BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg920157
Length=1346
Score E
Sequences producing significant alignments: (Bits) Value
AT1G12920.1 | Symbols: ERF1-2 | eukaryotic release factor 1-2 |... 2285 0.0
AT3G26618.1 | Symbols: ERF1-3 | eukaryotic release factor 1-3 |... 1548 0.0
AT5G47880.1 | Symbols: ERF1-1 | eukaryotic release factor 1-1 |... 896 0.0
> AT1G12920.1 | Symbols: ERF1-2 | eukaryotic release factor 1-2
| chr1:4396348-4398193 REVERSE LENGTH=1656
Length=1656
Score = 2285 bits (1237), Expect = 0.0
Identities = 1309/1345 (97%), Gaps = 0/1345 (0%)
Strand=Plus/Plus
Query 2 ACCTCGAGAGAAGCAAAAAATGGCAGAAGAATCAGATACGAACATCGAGATCTGGAAGAT 61
|||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||
Sbjct 126 ACCTCGAGAGAAGCTAAAAATGGCAGAAGAAGCGGATACGAACATCGAGATCTGGAAGAT 185
Query 62 TAAGAAACTAATCAAGGGACTTGAATCAGCTAGAGGTAATGGAACGAGTATGATCTCTCT 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 186 TAAGAAACTAATCAAGGGACTTGAATCAGCTAGAGGTAATGGAACGAGTATGATCTCTCT 245
Query 122 TATTATGCCTCCTCGTGATCAAGTATCTCGTGTCACAAAGATGCTTGGTGATGAATATGG 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 246 TATTATGCCTCCTCGTGATCAAGTATCTCGTGTCACAAAGATGCTTGGTGATGAATATGG 305
Query 182 AACTGCTTCAAACATTAAGAGTCGAGTCAATCGTCAATCTGTTTTGTCTGCCATTACTTC 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 306 AACTGCTTCAAACATTAAGAGTCGAGTCAATCGTCAATCTGTTTTGTCTGCCATTACTTC 365
Query 242 TGCTCAACAAAGGTTGAAGCTTTACAACAAGGTTCCTACTAATGGTCTTGTTCTCTATAC 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 366 TGCTCAACAAAGGTTGAAGCTTTACAACAAGGTTCCTACTAATGGTCTTGTTCTCTATAC 425
Query 302 CGGCACTATTGTTAATGATGATGGTAAAGAGAAGAAAGTCACCTTTGATTTCGAGCCCTT 361
|||||| |||||||||||||| |||||||||||||| || || |||||||||||||||||
Sbjct 426 CGGCACCATTGTTAATGATGACGGTAAAGAGAAGAAGGTGACGTTTGATTTCGAGCCCTT 485
Query 362 TAGGCCGATTAACGCTTCCTTGTACCTTTGTGACAACAAGTTCCATACCGAGGCATTGAA 421
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 486 TAGGCCGATTAATGCTTCCTTGTACCTTTGTGACAACAAGTTCCATACTGAGGCATTGAA 545
Query 422 CGAGCTTCTTGAGTCTGATGACAAGTTTGGTTTCATTGTTATGGATGGTAATGGGACACT 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 546 CGAGCTTCTTGAGTCTGATGACAAGTTTGGTTTCATTGTTATGGATGGTAATGGGACACT 605
Query 482 GTTTGGTACTTTGAGTGGGAATACTAGAGAGGTTCTTCATAAGTTTACTGTTGATCTCCC 541
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 606 GTTTGGAACTTTGAGTGGGAATACTAGAGAGGTTCTTCATAAGTTTACTGTTGATCTCCC 665
Query 542 GAAGAAGCACGGTAGAGGAGGACAATCTGCGCTTCGTTTTGCTCGACTTAGGATGGAGAA 601
