BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg920084
Length=2691
Score E
Sequences producing significant alignments: (Bits) Value
AT1G12460.1 | Symbols: | Leucine-rich repeat protein kinase fa... 4076 0.0
AT1G62950.1 | Symbols: | leucine-rich repeat transmembrane pro... 2047 0.0
> AT1G12460.1 | Symbols: | Leucine-rich repeat protein kinase
family protein | chr1:4247249-4250630 FORWARD LENGTH=3289
Length=3289
Score = 4076 bits (2207), Expect = 0.0
Identities = 2532/2692 (94%), Gaps = 9/2692 (0%)
Strand=Plus/Plus
Query 2 GGATCCGTTTATGAGCTGAATATGAGAAAGATTCATCTTTTTCTTGTTTTGGTAAATTTC 61
|||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||
Sbjct 434 GGATCCGTTTATGAGCTGAATATGAGAAAGGTTCATCTTTTTCTGGTTTTGGTTCATTTC 493
Query 62 ATCTACATTTCATCTTCTCTCTCCCAGACAATCAATGAGCGAGACATTTTGCTTCAGTTC 121
|||||||||||| |||||| ||| | | |||| ||| ||||||||| |||||||||||
Sbjct 494 ATCTACATTTCAACTTCTCGCTCTGATTCCATCAGTGAACGAGACATTCTGCTTCAGTTC 553
Query 122 AAAGACAGTATCAGTGACGATCCGTACAACAGTTTGGCTTCTTGGGTCTCCGACGGTGAC 181
|||| |||||||||||||||||| |||||||| |||||||||||||| ||||| ||||||
Sbjct 554 AAAGGCAGTATCAGTGACGATCCATACAACAGCTTGGCTTCTTGGGTTTCCGATGGTGAC 613
Query 182 CTCTGCAATAGCTTCAATGGAGTCACTTGTAACCCACAAGGTTTCGTGGACAAAATCGTT 241
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 614 CTCTGCAATAGCTTCAATGGAATCACTTGTAACCCACAAGGTTTCGTGGACAAAATCGTT 673
Query 242 CTTTGGAACACCAGTCTCGCCGGAACCCTAGCTCCGGGATTGTCAAATCTAAAGTTTGTT 301
|| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 674 CTGTGGAACACAAGTCTCGCCGGAACCTTAGCTCCGGGATTGTCAAATCTAAAGTTTATT 733
Query 302 CGAGTTCTGACCTTGTTTGGCAACAGGTTTACAGGTAATTTACCGTTGGATTAC-TCAAA 360
|||||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct 734 CGAGTTCTGAACTTGTTTGGCAACAGGTTTACAGGTAATTTACCGTTGGATTACTTC-AA 792
Query 361 GTTGCAAACTTTGTGGACGATTAATGTTAGTTCCAATGCGTTGTCTGGTACGATCCCGGA 420
||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct 793 GTTGCAAACTTTGTGGACGATTAATGTTAGTTCCAATGCGTTGTCTGGTCCGATTCCGGA 852
Query 421 GTTTATCGGTGAATTGTCTAGCTTAAGGTTTCTTGACTTGTCTAAAAATGGTTTCACCGG 480
|||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 853 GTTTATTAGTGAATTGTCTAGCTTAAGGTTTCTAGACTTGTCTAAAAATGGTTTCACCGG 912
Query 481 AGAGATTCCGGTTTCTCTGTTTAAGTTCTGTGAGAAGACCAAATTTGTTTCACTGTCTCA 540
||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct 913 AGAGATTCCGGTTTCTCTGTTTAAGTTCTGTGACAAGACCAAATTTGTTTCACTGGCTCA 972
Query 541 TAACAATCTCTCTGGATCAATCCCTGGTACGATCGTGAACTGTAACAACCTCGTAGGATT 600
