BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg920209 Length=1081 Score E Sequences producing significant alignments: (Bits) Value AT1G13300.1 | Symbols: HRS1 | myb-like transcription factor fam... 1692 0.0 AT1G68670.1 | Symbols: | myb-like transcription factor family ... 161 1e-38 > AT1G13300.1 | Symbols: HRS1 | myb-like transcription factor family protein | chr1:4556892-4558708 FORWARD LENGTH=1237 Length=1237 Score = 1692 bits (916), Expect = 0.0 Identities = 1031/1085 (95%), Gaps = 13/1085 (1%) Strand=Plus/Plus Query 1 TAAGTCCCTAAAGCATCATCATGATTAAAAAGTTCAGCAATATGGATTACAACCAGAAAC 60 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 66 TAAGTCCCTAAAGTATCATCATGATTAAAAAGTTCAGCAATATGGATTACAACCAGAAAC 125 Query 61 GGGAGAGATGTGGGAAATACATCGAAGCCCTCGAAGAGGAACGTCGAAAGATTCATGTAT 120 | |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 126 GAGAGAGATGTGGGCAATACATCGAAGCCCTCGAAGAGGAACGTCGCAAGATTCATGTAT 185 Query 121 TTCAACGTGAACTTCCTCTTTGCTTAGACCTTGTAACTCAAGCCATCGAGGCATGTAAAA 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct 186 TTCAACGTGAACTTCCTCTTTGCTTAGACCTTGTAACTCAAGCGATCGAGGCATGTAAGA 245 Query 181 GGGAGATACCGGAGATGACGACGGATAATGTGTACGGACAACCAGAGTGCTCGGAGCAGA 240 ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct 246 GGGAGTTACCGGAGATGACGACGGAGAATATGTACGGACAACCAGAGTGCTCGGAGCAGA 305 Query 241 CGACCGGAGAATGTGGGCCGGTCTTGGAGCAGTTTCTAACAATTAAAGATTCATCGACCT 300 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct 306 CGACCGGAGAATGTGGGCCGGTCTTGGAGCAGTTTCTAACTATTAAAGATTCATCGACAT 365 Query 301 CCAACGAAGAAGTAGATGAAGAGTTCGACGATGAGCACGGAAATCACGATCCGGACAATG 360 |||||||||||| ||||||||| |||||||||||||| |||||||||||||| ||||||| Sbjct 366 CCAACGAAGAAGAAGATGAAGAATTCGACGATGAGCATGGAAATCACGATCCAGACAATG 425 Query 361 GCTCCGAGGACAAGAACACGAAATCTGATTGGCTTAAGTCTGTTCAACTGTGGAACCAAC 420 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct 426 ATTCCGAGGACAAGAACACGAAATCTGATTGGCTTAAGTCTGTTCAACTCTGGAATCAAC 485 Query 421 CCGACCA---TCTTCTTCCAAAAGAGGAACGGTTGCAGCAGGAGACGATGGAGACGGTGA 477 ||||||| |||||||||||||||||| |||||||||||||||| || ||| Sbjct 486 CCGACCACCCACTTCTTCCAAAAGAGGAAAGGTTGCAGCAGGAGAC------GA---TGA 536 Query 478 CAAGAGACGAGAGTATGAGAAAGGATCCGATGGTGAACGGTTGCgaaggaaggaagagag 537 ||||||| |||||||||||||| |||||||||||||||||| ||||||| |||||||||| Sbjct 537 CAAGAGATGAGAGTATGAGAAAAGATCCGATGGTGAACGGTGGCGAAGGGAGGAAGAGAG 596 Query 538 aggcggagaaagacggaggaggagggagaaagcaaagaaggTGTTGGTCATCGCAGTTGC 597 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct 597 AGGCGGAGAAAGACGGAGGAGGAGGGAGAAAGCAAAGAAGGTGTTGGTCGTCGCAATTGC 656 Query 598 ATAGACGCTTCTTGAACGCTCTTCAACACTTAGGTGGACCTCATGTAGCTACGCCAAAGC 657 