|||||||||||| ||||||||||| ||||| ||||||||||| || ||||||||||||||
Sbjct 666 GAAGAAGCACGGAAGAGGAGGACAGTCTGCACTTCGTTTTGCCCGTCTTAGGATGGAGAA 725
Query 602 GAGACACAATTATGTTAGGAAAACCGCTGAGCTTGCTACACAGTTTTACATCAATCCAGC 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 726 GAGACACAATTATGTTAGGAAAACCGCTGAGCTTGCTACACAGTTTTACATCAATCCAGC 785
Query 662 TACGAGTCAGCCTAATGTCTCTGGTCTGATCCTTGCTGGTTCAGCTGATTTTAAAACTGA 721
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 786 TACGAGTCAGCCTAATGTCTCTGGTCTGATCCTTGCTGGTTCAGCTGATTTCAAAACTGA 845
Query 722 GCTCAGTCAGTCTGAGTTGTTTGATCCTCGTCTTCAAGCTAAGATATTGAATGTTGTCGA 781
||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 846 GCTCAGTCAATCAGAGTTGTTTGATCCTCGTCTTCAAGCTAAGATATTGAATGTTGTTGA 905
Query 782 TGTTTCTTACGGAGGTGAAAACGGTTTCAACCAAGCTATTGAGCTGTCTGCTGAGATTCT 841
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 906 TGTTTCTTACGGAGGTGAAAACGGTTTCAACCAAGCGATTGAGCTGTCTGCTGAGATTCT 965
Query 842 ATCAAATGTGAAGTTCATACAGGAGAAGAAACTGATTGGGAAGTACTTTGAGGAGATAAG 901
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 966 ATCCAATGTGAAGTTCATACAGGAGAAGAAACTGATTGGGAAGTACTTTGAGGAGATAAG 1025
Query 902 TCAAGATACCGGGAAATACGTTTTCGGTGTGGAGGATACTCTAAAGGCTCTAGAAATGGG 961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1026 TCAAGATACCGGGAAATACGTTTTCGGTGTGGAGGATACTCTAAAGGCTCTAGAAATGGG 1085
Query 962 TGCTATCGAAACCCTTATCGTGTGGGAGAATCTGGATATAAACAGGTACGAGCTAAAGAA 1021
|||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct 1086 TGCTATCGAAACCCTTATCGTGTGGGAGAATCTGGACATAAACAGGTATGAGCTAAAGAA 1145
Query 1022 CAGCACGACAGGAGAAATGGTGGTGAAACACCTTGGGAAAGATCAAGAGTCAGATACAAG 1081
||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct 1146 CAGTACGACAGGAGAAATGGTGGTGAAACACTTTGGGAAAGATCAAGAGTCTGATACAAG 1205
Query 1082 CAACTTCCATGATTCAGAGACTAACGCCGAGCTAGAAGTCCAGGAGAAGATGCCTCTGCT 1141
||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||
Sbjct 1206 CAACTTCCATGATTCAGAGACTAACGCGGAGCTAGAAGTACAGGAGAAGATGCCTCTACT 1265
Query 1142 AGAATGGTTTGCAAATGAGTACAAACGTTTCGGCTGCACACTTGAGTTTGTGACTAACAA 1201
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1266 CGAATGGTTTGCAAATGAGTACAAACGTTTCGGCTGCACTCTTGAGTTTGTGACTAACAA 1325
Query 1202 ATCCCAAGAAGGGTCACAGTTTTGCAGAGGTTTTGGTGGGATTGGTGGGATGTTACGTTA 1261
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1326 ATCCCAAGAAGGGTCACAGTTTTGCAGAGGTTTTGGTGGGATTGGTGGTATGTTACGTTA 1385
Query 1262 CCAGCTTGACATGAGGACATTTGATGAGTTATCGGATACTGAAGTTTATGAAGATTCTGA 1321
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 1386 CCAGCTTGACATGAGGACATTTGATGAGTTATCAGATACTGAAGTTTACGAAGATTCTGA 1445