||||||| ||| |||||||||||||| | | || || |||||||||||||||||||||||
Sbjct 973 TAACAATATCTTTGGATCAATCCCTGCTTCAATTGTAAACTGTAACAACCTCGTAGGATT 1032
Query 601 TGATTTCTCTTATAATAATCTGAAGGGAGTGTTACCGCCTAGGATTTGTGATATTCCGGT 660
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct 1033 TGATTTCTCTTACAATAATCTGAAGGGAGTGTTGCCGCCTAGGATTTGTGATATTCCTGT 1092
Query 661 GCTTGAGTATATCTTAGTGAGAAACAATTTGTTGTCTGGTGATGTCTTTGACGAGATAAA 720
|||||| ||||||| |||||||||||||||||||||||||||||||| ||| |||||| |
Sbjct 1093 GCTTGAATATATCTCAGTGAGAAACAATTTGTTGTCTGGTGATGTCTCTGAGGAGATACA 1152
Query 721 GAAATGTCAGAGGTTGATTCTTGTCGATTTCGGAAGCAATTTGTTTCATGGATTAGCGCC 780
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct 1153 GAAATGTCAGAGGTTGATTCTTGTTGATTTAGGAAGCAATTTGTTTCATGGATTAGCGCC 1212
Query 781 TTTTGAGGTCCTTACGTTCAAGAACATAACTTACTTCAATGTCTCTTGGAACCGGTTTGG 840
||||| ||| ||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 1213 TTTTGCGGTTCTTACGTTCAAGAACATAACTTATTTCAATGTCTCTTGGAACCGATTTGG 1272
Query 841 TGGGGAGATTGGAGAGATAGTTGATTGCAGTGAAAGTTTGGAGTTTTTGGATGCTTCGTC 900
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1273 TGGTGAGATTGGAGAGATAGTTGATTGCAGTGAAAGTTTGGAGTTTTTGGATGCTTCGTC 1332
Query 901 GAATGAGTTAACTGGTAGGATCCCAAATGGTGTTGTGGGTTGCAAAAGTCTCAAGCTTTT 960
|||||||||||| |||||||| || | ||||||| |||||||||||||||||||||||||
Sbjct 1333 GAATGAGTTAACCGGTAGGATTCCTACTGGTGTTATGGGTTGCAAAAGTCTCAAGCTTTT 1392
Query 961 GGATTTGGAGTCTAACAAGCTGAATGGTAGTATCCCTGGAGGTATCGAGAAGATGGAGAC 1020
||||||||||||||||||||||||||| |||||||| ||| |||| | |||||||||||
Sbjct 1393 GGATTTGGAGTCTAACAAGCTGAATGGAAGTATCCCGGGAAGTATTGGGAAGATGGAGA- 1451
Query 1021 G-CTCTCGGTGATCAGATTAGGCAATAATTCTATAGATGGGGAGATACCAAGAGAGATTG 1079
| ||||| |||||||||||||| ||||||||||||||||||| |||||||||||| ||||
Sbjct 1452 GCCTCTCAGTGATCAGATTAGGGAATAATTCTATAGATGGGGTGATACCAAGAGATATTG 1511
Query 1080 GAAGTTTGGAGTTTCTACAAGTTTTGAATCTGCATAACCTCAATCTCATTGGTGAAGTTC 1139
||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 1512 GAAGTTTGGAGTTTCTACAGGTTTTGAATCTGCATAATCTCAATCTCATTGGTGAAGTTC 1571
Query 1140 CAGAGGATATATCTAATTGCAGAGTACTTCTTGAACTAGATGTTTCAGGTAATAATTTAG 1199
||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct 1572 CAGAGGATATATCCAATTGCAGAGTACTTCTTGAACTAGATGTTTCAGGGAATGATTTAG 1631
Query 1200 AAGGAGAGGTCCCTAAGAAGCTATTAAACTTAACAAACTTAGAGATTCTTGATCTGCATC 1259
||||| || || |||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 1632 AAGGAAAGATCTCTAAGAAGCTATTAAACTTAACAAACATAAAGATTCTTGATCTGCATC 1691
