BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg920212
Length=1804
Score E
Sequences producing significant alignments: (Bits) Value
AT1G13320.1 | Symbols: PP2AA3 | protein phosphatase 2A subunit... 3066 0.0
AT3G25800.1 | Symbols: PDF1, PR 65, PP2AA2 | protein phosphatas... 1962 0.0
AT1G25490.1 | Symbols: RCN1, REGA, ATB BETA BETA, EER1 | ARM re... 1147 0.0
> AT1G13320.1 | Symbols: PP2AA3 | protein phosphatase 2A subunit
A3 | chr1:4563476-4567750 REVERSE LENGTH=2070
Length=2070
Score = 3066 bits (1660), Expect = 0.0
Identities = 1746/1789 (98%), Gaps = 0/1789 (0%)
Strand=Plus/Plus
Query 1 TGATTTGAGTTTTGGTCAGGATGTCTATGGTTGATGAGCCTTTATACCCGATTGCCGTGC 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct 71 TGATTTGAGTTTTGGTGAGGATGTCTATGGTTGATGAGCCTTTATACCCGATTGCTGTGC 130
Query 61 TTATCGACGAGCTAAAAAACGATGATATTCAGCTTAGATTGAACTCTATTAGACGGCTTT 120
||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 131 TTATCGACGAGCTAAAAAACGATGATATTCAGCGTAGATTGAACTCTATTAAACGGCTTT 190
Query 121 CTATCATTGCTCGTGCTCTTGGAGAGGAGAGGACAAGGAAAGAGTTGATTCCGTTTCTTA 180
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 191 CTATCATTGCTCGTGCTCTTGGAGAGGAGAGGACAAGAAAAGAGTTGATTCCATTTCTTA 250
Query 181 GTGAGAACAATGACGATGATGATGAGGTGCTTTTGGCTATGGCGGAAGAGTTGGGGGTTT 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct 251 GTGAGAACAATGACGATGACGATGAGGTGCTTTTGGCTATGGCGGAAGAGTTGGGGGGTT 310
Query 241 TTATTCCGTATGTAGGAGGGGTTGAGTATGCACATGTTTTGCTTCCACCTTTGGAGACTC 300
|||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct 311 TTATTCTGTATGTAGGAGGGGTTGAGTATGCATATGTTCTGCTTCCACCTTTGGAGACTC 370
Query 301 TCGCGAGTGTTGAGGAAACTTGCGTGAGGGAAAAAGCTGTAGATTCACTTTGCAGAATTG 360
| | | |||||||||||||||||||||||| |||||||| ||||||||||| |||||||
Sbjct 371 TATCCACTGTTGAGGAAACTTGCGTGAGGGAGAAAGCTGTGGATTCACTTTGTAGAATTG 430
Query 361 GTGCTCAGATGAGGGAGAATGACTTGGTTGAGCATTTCACTCCTCTGGCTAAGCGACTTT 420
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 431 GTGCTCAGATGAGGGAGAGTGACTTGGTTGAGCATTTCACTCCTCTGGCTAAGCGACTTT 490
Query 421 CAGCTGGTGAATGGTTCACAGCCAGAGTATCAGCATGTGGGATTTTCCATATTGCATACC 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 491 CAGCTGGTGAATGGTTCACAGCCAGAGTATCAGCATGTGGGATTTTCCATATTGCATACC 550
Query 481 CAAGTGCCCCAGATCCGCTAAAGACGGAGCTAAGATCAATATATGGTCAGCTTTGTCAAG 540
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 551 CAAGTGCCCCAGATGTGCTAAAGACGGAGCTAAGATCAATATATGGTCAGCTTTGTCAAG 610
Query 541 ATGACATGCCAATGGTGCGCAGAGCTGCAGCAACCAATTTGGGGAAGTTTGCTGCTACCA 600
