BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg920164
Length=1221
Score E
Sequences producing significant alignments: (Bits) Value
AT1G12990.1 | Symbols: | beta-1,4-N-acetylglucosaminyltransfer... 2028 0.0
AT3G27540.1 | Symbols: | beta-1,4-N-acetylglucosaminyltransfer... 412 3e-114
AT5G14480.1 | Symbols: | beta-1,4-N-acetylglucosaminyltransfer... 302 7e-81
AT3G26445.1 | Symbols: | beta-1,4-N-acetylglucosaminyltransfer... 206 5e-52
> AT1G12990.1 | Symbols: | beta-1,4-N-acetylglucosaminyltransferase
family protein | chr1:4433640-4436075 FORWARD LENGTH=2035
Length=2035
Score = 2028 bits (1098), Expect = 0.0
Identities = 1180/1220 (97%), Gaps = 4/1220 (0%)
Strand=Plus/Plus
Query 4 GGTGGATCTGA-TACTGGGATGTGGTGGATGATGGGAGAAGCTGGTGGACATTACTGTTC 62
||||||||||| | ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 316 GGTGGATCTGAGT-TTGGGATGTGGTGGATGATGGGAGAAGCTGGTGGGCATTACTGTTC 374
Query 63 TAAGAAGACTGATGATATCTGCGGTGGTGTTTGTAGTCAGGAACCTGGAAGATTCTTCAG 122
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 375 TAAGAAGACTGATGATATCTGCGGCGGTGTTTGTAGTCAGGAACCTGGAAGATTCTTCAG 434
Query 123 CTTTTCTAGACTTTGTTGTGCTCTTCGTGGTGTTGATATGAAGACTTATATCTTCTTATT 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 435 CTTTTCTAGACTTTGTTGTGCTCTTCGTGGTGTTGATATGAAGACTTATATCTTCTTATT 494
Query 183 AGTGATTGTTCCCACATGTGTACTCGCTGGTTATGTCCACGGTCAGAAGATTTCTTACTT 242
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 495 AGTGATTGTTCCCACATGTGTACTCGCTGGCTATGTCCACGGTCAGAAGATTTCTTACTT 554
Query 243 TCTCCGGCCATTATGGGAATCACCACCTAAACCTTTTCATGACATTCCTCATTACTACCA 302
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 555 TCTCCGGCCTTTATGGGAATCACCACCTAAACCTTTTCATGACATTCCTCATTACTACCA 614
Query 303 TGAGAATGCTTCTATGGAGACTCTTTGTAAACTCCATGGCTGGGGTGTACGAGAATACCC 362
||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct 615 CGAGAACGCTTCTATGGAGACTCTTTGTAAACTCCATGGCTGGGGTGTTCGAGACTACCC 674
Query 363 TAGACGAGTTTATGATGCGGTTTTGTTCAGTAACGAGCTTGATATCCTCGCTGTTCGGTG 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 675 TAGACGAGTTTATGATGCGGTTTTGTTCAGTAACGAGCTTGATATCCTCGCTGTTCGTTG 734
Query 423 GAGAGAATTGTTTCCTTACATCACTCAGTTTGTCCTTCTAGAATCAAACACGACGTTCAC 482
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 735 GAGAGAATTGTTTCCTTACATCACTCAGTTTGTCCTCCTTGAATCAAACACGACGTTCAC 794
Query 483 TGGGTTGCCTAAGCCTCTTGTGTTTGCTGCTCACCGAGATGAGTTCAAGTTTATCGAGTC 542
||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 795 TGGCTTGCCTAAGCCTCTTGTCTTTGCTGCTCACCGAGATGAGTTCAAGTTTATTGAGTC 854
Query 543 ACGCTTGACTTATGGTACTGTTGGTGGAAGATTTGTCAAAGGGCAGAATCCGTTTTACGA 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 855 ACGCTTGACTTATGGTACTGTTGGTGGAAGATTTGTCAAAGGGCAGAATCCGTTTTACGA 914