Query 1260 GAAACCGTCTCAATGGAAGTATTCCACCTGAACTTGGAAACCTCTCCAGAA-TCCAGTTT 1318
|||||||||| || |||||||| ||||||||||||||||||||||||| || ||||||||
Sbjct 1692 GAAACCGTCTGAACGGAAGTATCCCACCTGAACTTGGAAACCTCTCCA-AAGTCCAGTTT 1750
Query 1319 CTTGATCTTTCACAGAATTCACTTTCAGGTTCAATCCCGTCTTCCCTCGAGAATTTGCAT 1378
|||||||||||||||||||| |||||||| |||||||||||||||||| || |||| ||
Sbjct 1751 CTTGATCTTTCACAGAATTCGCTTTCAGGGCCAATCCCGTCTTCCCTCGGGAGTTTGAAT 1810
Query 1379 GCACTAACACATTTCAATGTCTCCTACAACAATCTCTCCGGTATTATCCCTCCTGTTCCA 1438
| ||||| ||||||||||||||||| ||||||||||| ||| |||||||||||||||||
Sbjct 1811 ACTCTAACGCATTTCAATGTCTCCTATAACAATCTCTCTGGTGTTATCCCTCCTGTTCCA 1870
Query 1439 GTGATACAAGCTTTCGGATCTTCTGCGTTTTCAAACAACCCTTTCCTTTGCGGTGATCCT 1498
||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 1871 ATGATACAAGCTTTTGGATCTTCTGCATTTTCGAACAACCCTTTCCTTTGCGGTGATCCT 1930
Query 1499 CTTGTAACTCCCTGCAATTCTCGTGGGGCTGCAGCAAAATCCAGAAATTCTAATGCTCTA 1558
|||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||
Sbjct 1931 CTTGTAACTCCCTGCAATTCACGTGGAGCTGCAGCAAAATCCAGAAATTCTGATGCTCTA 1990
Query 1559 AGCATTTCGGTTATCATTGTTATTATTGCGGCTGCTATTATCCTCTTTGGTGTCTGTATA 1618
||||||||||||||||| |||||||||||||||||| | ||||||||||||||||| ||
Sbjct 1991 AGCATTTCGGTTATCATCGTTATTATTGCGGCTGCTGTCATCCTCTTTGGTGTCTGCATT 2050
Query 1619 GTGCTTGCTTTGAACCTAAGAGCTCGTAAAAGGAGAAAAGATGAGGAAATACTTACAGTG 1678
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2051 GTGCTTGCTTTGAACCTAAGAGCTCGTAAAAGGAGAAAAGATGAAGAAATACTTACAGTT 2110
Query 1679 GAAACCACTCCTCTGGCGTCTTCAATTGACTCTAGCGGTGTGATAATCGGAAAGCTTGTT 1738
||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct 2111 GAAACCACTCCACTGGCGTCTTCGATTGACTCTAGCGGTGTGATAATTGGAAAGCTTGTT 2170
Query 1739 CTTTTCAGCAAGAATTTGCCATCAAAATATGAAGATTGGGAGGCGGGTACAAAAGCTTTA 1798
|||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||
Sbjct 2171 CTTTTCAGCAAGAATTTGCCTTCAAAGTATGAAGATTGGGAGGCAGGTACAAAAGCTTTG 2230
Query 1799 CTCGACAAAGAAAATATAATTGGCATGGGGTCGATTGGATCAGTCTATAGAGCATCTTTC 1858
|||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct 2231 CTCGACAAGGAAAATATAATCGGCATGGGATCGATTGGATCAGTCTATAGAGCATCTTTC 2290
Query 1859 GAAGGAGGGGTTTCCATTGCAGTGAAGAAGCTTGAGACTTTGGGAAGAATCAGAAACCAA 1918
|||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 2291 GAAGGAGGAGTTTCCATTGCAGTGAAGAAGCTTGAGACCTTAGGAAGAATCAGAAACCAA 2350
Query 1919 GAAGAGTTTGAGCAAGAAATCGGACGGCTTGGAGGTTTGCAACATCCGAATCTGTCTTCT 1978
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2351 GAAGAGTTTGAGCAAGAAATTGGACGGCTTGGAGGTTTGCAACATCCGAATCTGTCTTCT 2410