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct 611 ATGACATGCCAATGGTGCGCAGAGCTGCAGCAACTAATTTGGGGAAGTTTGCTGCTACAA 670
Query 601 TTGAATCAGCTCATTTGAAGACAGACATTATGTCCATGTTTGAGGATCTTACGCAAGATG 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 671 TTGAATCAGCTCATTTGAAGACAGACATTATGTCCATGTTTGAGGATCTTACGCAAGATG 730
Query 661 ATCAAGATTCGGTTAGATTATTGGCTGTTGAGGGTTGTGCTGCTCTTGGGAAATTGTTGG 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 731 ATCAAGATTCGGTTAGATTATTGGCTGTTGAGGGTTGTGCTGCTCTTGGGAAATTGTTGG 790
Query 721 AGCCCCAGGACTGTGTCGCACACATTCTTCCTGTGATTGTGACTTTCTCGCAGGATAAGT 780
|||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||
Sbjct 791 AGCCCCAGGACTGTGTTGCACACATTCTTCCTGTGATTGTCAATTTCTCGCAGGATAAGT 850
Query 781 CCTGGCGTGTGCGTTATATGGTTGCAAATCAGCTCTATGAACTTTGTGAAGCTGTAGGAC 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 851 CCTGGCGTGTGCGTTATATGGTTGCAAATCAGCTCTATGAACTTTGTGAAGCTGTAGGAC 910
Query 841 CGGAGCCAACTAGGACGGATCTGGTGCCTGCATATGCTCGTCTACTTCGTGATAATGAGG 900
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 911 CGGAGCCAACTAGGACGGATCTGGTGCCTGCATATGCTCGTCTACTTTGTGATAATGAGG 970
Query 901 CTGAAGTTCGGATAGCAGCTGCTGGAAAAGTTACCAAGTTTTGTCGCATTTTAAACCCTG 960
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 971 CAGAAGTTCGGATAGCAGCTGCTGGAAAAGTTACCAAGTTTTGTCGCATTTTAAACCCTG 1030
Query 961 AACTCGCTATCCAGCACATTCTTCCCTGTGTAAAGGAATTATCATCAGACTCTTCTCAGC 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1031 AACTCGCTATCCAGCACATTCTTCCCTGTGTAAAGGAATTATCATCAGACTCTTCTCAGC 1090
Query 1021 ACGTCAGATCTGCATTGGCATCAGTTATAATGGGAATGGCTCCAGTCTTGGGTAAGGATG 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1091 ACGTCAGATCTGCATTGGCATCAGTTATAATGGGAATGGCTCCAGTCTTGGGTAAGGATG 1150
Query 1081 CAACAATTGAGCATCTTCTTCCAATCTTTCTTTCTCTATTGAAAGACGAATTTCCTGATG 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1151 CAACAATTGAGCATCTTCTTCCAATCTTTCTTTCTCTATTGAAAGACGAATTTCCTGATG 1210
Query 1141 TACGCTTAAACATTATCAGCAAACTTGACCAAGTGAACCAGGTTATTGGGATTGATCTGC 1200
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1211 TACGCTTAAACATTATCAGCAAACTTGACCAAGTGAACCAGGTTATTGGGATTGATCTAC 1270
Query 1201 TATCGCAATCATTACTACCAGCCATTGTAGAACTTGCTGAAGACAGGCACTGGAGAGTAC 1260
|||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1271 TATCACAATCGTTACTGCCAGCCATTGTAGAACTTGCTGAAGACAGGCACTGGAGAGTAC 1330
Query 1261 GTCTGGCTATAATAGAGTATATTCCCTTGTTGGCCAGTCAATTAGGTGTAGGCTTCTTTG 1320