Query 1322 TTAAAGTGGGTAAACTTTTGGTGAT 1346
|||||||||| ||||||||||||||
Sbjct 1446 TTAAAGTGGGAAAACTTTTGGTGAT 1470
> AT3G26618.1 | Symbols: ERF1-3 | eukaryotic release factor 1-3
| chr3:9788605-9790351 FORWARD LENGTH=1581
Length=1581
Score = 1548 bits (838), Expect = 0.0
Identities = 1163/1321 (88%), Gaps = 18/1321 (1%)
Strand=Plus/Plus
Query 16 AAAAA-ATGGCAG---AAGAATCAGATACGAACATCGAGATCTGGAAGATTAAGAAACTA 71
||||| ||||||| |||||||||||| |||||| ||||| |||||||||||||| |||
Sbjct 78 AAAAACATGGCAGACCAAGAATCAGATAAGAACATTGAGATTTGGAAGATTAAGAAGCTA 137
Query 72 ATCAAGGGACTTGAATCAGCTAGAGGTAATGGAACGAGTATGATCTCTCTTATTATGCCT 131
||||| ||||||||| | || |||||||||||||| ||||||||||||||||| ||||||
Sbjct 138 ATCAAAGGACTTGAAACCGCAAGAGGTAATGGAACAAGTATGATCTCTCTTATAATGCCT 197
Query 132 CCTCGTGATCAAGTATCTCGTGTCACAAAGATGCTTGGTGATGAATATGGAACTGCTTCA 191
||| | ||||||||| |||||||||| |||||||||| ||||||||| ||||| || |||
Sbjct 198 CCTAGAGATCAAGTAGCTCGTGTCACTAAGATGCTTGCTGATGAATACGGAACCGCCTCA 257
Query 192 AACATTAAGAGTCGAGTCAATCGTCAATCTGTTTTGTCTGCCATTACTTCTGCTCAACAA 251
||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct 258 AACATCAAGAGTCGAGTGAATCGTCAATCTGTTTTATCTGCCATTACTTCTGCTCAACAA 317
Query 252 AGGTTGAAGCTTTACAACAAGGTTCCTACTAATGGTCTTGTTCTCTATACCGGCACTATT 311
|| ||||||||||||||||| |||||| | |||||||||||||||||||| || || |||
Sbjct 318 AGATTGAAGCTTTACAACAAAGTTCCTCCGAATGGTCTTGTTCTCTATACTGGAACCATT 377
Query 312 GTTAATGATGATGGTAAAGAGAAGAAAGTCACCTTTGATTTCGAGCCCTTTAGGCCGATT 371
|||| |||||||||||||||||||||||| || ||||||||||||| |||| ||||||
Sbjct 378 GTTACTGATGATGGTAAAGAGAAGAAAGTGACGATTGATTTCGAGCCTTTTAAACCGATT 437
Query 372 AACGCTTCCTTGTACCTT-TGTGACAACAAGTTCCATACCGAGGCATTGAACGAGCTTCT 430
|| ||||| ||||| || |||||||| |||||||| |||||| | ||||| |||||| |
Sbjct 438 AATGCTTCGTTGTA-TTTGTGTGACAATAAGTTCCACACCGAGCCTTTGAATGAGCTT-T 495
Query 431 T-GAGTCTGATGACAAGTTTGGTTTCATTGTTATGGATGGTAATGGGACACTGTTTGGTA 489
| ||||||||||| |||||||||||||||||||||||||| ||||| || |||||||||
Sbjct 496 TGGAGTCTGATGATAAGTTTGGTTTCATTGTTATGGATGGAAATGGAACTTTGTTTGGTA 555
Query 490 CTTTGAGTGGGAATACTAGAGAGGTTCTTCATAAGTTTACTGTTGATCTCCCGAAGAAGC 549
|||||||||||||||| |||||||||||||||||||| ||||| ||||| ||||| ||||
Sbjct 556 CTTTGAGTGGGAATACAAGAGAGGTTCTTCATAAGTTCACTGTCGATCTTCCGAAAAAGC 615
Query 550 ACGGTAGAGGAGGACAATCTGCGCTT-CGTTTTGCTCGACTTAGGATGGAGAAGAGACAC 608
|||| |||||||||||||||||| || || |||||||| ||||||||||||||||||||
Sbjct 616 ACGGAAGAGGAGGACAATCTGCG-TTGCGATTTGCTCGTCTTAGGATGGAGAAGAGACAT 674