Query 1979 TTCCAAGGTTACTACTTTTCCTCAACAATGCAGTTGATTTTCTCTGAATTTGTCCCTAAC 2038
||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct 2411 TTCCAAGGTTACTACTTTTCCTCAACAATGCAGTTGATTCTCTCTGAGTTTGTCCCTAAT 2470
Query 2039 GGTAGCCTCTACGATAATCTACACTTAAGAATTTACCCTGGAACCAGCTCAAGCCATGGG 2098
|||||||||||||||||||||||| ||||||||| ||| ||||||||||||||| |||||
Sbjct 2471 GGTAGCCTCTACGATAATCTACACCTAAGAATTTTCCCGGGAACCAGCTCAAGCTATGGG 2530
Query 2099 AATACCGATTTGAATTGGCACAGAAGATTTCAGATTGCTTTAGGAACCGCGAAAGCGCTC 2158
||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 2531 AATACTGATTTGAATTGGCACAGAAGATTTCAGATTGCTTTAGGAACTGCAAAAGCGCTC 2590
Query 2159 TCTTTCCTACACAATGACTGTAAACCGGCAATTCTTCATCTCAATGTTAAGTCCACCAAC 2218
|||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2591 TCTTTCCTTCACAATGACTGTAAACCGGCGATTCTTCATCTCAATGTTAAGTCCACCAAC 2650
Query 2219 ATTCTTCTAGACGAAAGATATGAGGCAAAGCTATCGGATTATGGGTTAGAAAAGTTTCTT 2278
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct 2651 ATTCTTCTAGACGAAAGGTACGAGGCAAAGCTATCGGATTATGGGTTAGAAAAGTTTCTT 2710
Query 2279 CCGGTTATGGACAGCTTCGGTTTGACCAAGAAGTTCCACAACGCGGTTGGGTACATTGCT 2338
||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct 2711 CCGGTTATGGACAGCTTTGGTTTGACTAAGAAGTTCCACAACGCGGTTGGGTACATTGCT 2770
Query 2339 CCAGAGCTAGCTCAGCAGAGTTTGAGAGTGAGTGAGAAATGCGACGTGTATAGTTATGGT 2398
|||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||| |||
Sbjct 2771 CCAGAGTTAGCTCAGCAGAGTTTGAGAGCGAGTGAGAAATGCGATGTGTATAGTTACGGT 2830
Query 2399 GTAGTTCTTCTTGAGCTGGTTACAGGTAGAAAACCGGTGGAGTCTCCATCGAGAAA-CCA 2457
|| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct 2831 GTGGTTCTTCTTGAGCTGGTTACAGGTAGAAAACCGGTGGAGTCTCCATCG-GAAAACCA 2889
Query 2458 AGTCTTGATCTTGAGAGATTATGTGAGGGATTTGTTGGAAACTGGTTCGGCTTCTGATTG 2517
|||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||
Sbjct 2890 AGTCTTGATCTTGAGAGACTATGTGAGGGATTTGTTGGAGACTGGTTCAGCTTCTGATTG 2949
Query 2518 TTTTGACAGAAGGTTGAGAGAGTTTGAAGAGAACGAGCTGATTCAAGTCATGAAGTTAGG 2577
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2950 TTTTGACAGAAGGTTGAGAGAGTTTGAAGAGAATGAGCTGATTCAAGTCATGAAGTTAGG 3009
Query 2578 ACTCCTTTGTACGTCAGAGAATCCACTGAAGAGACCGAGTATGGCTGCGGTTGTGCAGGT 2637
||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct 3010 ACTCCTTTGTACGTCCGAGAATCCACTGAAGAGACCGAGCATGGCTGAGGTTGTGCAGGT 3069
Query 2638 TCTTGAATCAATTAGAAATGGATTTGGATCATGATAAAGCTTTTTCC-TTTT 2688
|||||||||||| |||||||||||||||||||||| ||||||||||| ||||
