Sbjct 935 GTTTGGA-ACCTGAAGATGCTTGGGATTTGTTTCAAAACAAAGTAGGAGAAAACAC-TTT 992 Query 1014 G-GAAGCCACCCAGACATTCCCCAGCTTGC-ACGCAAAGTTTCGGAAAAATGTCGTGGTC 1071 | |||||| || || ||||| | ||||| | | |||| | |||||||||||||||| Sbjct 993 GAAAAGCCATCCGGATATTCCTGAACTTGCAAAAC-AAGTCGCTGAAAAATGTCGTGGTC 1051 Query 1072 TACCACTAGCACTGAATGTTC-TTGGTGAGACCATGTCATGCAAGAGGACAATACAAGAA 1130 ||||| ||||||| |||| || |||| || || ||| ||||||| || ||| | |||||| Sbjct 1052 TACCATTAGCACTTAATG-TCATTGGAGAAACTATGGCATGCAAAAGCACAGTTCAAGAA 1110 Query 1131 TGGTGTCATGCAATTGAGGTTTTGACTTCATCTGCTACAGATTTTTCAGGAATGGAAGAT 1190 ||| |||| || ||||| |||||||||||||| || | ||| |||||||| |||||||| Sbjct 1111 TGGCGTCACGCGATTGATGTTTTGACTTCATCAGCCATAGAGTTTTCAGGCATGGAAGAC 1170 Query 1191 GAGGTTCTTCCA-ATTTTAAAATATAGCTATGATAGCTTGA-ATGGGGAGGAT-GCAAAG 1247 || ||||| || || || || ||||||||||||| || | | ||||| || |||| Sbjct 1171 GAAATTCTT-CAGATATTGAAGTATAGCTATGATA-ATTTACAAAGGGAGCATATCAAA- 1227 Query 1248 TCGTGTTTCCTATATTGCTCTCTATTTCCTGAAGATT-TTAAAATCAGAAAAGA-GATGT 1305 || |||||||||||||||||| ||||||||||||||| | | | | || ||||| || | Sbjct 1228 TCATGTTTCCTATATTGCTCTTTATTTCCTGAAGATTATGAGATTAAG-AAAGAGGA-G- 1284 Query 1306 TTA-TTGAATACTGGATTTGTGAGGGATTCATAGAAG-AAAAGCAAGGTAGAGAAAAAGC 1363 ||| | || || ||||| ||||| ||||||||||| | ||||| | |||| ||| | ||| Sbjct 1285 TTAGTAGACTATTGGATATGTGAAGGATTCATAGATGCAAAAG-ATGGTAAAGAGAGAGC 1343 Query 1364 -ATTCAACCAAGGTTATGATATAC-TCGGTACTCTTGTCCGTTCAT-CTTTATTGTTGGA 1420 | | ||| |||| ||||| || | ||||||||||||||||| ||| ||||||| |||| Sbjct 1344 GA-TAAACGAAGGCTATGAGAT-CATCGGTACTCTTGTCCGTACATGTTTTATTGATGGA 1401 Query 1421 -G--G-AT---A-AAGA-TTTTGTGAGTATGCATGATGTGGTTCGTGAGATGGCTCTGTG 1471 | | || | || | |||| |||||||| |||||||||||||||||||| || Sbjct 1402 GGAAGAATGGAAGAAAACGGAAGTGAAAATGCATGACGTGGTTCGTGAGATGGCTCTATG 1461 Query 1472 GATATCATCTGATCTTGGAAAGCATAAAGAGCGATGTATTGTGCAAGCCGGTGTTGGATT 1531 |||||||||||||||||||||||||||||| | ||| ||||||| |||||||||||| || Sbjct 1462 GATATCATCTGATCTTGGAAAGCATAAAGATCAATGCATTGTGCGAGCCGGTGTTGGGTT 1521 Query 1532 AGATGAACTACCTGAAGTCAAGAATTGGAGAGCTGTGAAAAGGATGTCGCTAATGAATAA 1591 | ||| | |||| ||||| ||||| ||||||||||||| ||| |||||| | ||||| || Sbjct 1522 ACATGCAGTACCGGAAGTGAAGAACTGGAGAGCTGTGAGAAGAATGTCGTTGATGAAAAA 1581 Query 1592 TAATTTTGAAAACATATATGGCT-GTCCCGA-ATG-CGTTGAACTTATAACTCTGTTCCT 1648 | | ||||||| || | ||| | | ||| | ||| | | |||||| |||||| |||| Sbjct 1582 TGAGCTTGAAAAGATTT-TGGGTTG-CCCTACATGTCCTC-AACTTACAACTCTCCTCCT 1638 Query 1649 TCAGAATAACTACAAGTTGGTAG-TCATCTCAATG-GAATTCTTTCGGTGT-ATGCCTAG 1705 || || ||| |||| |||||| | || || | ||||||||||| | | ||||||| Sbjct 1639 CCAAAAAAACCACAAATTGGTAAAT-ATTTCCG-GAGAATTCTTTCGAT-TCATGCCTAA 1695 Query 1706 TCTAA-CTGTTTTGGATCTATCA-GAAAATCAC-AGTCTTAGTGAACTGCCAGAAGAAA- 1761 || | || |||||| ||||| | || | | ||||| | || | | ||| |||||| Sbjct 1696 CCTTGTC-GTATTGGATTTATCATGGAA-T-AGTAGTCTCACTGGATTACCA-AAGAAAA 1751 Query 1762 TATCAGAGTTGGTGTCCTTGC-AGTATCTTGATTTGTCCGGG-ACATATATAGAGCGACT 1819 |||||||||| || ||||||| | |||||||| ||||| | ||| | || || | | Sbjct 1752 TATCAGAGTTAGTCTCCTTGCGA-TATCTTGACTTGTC-GTATACAAACATCGAAAGGTT 1809 Query 1820 ACCTCATGGTTTACAAAAGTTGAGA-AAGTTAGTACATCTGAAACTGGAAAGGACGAGGA 1878 ||| |||||||||| |||||| | || | | |||||||||| |||| | || || Sbjct 1810 GCCTGTTGGTTTACAAGAGTTGAAACAACTAA-TACATCTGAATTTGGAGTCCATGAAGA 1868 Query 1879 GACTTG-AGAGCATTTCAGGGATATCATAT-TTGTCAAGTTTGA-GAACATTAAGACTA- 1934 | ||| |||| || | ||| |||| || |||| ||||||| || || | |||||| Sbjct 1869 GT-TTGGAGAGTATG-CTGGGGTATC-TAAGTTGTTGAGTTTGAAGA-CACTGAGACTAC 1924 Query 1935 AGAGATTC-AAAAACGACACTAGA-GACGAGCCTAAT-GAAAGAACTACAGCTCTTAGAA 1991 | | | || ||||| | | ||||| | || | | | ||| || ||||| ||||||||| Sbjct 1925 AAA-AGTCCAAAAAGG-CTCTAGATGT-GAAC-TCAGCGAAGGAGCTACAACTCTTAGAA 1980 Query 1992 CATTTAGAACT-CATAACCACAAATATCTCCTCAAGTTTGGTTGGGGAA--TTGGTATAT 2048 ||| ||||| | | |||||| | |||||| |||||||||||| |||| || || ||| Sbjct 1981 CATATAGAAGTTC-TAACCATAGATATCTTTTCAAGTTTGGTTTTGGAACATTTGT-TAT 2038 Query 2049 TATCCCAGAG-TAGG-GAGATGTATTCAA 2075 || ||||| | || || || ||||||| Sbjct 2039 GCTCTCAGAGATTGGCGAAATCTATTCAA 2067 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 133694903095 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5