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 657 ATAGACGCTTCTTGAACGCTCTTCAACACTTAGGTGGACCTCATGTAGCTACGCCAAAGC 716 Query 658 AAATCAGGGAGTTAATGAAAGTTGATGGATTAACCAATGATGAAGTTAAAAGCCATTTAC 717 ||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct 717 AAATCAGGGAGTTTATGAAGGTTGATGGGTTAACCAATGATGAAGTTAAAAGCCATTTAC 776 Query 718 AGAAATATAGACTGCATACAAGAAGGCCACGCCAAACAGTCCCTAACAACGGAAACTCTC 777 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 777 AGAAATATAGACTGCATACAAGAAGGCCACGCCAAACAGTCCCTAACAACGGAAACTCTC 836 Query 778 AAACGCAACATTTCGTAGTCGTCGGAGGTTTATGGGTCCCACAATCGGACTACTCTACGG 837 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct 837 AAACGCAACATTTCGTAGTCGTCGGTGGTTTATGGGTACCACAATCGGACTACTCTACGG 896 Query 838 GCAAGaccaccggaggagccaccaccagcagtaccaccaccaccaccGGGATCTATGGAG 897 ||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct 897 GCAAGACTACCGGAGGAGCCACCACCAGCAGTACCACCACAACCACCGGCATCTATGGAA 956 Query 898 CCATGGCAGCACCGCCACCTCCACAATGGCCTAGCCATTCCAATTTTAGGCCGTCGATTA 957 ||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||| Sbjct 957 CCATGGCCGCACCGCCACCTCCACAATGGCCTAGCCATTCCAATTATAGACCGTCGATTA 1016 Query 958 TTGTGGAAGAAGGATCGGGAAGTCATAGTGAAGGGGTTGTGGTCCGGTGTAGCTCGCCGG 1017 ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1017 TTGTGGACGAAGGATCGGGAAGTCATAGTGAAGGGGTCGTGGTCCGGTGTAGCTCGCCGG 1076 Query 1018 CGATGTCTTCTTCTACCCGTAATCATTACGTCAAGAATAATTAATTTGTTTTTACTGT-C 1076 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1077 CGATGTCTTCTTCTACCCGTAATCATTACGTCAAGAATAATTAATTTGTTTTTACTGTAC 1136 Query 1077 TCTAA 1081 ||||| Sbjct 1137 TCTAA 1141 > AT1G68670.1 | Symbols: | myb-like transcription factor family protein | chr1:25782029-25784076 FORWARD LENGTH=1583 Length=1583 Score = 161 bits (87), Expect = 1e-38 Identities = 153/185 (83%), Gaps = 4/185 (2%) Strand=Plus/Plus Query 564 agaaagcaaagaaggTGTTGGTCATCGCAGTTGCATAGACGCTTCTTGAACGCTCTTCAA 623 ||||| ||||| |||| ||||| || | || || | || ||| | ||||| ||||| Sbjct 955 AGAAAACAAAGGCGGTGCTGGTCGCCGGAATTACACCGTCGATTCCTAAACGCGCTTCAG 1014 Query 624 CA-CTTAGGTGGACCTCATGTAGCTACGCCAAAGCAAATCAGGGAGTTA-ATGAAAGTTG 681 || ||| || ||| ||||||| ||||| ||||||||||||||||| | | ||||| |||| Sbjct 1015 CAGCTT-GGAGGATCTCATGTTGCTACACCAAAGCAAATCAGGGA-TCACATGAAGGTTG 1072 Query 682 ATGGATTAACCAATGATGAAGTTAAAAGCCATTTACAGAAATATAGACTGCATACAAGAA 741 |||||||||| || || |||||||||||||||||||||||||||||||| || ||||||| Sbjct 1073 ATGGATTAACAAACGACGAAGTTAAAAGCCATTTACAGAAATATAGACTTCACACAAGAA 1132 Query 742 GGCCA 746 ||||| Sbjct 1133 GGCCA 1137 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 52961574975 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5