Sbjct 3070 TCTTGAATCAATCAGAAATGGATTTGGATCATGATGAAGCTTTTTCCCTTTT 3121
> AT1G62950.1 | Symbols: | leucine-rich repeat transmembrane protein
kinase family protein | chr1:23315294-23318234 FORWARD
LENGTH=2846
Length=2846
Score = 2047 bits (1108), Expect = 0.0
Identities = 2148/2638 (81%), Gaps = 119/2638 (5%)
Strand=Plus/Plus
Query 101 CGAGACATTTTGCTTCAGTTCAAAGACAGTATCAGTGACGATCCGTACAACAGTTTGGCT 160
||||| ||| | ||||| |||||||||| |||| || ||||||||||||||||| |||
Sbjct 97 CGAGAGATTCTACTTCAATTCAAAGACAACATCAACGATGATCCGTACAACAGTTTAGCT 156
Query 161 TCTTGGGTCTCCGACGGTGACCTCTGCAATAGCTTCAATGGAGTCA-CTTGTAACCCACA 219
||||||||||| | | ||||||||| || ||||||||||| || | ||||||||| | |
Sbjct 157 TCTTGGGTCTCTAATGCTGACCTCTGTAACAGCTTCAATGGTGT-ATCTTGTAACCAAGA 215
Query 220 AGGTTTCGTGGACAAA-ATCGTTCTTTGGAACACCAGTCTCGCCGGAACCCTAGCTCCGG 278
||| ||||| || ||| ||||||||||||||||| |||||||||||||||||| | ||||
Sbjct 216 AGGATTCGTCGA-AAAGATCGTTCTTTGGAACACTAGTCTCGCCGGAACCCTAACGCCGG 274
Query 279 GATTGTCAAATCTAAAGTT-TGTT-CGAGTTCTGACCT-TGTTTGGCAACAGGTTTACAG 335
|||||| | | || || | || | ||| ||| || |||||||||||||| ||||||
Sbjct 275 CATTGTCTGGT-TTAACTTCT-TTAAGGGTTTTGA-CTCTGTTTGGCAACAGGATTACAG 331
Query 336 GTAATTTACCGTTGGATTACTCAAAGTTGCAAACTTTGTGGACGATTAATGTTAGTTCCA 395
|||||||||| |||||||||| |||||| || ||||| |||| ||| |||||||||||||
Sbjct 332 GTAATTTACCTTTGGATTACTTAAAGTTACAGACTTTATGGAAGATCAATGTTAGTTCCA 391
Query 396 ATGCGTTGTCTGGTACGATCCCGGAGTTTATCGGTGAATTGTCTAGCTTAAGGTTTCTT- 454
|||| ||||||||| | | || || ||||||||||| ||| ||| |||||| |||||
Sbjct 392 ATGCATTGTCTGGTTTGGTTCCTGAATTTATCGGTGATTTGCCTAATTTAAGG-TTCTTG 450
Query 455 GACTTGTCTAAAAATG-GTTTCACCGGAGAGATTCCGGTTTCTCTGTTTAAGTTCTGTGA 513
|| ||||| ||||||| | ||| ||||||||||| |||||||||||| |||||| |
Sbjct 451 GATTTGTCGAAAAATGCG-TTCTTTGGAGAGATTCCAAATTCTCTGTTTAAATTCTGTTA 509
Query 514 GAAGACCAAA-TTTGTTTCACTGTCTCATAACAATCTCTCTGGATCAATCCCTGGTA-CG 571
|||| |||| ||||||||| ||||||||||||||||||| |||||||||||| | | |
Sbjct 510 CAAGA-CAAAGTTTGTTTCATTGTCTCATAACAATCTCTCAGGATCAATCCCT-GAATCA 567
Query 572 ATCGTGAACTGTAACAACCTCGTAGGATTT-GATTTCTCTTATAATAATC-TGAAGGGAG 629
||||| ||||||||||| ||| | || ||| ||||||||||| ||| | | | ||
Sbjct 568 ATCGTAAACTGTAACAATCTCATTGG-TTTCGATTTCTCTTACAAT-GGCATTACCGGTT 625
Query 630 TGTTACCGCCTAGGATTTGTGATATTCCGGTGCTTGAG--TATATCTTAGTGAGAA-ACA 686
|||| |||| |||| || ||||||||||| |||||| | |||| | || |||| | |
Sbjct 626 TGTT---GCCTCGGATCTGCGATATTCCGGTTCTTGAGTTTGTATC-T-GTTAGAAGA-A 679