Query 609 AATTATGTTAGGAAAACCGCTGAGCTTGCTACACAGTTTTACATCAATCCAGCTACGAGT 668
|| ||||| ||||||||||| |||||||| || ||||||||||| |||||||||||||||
Sbjct 675 AACTATGTGAGGAAAACCGCGGAGCTTGCCACTCAGTTTTACATTAATCCAGCTACGAGT 734
Query 669 CAGCCTAATGTCTCTGGTCTGATCCTTGCTGGTTCAGCTGATTTTAAAACTGAGCTCAGT 728
|||||||||||||||||||| || |||||||||||||| |||||||| || ||||| |||
Sbjct 735 CAGCCTAATGTCTCTGGTCTTATACTTGCTGGTTCAGCGGATTTTAAGACCGAGCTAAGT 794
Query 729 CAGTCTGAGTTGTTTGATCCTCGTCTTCAAGCTAAGATATTGAATGTTGTCGATGTTTCT 788
|| || || ||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 795 CAATCAGAACTGTTTGATCCTCGTCTTCAAGCTAAGATATTGAATGTGGTTGATGTTTCT 854
Query 789 TACGGAGGTGAAAACGGTTTCAACCAAGCTATTGAGCTGTCTGCTGAGATTCTATCAAAT 848
|||||||| || || |||||||||||||| |||||||||||||||||||||||||| |||
Sbjct 855 TACGGAGGAGAGAATGGTTTCAACCAAGCAATTGAGCTGTCTGCTGAGATTCTATCTAAT 914
Query 849 GTGAAGTTCATACAGGAGAAGAAACTGATTGGGAAGTACTTTGAGGAGATAAGTCAAGAT 908
|||||||||||||| || |||||| ||||||||||||||||||||||||| ||||||||
Sbjct 915 GTGAAGTTCATACAAGAAAAGAAATTGATTGGGAAGTACTTTGAGGAGATTAGTCAAGAC 974
Query 909 ACCGGGAAATACGTTTTCGGTGTGGAGGATACTCTAAAGGCTCTAGAAATGGGTGCTATC 968
|| |||||||| ||||||||||| || |||||| |||||||||| |||||||||||| |
Sbjct 975 ACTGGGAAATATGTTTTCGGTGTTGAAGATACTTTAAAGGCTCTGGAAATGGGTGCTGTT 1034
Query 969 GAAACCCTTATCGTGTGGGAGAATCTGGATATAAACAGGTACGAGCTAAAGAACAGCACG 1028
|| || ||||| |||||||||||||| ||||| || ||||| ||| ||||||||| ||||
Sbjct 1035 GAGACTCTTATAGTGTGGGAGAATCTAGATATTAATAGGTATGAGTTAAAGAACAACACG 1094
Query 1029 ACAGGAGAAATGGTGGTGAAACACCTTGGGAAAG-ATCAAGAGTCAGATAC-AA-GCAAC 1085
|| |||||||| ||| | || || ||||||||| |||||||| | | || || ||||
Sbjct 1095 ACCGGAGAAATCGTGATTAAGCAT-TTGGGAAAGGATCAAGAGA-ACA-ACCAAAGCAAT 1151
Query 1086 TTCCATGATTCAGAGACTAACGCCGAGCTAGAAGTCCAGGAGAAGATGCCTCTGCTAGAA 1145
||||||||| |||||||||| || ||| ||||||| |||||||||||||||||||| |||
Sbjct 1152 TTCCATGATGCAGAGACTAATGCAGAGTTAGAAGTTCAGGAGAAGATGCCTCTGCTTGAA 1211
Query 1146 TGGTTTGCAAATGAGTACAAACGTTTCGGCTGCACACTTGAGTTTGTGACTAACAAATCC 1205
|||||||| || || || |||||||| || || ||||||||||||||||||||||| |||
Sbjct 1212 TGGTTTGCTAACGAATATAAACGTTTTGGTTGTACACTTGAGTTTGTGACTAACAAGTCC 1271
Query 1206 CAAGAAGGGTCACAGTTTTGCAGAGGTTTTGGTGGGATTGGTGGGAT-GTTACGTTACCA 1264
|||||||| ||||| ||||||||||| ||||| || |||||||| || ||| || |||||
Sbjct 1272 CAAGAAGGATCACAATTTTGCAGAGGCTTTGGCGGTATTGGTGG-ATTGTTGCGGTACCA 1330
Query 1265 GCTTGACATGAGGACATTTGATGAGTTATCGGATACTGAAGTTTATGAAGATTCTGATTA 1324
|||||| ||||||||||| ||||| ||||| ||| ||||||||||||||| || |||||