Query 603 AGAGGCTTATCAGCGAGTAGCTCTAGATCAGCTTCTGAGAATCGCTGGGATTACTGATGA 662
|||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 915 AGAGGCGTATCAGCGGGTAGCTCTTGATCAGCTTCTGAGAATCGCTGGGATTACTGATGA 974
Query 663 TGACTTGTTGTTAATGTCTGATGTTGATGAGATTCCAAGTAGACACACCATTAACCTTTT 722
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 975 TGACTTGTTGTTAATGTCTGATGTCGATGAGATTCCAAGTAGACACACCATTAACCTTTT 1034
Query 723 AAGGTGGTGCGATGATATCCCGAAGATCCTTCATCTGCGGCTCAAGAACTATCTTTACTC 782
|| ||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 1035 GAGATGGTGCGATGAGATCCCGAAGATACTTCATCTGCGCCTCAAGAACTATCTTTACTC 1094
Query 783 GTTCGAATTCCTTGTTGATAACAAGAGCTGGAGAGCTTCCGTCCACAGATATGAGACGGG 842
||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct 1095 GTTTGAATTCCTTGTTGATAACAAAAGCTGGAGAGCTTCCATCCACAGATATGAGACGGG 1154
Query 843 TAAGACACGGTATGCTCATTATCGACAGTCGGATGAAATCTTGGCGGATGCAGGATGGCA 902
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1155 TAAGACACGGTATGCTCATTATCGACAGTCTGATGAAATCTTGGCGGATGCAGGATGGCA 1214
Query 903 CTGTAGCTTTTGCTTCCGACGGATCAGTGAGTTTATATTCAAGATGAAAGCTTATAGCCA 962
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1215 TTGTAGCTTTTGCTTCCGACGAATCAGTGAGTTTATATTCAAGATGAAAGCTTATAGCCA 1274
Query 963 TAATGATAGAGTGAGGTTTGGTCATTTCTTGAATCCTAAGAGAGTTCAAAGAGTTATATG 1022
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1275 TAATGACAGAGTGAGGTTTGGTCATTTCTTGAATCCTAAGAGAGTTCAAAGAGTTATATG 1334
Query 1023 CAAAGGAGCTGATCTTTTCGATATGCTTCCC-GAAGAGTATACCTTCAAGGAGATAATAG 1081
||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct 1335 CAAAGGAGCTGATCTTTTCGATATGCT-CCCTGAAGAGTATACCTTCAAGGAGATAATAG 1393
Query 1082 GAAAAATGGGTCCAATCCCGCATTCTTTCTCAGCCGTTCATCTTCCTTCGTATCTCCTGG 1141
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1394 GAAAAATGGGTCCAATCCCGCATTCTTTCTCAGCTGTTCATCTTCCTTCGTATCTCCTGG 1453
Query 1142 AAAACGCGGATAAGTACAGATTCCTCTTACCGGGAAATTGCATAAGAGAAACCGAATGAT 1201
|||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||
Sbjct 1454 AAAACGCGGATAAGTACAGATTTCTCTTGCCGGGAAATTGCATAAGAGAAAGCGAATGAT 1513
Query 1202 CGATCGAATCTTCACCACAT 1221
|| |||||||||||||||||
Sbjct 1514 CGTTCGAATCTTCACCACAT 1533
> AT3G27540.1 | Symbols: | beta-1,4-N-acetylglucosaminyltransferase
family protein | chr3:10205308-10207306 FORWARD LENGTH=1772
Length=1772
Score = 412 bits (223), Expect = 3e-114
Identities = 736/974 (76%), Gaps = 74/974 (8%)
Strand=Plus/Plus
Query 256 TGGGAATCACCACCTAAACCTTTTCATGA-CATTCCTCATTACTACCATGAGAATGCTT- 313
||||||||||| || || || ||||| | ||||||||||||||| ||||||||| ||
Sbjct 398 TGGGAATCACCTCCGAAGCCATTTCA-AACCATTCCTCATTACTATAATGAGAATG-TTA 455
Query 314 CTATGGAGA-CTCTTTGTAAACTCCATGGCTGGGG--TGTACGAGAATAC-CCTAGACGA 369