Query 687 ATTTGTTGTCTGGTGATGTCTTTGACGAGATAAAGAAATGTCAGAGGTTGATTCTTGTCG 746
||||||||||||||||||| ||||| |||||| ||| ||| |||| |||| || |||||
Sbjct 680 ATTTGTTGTCTGGTGATGTGTTTGAGGAGATATCGAAGTGTAAGAGATTGAGTCATGTCG 739
Query 747 ATTTCGGAAGCAATTTGTTTC-ATGGATTAGCGCCTTTTGAGGTCCTTACG-TTCAAGAA 804
|| | |||||||| || |||| ||||| ||||| |||| ||||| || | ||||||||
Sbjct 740 ATATAGGAAGCAA-TTCTTTCGATGGAGTAGCGTCTTTCGAGGTTATT-GGATTCAAGAA 797
Query 805 CATAACTTACTTCAATGTCTCTTGG-AACCGGTTTGGTGGGGAGATTGGAGAGATAGTTG 863
| | ||||| || ||||| || ||| ||||||||| | ||||||||||| ||||| ||||
Sbjct 798 CCTGACTTATTTTAATGTGTC-TGGAAACCGGTTTAGAGGGGAGATTGGTGAGATTGTTG 856
Query 864 ATTGCAGTGAAAGTTTGGAGTTTTTGGATGCTTCGTCGAATGAGTTAACTGGT-AGGATC 922
|||| ||||||||||||||||||||||||||||| |||||||||||||||||| | | |
Sbjct 857 ATTGTAGTGAAAGTTTGGAGTTTTTGGATGCTTCTTCGAATGAGTTAACTGGTAATG-TA 915
Query 923 CCAAATGGTGTTGTGGGTTGCAAAAGTCTCAAGCTTTTGGATTTGGAGTCTAACAAGCTG 982
|| | ||| | || ||||||||||| ||||||||||| ||||| || || | |||
Sbjct 916 CCTAGCGGTATAACCGGATGCAAAAGTCTTAAGCTTTTGGACTTGGAATCGAATAGGCTC 975
Query 983 AATGGTAGTATCCCTGGAGGTATCGAGAAGATGGAGACGCTCTCGGTGATCAGATTAGGC 1042
||||| ||| | |||| |||||| | ||||||||||| |||||| |||||||| ||||||
Sbjct 976 AATGGGAGTGTACCTGTAGGTATGGGGAAGATGGAGAAGCTCTCTGTGATCAGGTTAGGC 1035
Query 1043 AATAA-TTCTATAGATGGGGAGATACCAAGAGAGATTGGAAGT-TTGGAGTTTCTACAAG 1100
|||| || |||||||||| || ||||| ||| | |||| | || |||| |||||| |
Sbjct 1036 GATAACTT-TATAGATGGGAAGCTACCACTTGAGCTCGGAAATCTT-GAGTATCTACAGG 1093
Query 1101 TTTTGAATCTGCATAACCTCAATCTCATTGGTGAAGTTCCAGAGGATATATCTAATTGCA 1160
|||||||| ||||||| ||||||||| |||||||| | ||||||||| |||| || ||||
Sbjct 1094 TTTTGAATTTGCATAATCTCAATCTCGTTGGTGAAATACCAGAGGATTTATCAAACTGCA 1153
Query 1161 GAGTACTTCTTGAACTAGATGTTTCAGGTAATAATTTAGAAGGAGAGGTCCCTAAGAAGC 1220
|| |||||||||||||||||||||| || ||| ||| ||||||||| |||||||||| |
Sbjct 1154 GACTACTTCTTGAACTAGATGTTTCTGGAAATGGTTTGGAAGGAGAGATCCCTAAGAATC 1213
Query 1221 TATTAAACTTAACAAACTTAGAGATTCTTGATCTGCATCGAAACCGTCTCAATGGAAGTA 1280
|||| ||||||||||||||||||||||||||||||||||| ||||| ||| ||||| |
Sbjct 1214 TATTGAACTTAACAAACTTAGAGATTCTTGATCTGCATCGGAACCGAATCAGTGGAAACA 1273
Query 1281 TTCCACCTGAA-CTTGGAAACCTCTCCAGAATCCAGTTTCTTGATCTTTCACAGAATTCA 1339
|||| ||| || || || | |||||| ||||||||||| || ||||||||| ||||||
Sbjct 1274 TTCCGCCT-AATCTCGGGAGCCTCTCGAGAATCCAGTTCCTCGATCTTTCAGAGAATTTG 1332
Query 1340 CTTTCAGGTTCAATCCCGTCTTCCCTCGAGAATTTG-CATGCACTAACACATTTCAATGT 1398
||||| ||| | |||||||||||||||||||||||| | | ||| || |||||||||||
