BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg920106

Length=247
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT3G10620.1 | Symbols: ATNUDX26, NUDX26 | nudix hydrolase homol...   169    1e-41


> AT3G10620.1 | Symbols: ATNUDX26, NUDX26 | nudix hydrolase homolog 
26 | chr3:3320263-3321724 FORWARD LENGTH=810
Length=810

 Score =  169 bits (91),  Expect = 1e-41
 Identities = 101/106 (95%), Gaps = 0/106 (0%)
 Strand=Plus/Plus

Query  1    TCTGAAATTTACTGGCAAAGATGAAGAAATCAATCTTCTTGGTGATGGAACTGAGAAACC  60
            ||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||
Sbjct  477  TCTGAAATTTACTGGGAAAGATGAAGAAATCAATCTTCTTGGCGATGGTACTGAGAAACC  536

Query  61   TGAGTTTGGTCAATGGTCCTGGACTTCTCCTGATCAAGTCATTGAA  106
            |||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct  537  TGAGTTTGGTGAATGGTCCTGGACTTCTCCTGATCAAGTCGTTGAA  582



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 11209708027


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5