||||||| | |||| |||| || ||||| ||||| | || |||| | | || |||||
Sbjct 456 CTATGGA-ATCTCTCTGTAGTCTTCATGGTTGGGGAAT-TA-GAGACT-CGCCCAGACGG 511
Query 370 GTTTAT-GATGCGGTTTTGTTCAGTAACGAGCTTGATATCCTCGCTGTTCGGTGG-A-GA 426
|||| | || ||||||||||| ||||| ||| ||| | | ||||| | ||| | ||
Sbjct 512 GTTT-TCGACGCGGTTTTGTTTAGTAATGAGAAAGATCTTTTAACTGTTAGATGGAATGA 570
Query 427 GAATTGTTTCCTTACATCACTCAGTTTGTCCTTCTAGAATCAAACACGACGTTCACTGGG 486
| || | ||||||| | || |||||||| |||| ||||| || | ||||| |||||
Sbjct 571 G-CTT-TATCCTTACGTGACACAGTTTGTGATTCTTGAATCTAATTCTACGTTTACTGGT 628
Query 487 TTGCCTAAGCCTCTT-GTGTTTGCTG-CTCACCGA-GATGAGTTCAAGTTTATCGAGTCA 543
|||||||| || || |||||| | | | | ||| |||| |||||| | ||| |
Sbjct 629 TTGCCTAAACC-ATTGGTGTTT-AAGAGT-AATAAGGATCAGTTTAAGTTTGTGGAGCCG 685
Query 544 C-GCTTGACTTATGGTACTG-TTGGTGGAAGATTT-GTCAAAGGGC-AGAATCCGTTT-T 598
| || | |||||||| || | |||||||| | ||| | ||| ||| ||||||||||| |
Sbjct 686 CGGC-TAACTTATGGGAC-GATTGGTGGACGGTTTAG-GAAA-GGCGAGAATCCGTTTGT 741
Query 599 ACGAAGAGGCTTATCAGCGAGTAGC-TCTAGATCAGCTT-CTGAGAATCGCTGGGATTAC 656
|||||| || ||||||||||| || | | |||||| || || || || ||||| ||| |
Sbjct 742 -CGAAGAAGCGTATCAGCGAGTTGCGT-TGGATCAG-TTGCTTAGGATTGCTGGTATT-C 797
Query 657 -TGATGATGACTTGTTGTTAATGTCTGATGTTGATGAGATTCCAAGTAG-ACACACCATT 714
|| ||||| |||||| ||||||||||||||||||||||||| ||| | || || ||
Sbjct 798 AAGAAGATGATTTGTTGATAATGTCTGATGTTGATGAGATTCCTAGT-GCTCATACTATC 856
Query 715 AACCTTTTAAGGTGGTGCGATGATA-TCC-CGAAGATCCTTCATCTGCGGCTCAAGAACT 772
|| ||||| || ||||| ||||||| ||| | || | ||||| || | | | ||||| |
Sbjct 857 AATCTTTTGAGATGGTGTGATGATATTCCTC-CAG-TTCTTCACCTTCAGTTGAAGAATT 914
Query 773 ATCTT-TACTCGTTCGAATTCCT-TGTTGATAACAAGAGCTGGAGAGCTTCCGTCCACAG 830
|| || || || |||||| | || ||| |||| ||||||||||||||| || | ||| |
Sbjct 915 AT-TTGTATTCTTTCGAA-TACTATGTCGATAGCAAGAGCTGGAGAGCGTCTATACACCG 972
Query 831 ATATGAG-AC-GGGTAAGACACGGTATGCTCATTAT-CGACAGTCG-GATGAAATCTTGG 886
|| || | ||| || || ||||||||||||| | || ||| | ||| || || |
Sbjct 973 TTA-CAGTCCAGGG-AAAACGCGGTATGCTCATT-TCCGTCAG-AGTAATGTTATGTTAG 1028
Query 887 CGGATGCAGGATGGCACTGTAGCTTTTGCTTCCGACGGATCAGTGAGTTTATATTCAAGA 946
| ||| | |||||||| |||||||| || ||||| || |||||||||||||||||||
Sbjct 1029 CTGATTCTGGATGGCATTGTAGCTTCTGTTTCCGTTATATAAGTGAGTTTATATTCAAGA 1088
Query 947 TGAAAGCTTATAGCCATA-ATGATAGAGTGAGGTT-TGGTCATTTCTTGAATCCTAAG-A 1003
||||||||||||| ||| | || | || || || | ||||| | ||||||| ||| |
Sbjct 1089 TGAAAGCTTATAGTCATTCA-GACCGTGTCAGATTCTC-TCATTACCTGAATCC-AAGGA 1145
Query 1004 G-AGTTCAAAGA-GTTATATGCAAAGGAGCTGATCT-TTTCGATATGCTTCCC-GAAGAG 1059
| | ||||| || ||||| ||||||||| ||||| | ||| |||||| || || |||||
Sbjct 1146 GGA-TTCAA-GATGTTATTTGCAAAGGAACTGATTTGTTT-GATATG-TTACCTGAAGAA 1201