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1331 GTCTGGCTATAATCGAGTATATTCCCTTGTTGGCCAGTCAATTAGGTGTAGGCTTCTTTG 1390
Query 1321 ATGATAAGCTTGGTGCTCTTTGCATGCAATGGTTACAAGACAAGGTTCACTCAATCCGTG 1380
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1391 ATGAGAAGCTTGGTGCTCTTTGCATGCAATGGTTACAAGACAAGGTTCACTCAATCCGTG 1450
Query 1381 AAGCTGCTGCAAACAATCTTAAGCGTCTTGCTGAAGAGTTTGGTCCTGAATGGGCAATGC 1440
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1451 AAGCTGCTGCAAACAATCTGAAGCGTCTTGCTGAAGAGTTTGGTCCTGAATGGGCAATGC 1510
Query 1441 AGCATATAGTTCCTCAGGTTCTAGAGATGATTAACAACCCACACTATCTATATCGGATGA 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1511 AGCATATAGTTCCTCAGGTTCTAGAGATGATTAACAACCCACACTATCTATATCGGATGA 1570
Query 1501 CAATTCTTCGTGCAGTATCGCTTCTCGCTCCAGTAATGGGATCCGAGATCACATGTTCCA 1560
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1571 CGATTCTTCGTGCAGTATCGCTTCTCGCTCCAGTAATGGGATCCGAGATCACATGTTCCA 1630
Query 1561 AACTCTTGCCTGCGGTGATAACTGCATCTAAAGACAGAGTTCCAAACATCAAATTTAATG 1620
||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1631 AACTCTTACCTGCGGTAATAACTGCATCTAAAGACAGAGTTCCAAACATCAAATTTAACG 1690
Query 1621 TGGCCAAAATGATGCAATCTCTCATTCCGATAGTCGACCAAGCGGTTGTGGAGAACATGA 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1691 TGGCCAAAATGATGCAATCTCTCATTCCGATAGTCGACCAAGCGGTTGTGGAGAACATGA 1750
Query 1681 TACGGCCATGCTTGGTGGAGCTAAGTGAAGACCCGGACGTTGATGTTCGTTTTTTCGCAA 1740
|||||||||||||||||||||||||||||||||| || ||||||||||| | ||||||||
Sbjct 1751 TACGGCCATGCTTGGTGGAGCTAAGTGAAGACCCAGATGTTGATGTTCGGTATTTCGCAA 1810
Query 1741 ATCAAGCTCTCCAATCTATTGACAATGTGATGATGTCTAGCTaaaaaaa 1789
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1811 ATCAAGCTCTCCAATCTATTGACAATGTGATGATGTCTAGCTAAAAAAA 1859
> AT3G25800.1 | Symbols: PDF1, PR 65, PP2AA2 | protein phosphatase
2A subunit A2 | chr3:9422588-9426044 REVERSE LENGTH=2097
Length=2097
Score = 1962 bits (1062), Expect = 0.0
Identities = 1549/1784 (87%), Gaps = 34/1784 (2%)
Strand=Plus/Plus
Query 20 GATGTCTATGGTTGATGAGCCTTTATACCCGATTGCCGTGCTTATCGACGAGCTAAAAAA 79
|||||||||| | |||||||| || ||||| || ||||| ||||| |||||| |||||||
Sbjct 99 GATGTCTATGATCGATGAGCCGTTGTACCCAATCGCCGTACTTATAGACGAGTTAAAAAA 158
Query 80 CGATGATATTCAGCTTAGATTGAACTCTATTAGACGGCTTTCTATC-ATTGCTCGTGCTC 138
||||||||||||||| |||||||| || || ||| ||||||||| | || ||||||||||
Sbjct 159 CGATGATATTCAGCTAAGATTGAATTCCATCAGAAGGCTTTCTA-CGATCGCTCGTGCTC 217
Query 139 TTGGAGAGGAGAGGACAAGGAAA-GAGTTGATTCCGTTT-CTTAGTGAGAACAATGACGA 196