Sbjct 1331 GCTTGATATGAGGACATTCGATGAATTATCCGATGGTGAAGTTTATGAAGACTCAGATTA 1390
Query 1325 A 1325
|
Sbjct 1391 A 1391
> AT5G47880.1 | Symbols: ERF1-1 | eukaryotic release factor 1-1
| chr5:19386100-19388562 REVERSE LENGTH=1767
Length=1767
Score = 896 bits (485), Expect = 0.0
Identities = 1011/1261 (80%), Gaps = 52/1261 (4%)
Strand=Plus/Plus
Query 41 GAACATCGAGATCTGGAAGATTAAGAAACTAATCAAGGGACTTGAATCAGCTAGAGGTAA 100
|||||| ||||| |||||||||||||| || ||||| ||||||| | ||||| |||||
Sbjct 105 GAACATTGAGATATGGAAGATTAAGAAGCTGATCAAATCACTTGAAGCTGCTAGGGGTAA 164
Query 101 TGGAACGAGTATGATCTCTCTTATTATGCCTCCTCGTGATCAAGTATCTCGTGTCACAAA 160
|||||| || |||||||| || || |||||||| |||||||| || |||||||| || ||
Sbjct 165 TGGAACCAGCATGATCTCACTCATCATGCCTCCGCGTGATCAGGTCTCTCGTGTTACCAA 224
Query 161 GATGCTT-GGTGATGAATATGGAACTGCTTCAAACATTAAGAGTC-GAGTCAATCGTCAA 218
|||| || |||||||| |||||||| || |||||||| ||||| | ||||||||||||||
Sbjct 225 GATG-TTGGGTGATGAGTATGGAACCGCGTCAAACATCAAGAG-CAGAGTCAATCGTCAA 282
Query 219 TCTGTTTTGTCTGCCATTACTTCTGCTCAACAAAGGTTGAAGCTTTACAACAAGGTTCCT 278
||||||||| ||||| ||||||||||| ||||||||||| |||||||||| ||| |||
Sbjct 283 TCTGTTTTGGGGGCCATAACTTCTGCTCAGCAAAGGTTGAAACTTTACAACAGGGTCCCT 342
Query 279 ACTAATGGTCTTGTTCTCTATACCGGCACTATTGTTAATGATGATGGTAAAGAGAAGAAA 338
||||||||||||| |||||||| || || ||||||||||| |||||||| ||||||||
Sbjct 343 CCTAATGGTCTTGTACTCTATACTGGAACCATTGTTAATGAGGATGGTAAGGAGAAGAAG 402
Query 339 GTCACCT-TTGA-TTTCGAGCCCTTT-AGGCCGATTAACGCTTCCT-TGTACCTTTGTGA 394
|| | || |||| ||| ||| ||||| || || || || |||| || | |||||||||||
Sbjct 403 GTTA-CTATTGACTTT-GAG-CCTTTCAGACCCATCAATGCTT-CTCTCTACCTTTGTGA 458
Query 395 CAACAAGTTCCATACCGAGGCATTGAACGAGCTTCTT-GAGTCTGATGACAAGTTTGGTT 453
||||||||| || || || || ||||| || || || ||||||||||||||||||||||
Sbjct 459 CAACAAGTTTCACACGGAAGCTTTGAATGA-ATTGTTGGAGTCTGATGACAAGTTTGGTT 517
Query 454 TCATTGTTATGGATGGTAATGGGACACTGTTTGGTACT-TTGAGTGGGAATACTAGAGAG 512
||||||| |||||||| || ||||| || ||||| ||| || ||||| || || | |||
Sbjct 518 TCATTGTAATGGATGGAAACGGGACTCTCTTTGGAACTCTT-AGTGGTAACACCCGTGAG 576
Query 513 GTTCTTCATAAGTT-TACTGTTGATCTCCCGAAGAAGCACGGTAGAGGAGGACAATCTGC 571
|| ||||| ||||| | |||||||||| |||||||| ||||| ||||||||||| |||||
Sbjct 577 GTACTTCACAAGTTCT-CTGTTGATCTTCCGAAGAAACACGGAAGAGGAGGACAGTCTGC 635
Query 572 GCTTCGTTTTGCTCGACTTAGGATGGAGAAGAGACACAATTATGTTAGGAAAACCGCTGA 631
||||||||||| || || | ||||||||| | ||||||||||||||||| || |||||
Sbjct 636 TCTTCGTTTTGCCCGTCTCCGTATGGAGAAGCGTCACAATTATGTTAGGAAGACTGCTGA 695