Query 1060 TATACCTTCAAGGAGATAATAGGAAAAATGGGTCCAATCCCGCATTCTT-TCTCAGCCGT 1118
|| || ||||||||||| ||||| |||||||| || | || | |||| | ||||| ||
Sbjct 1202 TACACATTCAAGGAGATTATAGGCAAAATGGGACCTGTACCTCGGTCTTAT-TCAGCGGT 1260
Query 1119 TCATCTTCCTTCGTATCTCCTGGAAAACGCGGATAAGTACAGATTCCTCTTACCGGGAAA 1178
||||||||||||||| || ||| | ||||| || |||||| || | | || || || ||
Sbjct 1261 TCATCTTCCTTCGTACCTACTGTATAACGCCGAGCAGTACAAATACTTGTTGCCTGGTAA 1320
Query 1179 TTGCATAAGAGAAA 1192
||||||||||||||
Sbjct 1321 TTGCATAAGAGAAA 1334
> AT5G14480.1 | Symbols: | beta-1,4-N-acetylglucosaminyltransferase
family protein | chr5:4667774-4670106 FORWARD LENGTH=1787
Length=1787
Score = 302 bits (163), Expect = 7e-81
Identities = 720/978 (74%), Gaps = 82/978 (8%)
Strand=Plus/Plus
Query 256 TGGGAATCACCACCTAAA-CCTTTTCATGAC-ATTCCTCATTACTACCATGAGAATGCTT 313
|||||||| ||||| ||| || ||||| || | || ||||||||||||||||| || |
Sbjct 430 TGGGAATCTCCACC-AAAGCCGTTTCA-AACGCTACCCCATTACTACCATGAGAACGCCT 487
Query 314 CTATGG-AGACTCTTTGTAAACTCCATGGCTGGGGTGTA-CGAGAATAC-CCTAGACGAG 370
| |||| | || || || | || ||||||| || | || |||| | || ||| | |
Sbjct 488 CCATGGCA-ACACTCTGCAGTCTTCATGGCT-GGAAACACCGTGAAT-CTCCGAGAAGGG 544
Query 371 T-TTATGATGCGGTTTTGTTCAGTAACG-AGCTTGATATCCTCGCTGTTCGGTGGAGAGA 428
| || |||||| || |||||||| || | || ||||||| || || | ||||||| |||
Sbjct 545 TCTT-TGATGCTGTGTTGTTCAGCAATGAAG-TTGATATGCTTACTATCCGGTGGAAAGA 602
Query 429 -ATTGTTTCCTTACATCACTCAGTTTGTCCTTCTAGAATCAAACACGACGTTCACTGGGT 487
|| | ||||||||| || |||||||| | || ||||||||| | || |||||||| |
Sbjct 603 GCTT-TATCCTTACATAACACAGTTTGTGATCCTTGAATCAAACTCTACTTTCACTGGTT 661
Query 488 TGCCTAAGCCTCTTGTGTTTGC--TGCTCACCGAGATG-AGTTCAAGTTTATC-GAGTC- 542
||||||| ||| ||| |||| | || | |||| | ||||| ||||| | ||| |
Sbjct 662 TGCCTAAACCT-TTG-GTTTTCAATGGGAATCGAG-CGAAGTTCGAGTTT-GCTGAGCCG 717
Query 543 ACGCTTGACTTAT-GGTACTGTTGGTGGAAGATTTGTCAAAGG-GCAGAATCCGTTT-TA 599
| || ||| |||| || || ||| ||| |||| ||||| | | || |||||| |
Sbjct 718 AGGC-TGAGTTATGGGAAC-ATTGCAGGACGATTCAAGAAAGGAG-AAAACCCGTTTGT- 773
Query 600 CGAAGAGGCTTATCAG-CGAGTAGC-TCTAGATCAGCTTCTGAGAATCGCTGGGATTA-C 656
||||| ||||| ||| || | || | | |||||||| | ||| | ||||| | ||
Sbjct 774 GGAAGAAGCTTACCAGAGGA-TTGCAT-TGGATCAGCTGATCAGACTGGCTGGTA-TAGA 830
Query 657 TGATGATGACT-TGTTGTTAATGTCTGATGTTGATGAGATTCCAAGTAG-ACACACCATT 714
|| ||||| | ||||| ||||||||||||||||||||||||| || | || |||||
Sbjct 831 AGAAGATGA-TCTGTTGATAATGTCTGATGTTGATGAGATTCCTAG-CGCTCATACCATC 888
Query 715 AACCT-TTTAAGGTGGTGCGAT-GATATCCCGA-AGATCCTTCATCTGCGGCTCAAGAAC 771
|| || || || ||||||||| |||| ||| | ||| |||||||| | | | || |||
Sbjct 889 AATCTGCTT-AGATGGTGCGATGGATA-CCC-ACCGATTCTTCATCTTCAGTTGAAAAAC 945