Sbjct 1333 CTTTCTGGTCCTATCCCGTCTTCCCTCGAGAATTTGAAAAG-ACTGACTCATTTCAATGT 1391
Query 1399 CTCCTACAACAATCTCTCCGGTATTATCCCTCCTGTTCCAGTGATACAAGCTTTC-GGAT 1457
|| |||||||| |||||||| |||| | | ||| ||| ||||| ||| |||
Sbjct 1392 TTCTTACAACAACCTCTCCGGCATTA----T-C----CCAAAGATTCAAGC-TTCGGGAG 1441
Query 1458 CTTCTGCGTTTTCAAACAACCCTTTCCTTTGCGGTGATCCTCTTGTAACTCCCTGCAATT 1517
||||| ||||||| |||||||||||||| |||||||||||||||| ||| || ||||||
Sbjct 1442 CTTCTTCGTTTTCCAACAACCCTTTCCTCTGCGGTGATCCTCTTGAAACACCGTGCAATG 1501
Query 1518 CTCGT-GGGGCTGCAGCAAAATCCAGAAATTCTAATGCTCTAAGCATTTCGGTTATCATT 1576
||| | | | | | ||| ||| ||||| | || |||||||||| || |||||||||
Sbjct 1502 CTC-TCAGAACCGGATCAAGATCAAGAAAAACCAAAGCTCTAAGCACCTCTGTTATCATT 1560
Query 1577 GTTATTATTGCGGCTGCTATTATCCTCTTTGGTGTCTGTATAGTGCTTGCT-TTGAACCT 1635
||||| || || |||||| ||| | ||||| ||||| ||||||||| | ||||||||
Sbjct 1561 GTTATCATCGCTGCTGCTGCGATCTTGGTTGGTATCTGTCTAGTGCTTG-TCTTGAACCT 1619
Query 1636 AAGAGCTCGT-AAA-A-GGAGAAAAG-ATG-AG--GAAATACTTACAGTGGA-A--AC-- 1683
||||||||| ||| | ||| ||||| || || |||||| | || | || | ||
Sbjct 1620 TAGAGCTCGTAAAAGACGGA-AAAAGCGTGAAGAAGAAATAGTCACTTTTGATACCACAA 1678
Query 1684 CACTC-CTCTGGCGTCTTC--AAT-TGACT-CTAGCGGTGTGATA-ATCGGAAAGCTTGT 1737
||| | ||| ||| || | ||| || | | | ||||| | | | ||||| |||||
Sbjct 1679 CACCCACTCAGGCTTCAACGGAATCTG-GTAATGGTGGTGTAACATTTGGGAAA-CTTGT 1736
Query 1738 TCTTTTCAGCAAGAATTTGCCATCAAAATATGAAGATTGGGAGGCGGGTACAAAAGCTTT 1797
||| |||||||||| |||||| ||||||||||||||||||||||| ||||| ||||| ||
Sbjct 1737 TCTATTCAGCAAGAGTTTGCCTTCAAAATATGAAGATTGGGAGGCAGGTACGAAAGCATT 1796
Query 1798 ACTCGACAAAGAAAATATAATTGGCATGGGGTCGATTGGATCAGTCTATAGAGCATCTTT 1857
|||||||| || || || || || || || || |||||| | || ||||||||||||||
Sbjct 1797 GCTCGACAAGGATAACATTATCGGTATTGGATCAATTGGAGCGGTTTATAGAGCATCTTT 1856
Query 1858 CGAAGGAGGGGTTTCCATTGCAGTGAAGAAGCTTGAGACTTTGGGAAGAATCAGAAACCA 1917
|||||| ||||||||||| |||||||| ||||| |||||| | || ||||||||||||||
Sbjct 1857 CGAAGGCGGGGTTTCCATCGCAGTGAAAAAGCTCGAGACTCTAGGTAGAATCAGAAACCA 1916
Query 1918 AGAAGAGTTTGAGCAAGAAATCGGACGGCTTGGAGGTTTGCAA--CATCCGAATC-TGTC 1974
||||||||||||||||||||| ||| |||||||| |||| || || ||||||| || |
Sbjct 1917 AGAAGAGTTTGAGCAAGAAATAGGAAGGCTTGGAAGTTT--AAGTCACCCGAATCTTG-C 1973
Query 1975 TTCTTTCCAAGGTTACTACTTTTCCTCAACAATGCAGTTGATT-TTCTCTGAATTTGTCC 2033
|||||| |||||||||||||||||||| ||||||||||| ||| || ||||||||||||
Sbjct 1974 TTCTTTTCAAGGTTACTACTTTTCCTCCACAATGCAGTTAATTCTT-TCTGAATTTGTCA 2032
