BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg920096 Length=1091 Score E Sequences producing significant alignments: (Bits) Value AT1G12600.1 | Symbols: | UDP-N-acetylglucosamine (UAA) transpo... 1740 0.0 > AT1G12600.1 | Symbols: | UDP-N-acetylglucosamine (UAA) transporter family | chr1:4286204-4288878 REVERSE LENGTH=1279 Length=1279 Score = 1740 bits (942), Expect = 0.0 Identities = 1037/1083 (96%), Gaps = 6/1083 (1%) Strand=Plus/Plus Query 3 TATT-TTTCTTTCAAGATCATGAAGATTAACAGCGAAGAACAAATGATAAAACTGTTTGG 61 |||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1 TATTCTTTTTTTCAAGATCATGAAGACTAACAGCGAAGAACAAATGATAAAACTGTTTGG 60 Query 62 AATTCCTCTTTCTGATAAACCCAGATGGCAACAATTTCTCATCTGTTCTTCTGGATTT-T 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct 61 AATTCCTCTTTCTGATAAACCCAGATGGCAACAATTTCTCATCTGTTCTTCTGG-TTTCT 119 Query 121 TCTTTGGTTATCTTGTTAATGGCATCTGTGAGGAATATGTGTACAACCGGCTTAAATTCA 180 |||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 120 TCTTTGGTTACCTCGTTAATGGCATCTGCGAGGAATATGTGTACAACCGGCTTAAATTCA 179 Query 181 GTTATGGATGGTATTTCACGTTTGCGCAAGGATTGGTGTACATTG-CTCTCATTTACATA 239 ||||||||||||||||||||||||||||||||||||||||||||| || | |||||||| Sbjct 180 GTTATGGATGGTATTTCACGTTTGCGCAAGGATTGGTGTACATTGCCT-TGATTTACATG 238 Query 240 TATGGCTTCAGGACGAAGCAAATGGTGAATCCATGGAAGACTTACGTGAAACTATCTGGT 299 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 239 TATGGCTTCAGGACGAAGCAAATGGTTAATCCATGGAAGACTTACGTGAAACTATCTGGT 298 Query 300 GTTCTTATGGGTTCTCATGGCCTCACCAAAGGCTCCTTGGCTTATCTCAATTATCCTGCT 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 299 GTTCTTATGGGTTCTCATGGCCTCACCAAAGGCTCCTTGGCTTATCTCAATTATCCTGCT 358 Query 360 CAAATCATGTTCAAATCCACTAAGGTTTTACCGGTTATGGTAATGGGAGCTTTTATACCA 419 ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 359 CAAATCATGTTCAAATCCACTAAGGTTTTGCCGGTTATGGTTATGGGAGCTTTTATACCA 418 Query 420 GGGTTGAGAAGAAAATACCCTGTCCACGAGTACATATCGGCTATGCTACTTGTAATTGGT 479 |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| Sbjct 419 GGGTTGAGAAGAAAATACCCTGTCCACGAGTACATATCTGCTATGTTACTTGTAATTGGT 478 Query 480 CTGATCATATTCACATTAGCTGATGCCCATACCTCCCCAAACTTCAGTATAGTTGGGGTT 539 || ||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct 479 CTCATCTTATTCACATTGGCTGATGCCCATACCTCCCCAAACTTCAGTATAATTGGGGTT 538 Query 540 GTGATGATCTCGGGCGCTCTCATCATGGACGCTTTTCTCGGTAACTTGCAAGAAGCTATC 599 ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct 539 ATGATGATCTCGGGCGCTCTCATCATGGACGCTTTTCTTGGTAACTTACAAGAAGCTATC 598 Query 600 TTCACGATGAATCCTGAGACAACACAAATGGAGATGTTGTTCTGCTCGACGGTAGTTGGC 659 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 599 TTCACGATGAATCCTGAGACAACACAAATGGAGATGTTGTTTTGCTCGACGGTAGTTGGC 658 Query 660 TTACCGTTCTTACTTGCACCAATGTTTCTTACCGGAGAGCTTTTCAGAGCTTGGAATTCA 719 |||||||||||||||||||| ||| ||||||| ||||||||||||| ||||||||||||| Sbjct 659 TTACCGTTCTTACTTGCACCGATGATTCTTACTGGAGAGCTTTTCACAGCTTGGAATTCA 718 Query 720 TGTGCTCAACATCCATATGTGTATGGAGTGTTGGTGTTCGAAGCCATGGCTACATTTATC 779 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 719 TGTGCTCAACATCCATATGTGTATGGAGTGTTGGTGTTCGAAGCCATGGCTACATTTATC 778 Query 780 GGACAAGTCTCCGTTCTATCCCTCATTGCACTCTTTGGCGCAGCCACAACCGCTATGATA 839 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 779 GGACAAGTCTCCGTTCTATCCCTCATTGCACTCTTTGGCGCAGCCACAACCGCTATGATA 838 Query 840 ACGACGGCGAGAAAAGCGGTAACGCTGTTACTGTCCTACTTGATATTCACAAAGCCTTTA 899 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 839 ACGACGGCGAGAAAAGCGGTAACGCTGTTACTGTCCTATTTGATATTCACAAAGCCTTTA 898 Query 900 ACGGAACAGCACGGCACAGGATTGTTACTCATCTCTATGGGCATTATTCTCAAGATGGTT 959 || ||||||||||| || |||||||||||||||| ||||||||||||||||||||||||| Sbjct 899 ACTGAACAGCACGGTACGGGATTGTTACTCATCTTTATGGGCATTATTCTCAAGATGGTT 958 Query 960 CCTGATCCAAATCCAAACACGAAATCTTCGGGTTCGAGTCAGACACCCGGGAAGTTGGAA 1019 || |||||||| |||||| | ||||||||||||||| ||||||||||||| || |||||| Sbjct 959 CCGGATCCAAACCCAAACCCCAAATCTTCGGGTTCGGGTCAGACACCCGGAAAATTGGAA 1018 Query 1020 CGGGTTAAGTTTGAGAAGGAAGACGATGAAGAGAGCCGGCCTTTGGTCTAATAC-CGACG 1078 ||||||||||||||||||||||||||||||||||| || || ||||||||||| ||||| Sbjct 1019 CGGGTTAAGTTTGAGAAGGAAGACGATGAAGAGAGTCGTCCATTGGTCTAATAAACGACG 1078 Query 1079 AGA 1081 ||| Sbjct 1079 AGA 1081 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 53463580425 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5