Query 772 TATCTT-TACTCGTTCGAATTCCTT-GTTGATAACAAGAGCTGGAGAGCTTCCGTCCA-C 828
|| ||| ||||| |||| | | ||| ||||| ||||| |||||||||||||| | || |
Sbjct 946 TA-CTTATACTCATTCG-AGTACTTCGTTGACAACAAAAGCTGGAGAGCTTCTATTCATC 1003
Query 829 AGATATGAGAC-GGGTAAGACACGGTATGCTCATTATCGACAGTCGGATG-AA-A-TC-- 882
|| || || | ||| ||||| || || ||||||| || | ||| | | || | ||
Sbjct 1004 AG-TACAAGCCTGGG-AAGACTCGATACGCTCATT-TC--C-GTC-AAGGCAACACTCTT 1056
Query 883 TTGGCGGATGCAGGATGGCACTGTAGCTTT-TGCTTCCGACGGATCAGTGAGTTTATATT 941
|| || ||| | || ||||| || || ||| || ||| | | |||||||||||||||||
Sbjct 1057 TTAGCAGATTCTGGTTGGCATTGCAG-TTTCTGTTTCAGGCACATCAGTGAGTTTATATT 1115
Query 942 CAAGATGAAAGCTTATAGCCATAATGATAGAGTGAGGTT-TGGTCATT-TCTTGAATCCT 999
|||||||||||| || || || ||||| | || || || | ||||| ||| || ||
Sbjct 1116 CAAGATGAAAGCGTACAGTCACAATGACCGGGTCAGATTCTC-TCATTATCTA-AACCCA 1173
Query 1000 AAGAGAGTTCAAAGA-GTTATATGCAAAGGAGCTGATCTTTTCGATATGCTTCCCGAAGA 1058
|| ||| | ||| || || || || |||||| ||||||| |||||||||||||| |||||
Sbjct 1174 AAAAGAATACAA-GATGTGATCTGTAAAGGAACTGATCTGTTCGATATGCTTCCTGAAGA 1232
Query 1059 GTATACCTTCAAGGAGATAATAGGAAAAATGGGTCCAATCCCGCATTCTT-TCTCAGCCG 1117
|||||| |||| ||| || || || ||| | ||||||||||||| |||| | || || |
Sbjct 1233 GTATACGTTCAGGGAAATCATCGGGAAACTAGGTCCAATCCCGCGGTCTTAT-TCCGCAG 1291
Query 1118 TTCATCTTCCTTCGT-ATCTCCTGGAAAACGCGGATAAGT-ACAGATTCCTCTTACC-GG 1174
||||||| || | | |||| | ||||| || || | || ||| || | | ||||| ||
Sbjct 1292 TTCATCTACCAGC-TCATCTGATAGAAAAAGCTGAGA-GTTACAAATACTTGTTACCTGG 1349
Query 1175 GAAATTGCATAAGAGAAA 1192
||| | ||||||| ||||
Sbjct 1350 GAACT-GCATAAGGGAAA 1366
> AT3G26445.1 | Symbols: | beta-1,4-N-acetylglucosaminyltransferase
family protein | chr3:9680120-9680746 REVERSE LENGTH=357
Length=357
Score = 206 bits (111), Expect = 5e-52
Identities = 172/202 (85%), Gaps = 2/202 (1%)
Strand=Plus/Plus
Query 663 TGACTTGTTGTTAATGTCTGATGTTGATGAGATTCCAAGTAGACACACCATTAACCTTTT 722
||| |||||| |||||||||||||||||||||| || |||||||| || | ||||||||
Sbjct 141 TGATTTGTTGATAATGTCTGATGTTGATGAGATCCCGAGTAGACATACTGTAAACCTTTT 200
Query 723 AAGGTGGTGCGATGATATCCCGAAGATCCTTCATCTGCGGCTCAAGAACTA-TCTTTACT 781
|| |||||| |||| || || |||||| |||||| |||||||||||| | |||||| |
Sbjct 201 GAGATGGTGCAATGAGATTACGCAGATCCCTCATCTACGGCTCAAGAAC-AGTCTTTATT 259
Query 782 CGTTCGAATTCCTTGTTGATAACAAGAGCTGGAGAGCTTCCGTCCACAGATATGAGACGG 841
|||| || |||||| |||||||||||||||||||||||||||| ||||| | | ||| ||
Sbjct 260 CGTTTGAGTTCCTTCTTGATAACAAGAGCTGGAGAGCTTCCGTGCACAGGTTTCAGATGG 319
Query 842 GTAAGACACGGTATGCTCATTA 863
|||| ||||| |||||||||||
Sbjct 320 GTAAAACACGTTATGCTCATTA 341
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 59989651275
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5