Query 2034 CTAACGGTAGCCTCTACGATAATCTACACTTAAGAATTTACCC-TGGAAC---C---AGC 2086
| ||||| ||| | ||||||||||||||| ||| | | ||| | |||| | |||
Sbjct 2033 CAAACGGAAGCTTGTACGATAATCTACACCCGAGAGTCT-CCCATAGAACTAGCAGTAGC 2091
Query 2087 -TCA--AGCCATGGGAATACCGATTTGAATTGGCACAGAAGATTTCAGATTGCTTTAGGA 2143
|| |||||||| || ||||| || |||||||| ||||||||||| || || |||||
Sbjct 2092 AGCAGCAGCCATGGAAACACCGAGTTAAATTGGCATAGAAGATTTCAAATAGCAGTAGGA 2151
Query 2144 ACCGCGAAA-GCGCTCTCTTTCCTACACAATGACTGTAAACCGGCAATTCTTCATCTCAA 2202
||||| ||| ||||| ||||| || ||||| || |||||||| || ||||||||||||||
Sbjct 2152 ACCGC-AAAGGCGCTTTCTTTTCTTCACAACGATTGTAAACCCGCGATTCTTCATCTCAA 2210
Query 2203 TGTTAAGTCCACCAACATTCTTCTAGACGAAAGATATGAGGCAAAGCTATCGGATTATGG 2262
||| ||||| |||||||| || || || |||||||| |||||||||||||| ||||| ||
Sbjct 2211 TGTAAAGTCTACCAACATACTCCTTGATGAAAGATACGAGGCAAAGCTATCAGATTACGG 2270
Query 2263 GTTAGAAAAGTTTCTTCCGGTTATGGACAGCTTCGGTTTGACCAAGAAGTTCCACAACGC 2322
|| |||||||||||||||||| || |||||| |||||||| | ||||||||||| ||
Sbjct 2271 TTTGGAAAAGTTTCTTCCGGTTTTGAACAGCTCCGGTTTGA-C--TAAGTTCCACAATGC 2327
Query 2323 GGTTGGGTACATTGCTCCAGAGCTAGCTCAGCAGAGTTTGAGAGTGAGTGAGAAATGCGA 2382
|||||| ||||| ||||||||||||||| |||||||||||||||||||| ||||| ||
Sbjct 2328 GGTTGGATACATAGCTCCAGAGCTAGCT---CAGAGTTTGAGAGTGAGTGACAAATGTGA 2384
Query 2383 CGTGTATAGTTATGGTGTAGTTCTTCTTGAGCTGGTTACAGGTAGAAAACCGGTGGAGTC 2442
|| ||||| |||||||| |||||||||||||| ||||||||||||||||| ||||||||
Sbjct 2385 TGTTTATAGCTATGGTGTGGTTCTTCTTGAGCTTGTTACAGGTAGAAAACCAGTGGAGTC 2444
Query 2443 TCCATC-GAGAAACCAAGTCT-TGATCTTGAGAGATTATGTGAGGGATTTGTTGGAAACT 2500
|| || || |||| | || | ||||||| || ||| |||||||| |||||||||| ||
Sbjct 2445 GCCGTCTGA-AAACGAGGT-TGTGATCTTAAGGGATCATGTGAGGAATTTGTTGGAGACA 2502
Query 2501 GGTTCGGCTTCTGATTGTTTTGACAGAAGGTTGAGAGAGTTTGAAGAGAACGAGCTGATT 2560
||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||
Sbjct 2503 GGTTCGGCTTCTGATTGTTTTGACAGAAGATTGAGAGGGTTTGAAGAGAATGAGCTGATT 2562
Query 2561 CAAGTCATGAAGTTAGGACTCCTTTGTACGTCAGAGAATCCACTGAAGAGACCGAGTATG 2620
||||| ||||| ||||| | |||| || ||||||||||| | ||||||||||| ||
Sbjct 2563 CAAGTGATGAAATTAGGTTTGATTTGCACAACAGAGAATCCATTAAAGAGACCGAGCATT 2622
Query 2621 GCTGCGGTTGTGCAGGTTCTTGAA-TCAATTAGAAATGGATTTGGA-TCATGATAAAG 2676
|| | ||||||||||||||||||| | | | ||||||||| | ||| |||||| ||||
Sbjct 2623 GCAGAGGTTGTGCAGGTTCTTGAACTGA-TCAGAAATGGAAT-GGAATCATGA-AAAG 2677
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 133644736152
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5