Query 632 GCTTGCTACACAGTTTTACATCAATCCAGCTACGAGTCAGCCTAATGTCTCTGGTCTGAT 691
||| || ||||||| ||||||||||| ||||| |||||||||||||| ||||| |||||
Sbjct 696 GCTCGCCACACAGTACTACATCAATCCTGCTACAAGTCAGCCTAATGTGTCTGGACTGAT 755
Query 692 CCTTGCTGGTTCAGCTGATTTTAAAACTGAGCTCAGTCAGTCTGAGT-TGTTTGATCCTC 750
|||||||||||||| ||||| || |||||| | ||||||||||| | |||||||||| |
Sbjct 756 TCTTGCTGGTTCAGCAGATTTCAAGACTGAGTTGAGTCAGTCTGA-TATGTTTGATCCCC 814
Query 751 GTCTT-CAAGCTAAGATATTGAATGTTGTCGATGTTTCTTACGGAGGTGAAAACGGTTTC 809
| || | || |||||| ||||||| || ||||| || || ||||| ||||| |||||
Sbjct 815 GACTGGCT-GCGAAGATACTGAATGTGGTGGATGTATCATATGGAGGAGAAAATGGTTTT 873
Query 810 AACCAAGCTATTGAGCTGTCTGCTGAGATTCTAT-CAAATGTGAAGTTCATACAGGAGAA 868
|| ||||||||||||||||| ||||| || || | | ||||||||||| || || |||||
Sbjct 874 AATCAAGCTATTGAGCTGTCAGCTGAAATCCT-TGCGAATGTGAAGTTTATCCAAGAGAA 932
Query 869 GAAACTGATTGGGAAGTACTTTGAGGAGATAAGTCAAGATACCGGGAAATACGT-TTTCG 927
| ||||||||||||||||||||||||||||| || || || ||||| || || ||| |
Sbjct 933 GCGTCTGATTGGGAAGTACTTTGAGGAGATAAGCCAGGACACGGGGAAGTATGTGTTT-G 991
Query 928 GTGTGGAGGATAC-TCTAAAGGCTCTAGAAA-TGGGTGCTATCGAAACCCTTATCGTGTG 985
||||||| ||||| | | || ||| | || ||| |||||| || || || || || ||
Sbjct 992 GTGTGGAAGATACGT-TGAACGCTTTGGAGTCTGG-TGCTATTGAGACACTGATTGTATG 1049
Query 986 GGAGAATCTGGATATAAACAGGTACGAGCTAAAGAACAGCACGACAGGAGAAA-TGGTGG 1044
||| ||||| ||||| ||||| || | | | |||||||| |||| || |||| || ||
Sbjct 1050 GGAAAATCTCGATATCAACAGATATGTGATGAAGAACAGTGCGACTGGTGAAACTG-TGA 1108
Query 1045 TGAAACACCTTGGGA-AAG-ATCAAGA-GTCAGATACA-AGCAACTTCCATG-ATTCAGA 1099
| |||||||| | | ||| | ||||| | || | || || |||||| | | | | ||
Sbjct 1109 TCAAACACCT-GA-ACAAGGAACAAGAAGCCA-ACACTGAG-AACTTCAAAGTAGCC-GA 1163
Query 1100 GACTAACGCCGAGCTA-GAA-GTCCAGGAGAAGATGCC-TCTGCTAGAATGGTTTGCAAA 1156
| | || | ||| | | || |||||||| || | | | || || ||| |||| ||
Sbjct 1164 CAGTGACTT-G-GCTTTGGACGTGGAGGAGAAGCTGTCGT-TACTGGAGTGGCTTGCCAA 1220
Query 1157 TGAGTACAAACGTTTCGGCTGCACACTT-GAGTTTGTGACTAACAAATCCCAAGAAGGGT 1215
|||||||| ||||| || || | || ||||||||||| ||||| || || ||||| |
Sbjct 1221 TGAGTACAGGCGTTTTGGTTGTGCG-TTAGAGTTTGTGACCAACAAGTCACAGGAAGGTT 1279
Query 1216 CACAGTTTTGCAGAGGTTTTGGTGGGATTGGTGGGATG-TTACGTTACCAGCTTGACATG 1274
| |||||||||||||| ||||| || || || || || || ||||||||||||||||||
Sbjct 1280 CTCAGTTTTGCAGAGGGTTTGGAGGAATCGGAGGAATACTT-CGTTACCAGCTTGACATG 1338
Query 1275 A 1275
|
Sbjct 1339 A 1339
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 66264719400
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5