|||| || |||||||| | |||| || |||| ||| ||| ||||| || |||||||||||
Sbjct 218 TTGGGGAAGAGAGGACTA-GAAAGGAATTGA-TCCCTTTCCTTAGCGAAAACAATGACGA 275
Query 197 TGATGATGAGGTGCTT-TTGGCTATGGCGGAAGAGTTGGGGGTTTTTATTCCGTATGTAG 255
|||||||||||| || || || ||||| ||||| ||||| || |||||||| ||||| |
Sbjct 276 TGATGATGAGGT-TTTATTAGCAATGGCTGAAGAATTGGGTGTGTTTATTCCTTATGTTG 334
Query 256 GAGGGGTTGAGTATGCACATGTT-TTGCTTCCACCTTTGGAGACTCTCGCGAGTGTTGAG 314
| || |||||||||||||||||| || |||||||||||||| ||||| ||| ||| ||
Sbjct 335 GTGGTGTTGAGTATGCACATGTTCTT-CTTCCACCTTTGGAAACTCTTTCGACTGTCGAA 393
Query 315 GAAACTTGCGTGAGGGAAAAAGCTGTAGATTCACTTTGCAGAATTGG-TGCTCAGATGAG 373
|||||||| || ||||| |||||||| || || ||||| ||| |||| | ||||||||||
Sbjct 394 GAAACTTGTGTTAGGGAGAAAGCTGTTGAGTCGCTTTGTAGAGTTGGCT-CTCAGATGAG 452
Query 374 GGAGAATGACTTGGTTGAGCATTTCA-CTCCTCTGGCTAAGCGACTTTCAGCTGGTGAAT 432
||||| |||||||||||| ||||||| || | | | |||||||||| | |||||||| |
Sbjct 453 GGAGAGTGACTTGGTTGATCATTTCATTTCGT-TAGTTAAGCGACTTGCCGCTGGTGAGT 511
Query 433 GGTTCACAGCCAGAGTATCAGCATGTGG-GATTTTCCATATTGCATACCCAAGTGCCCCA 491
|||||||||| |||||||| || || || | ||||||||||||||||||| || || ||
Sbjct 512 GGTTCACAGCTAGAGTATCGGCTTGCGGTG-TTTTCCATATTGCATACCCGAGCGCGCCG 570
Query 492 GATCCGCTAAAGACGGAGCTAAGATCAATATATGGTCAGCTTTGTCAAGATGACATGCCA 551
||| | | ||||| ||| ||||||| | ||| |||||||||||| ||||| |||||
Sbjct 571 GATATGTTGAAGACTGAGTTAAGATCGTTGTATACTCAGCTTTGTCAGGATGATATGCCG 630
Query 552 ATGGTGCGCAGAGCTGCAGCAACCAAT-TTGGGGAAGTTTGCTGCTACCATTGAATCAGC 610
||||| | |||||||||||||| ||| || ||||| ||||||||||| ||||||||||
Sbjct 631 ATGGTAAGGAGAGCTGCAGCAACTAATCTT-GGGAAATTTGCTGCTACGGTTGAATCAGC 689
Query 611 TCATTTGAAGACAGACATTATGTCCATGTTTGAGGATCTTACGCAAGATGATCAAGATTC 670
||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||
Sbjct 690 GCATTTGAAGACCGACGTTATGTCCATGTTTGAGGATCTTACTCAAGATGATCAAGATTC 749
Query 671 GGTTAGATTATTGGCTGTTGAGGGTTGTGCTGCTCTTGGGAAATTGTTGGAGCCCCAGGA 730
|||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 750 TGTTAGATTATTGGCCGTTGAGGGTTGTGCTGCTCTTGGGAAATTGTTGGAGCCTCAGGA 809
Query 731 CTGTGTCGC-ACACATTCTTCCTGTGATTGTGACTTTCTCGCAGGATAAGTCCTGGCGTG 789
|||||| | |||||||||||| |||||||| | |||||||||||||||||| |||||||
Sbjct 810 TTGTGTC-CAACACATTCTTCCCGTGATTGTTAATTTCTCGCAGGATAAGTCTTGGCGTG 868
Query 790 TGCGTTATATGGTTGCAAATCAGCTCTATGAACTTTGTGAAGCTGTAGGACCGGAGCCAA 849
|||| ||||||||||||||||| ||||| || ||||||||||| || ||||| ||||| |
Sbjct 869 TGCGCTATATGGTTGCAAATCAACTCTACGAGCTTTGTGAAGCCGTGGGACCTGAGCCTA 928
Query 850 CTAGGACGGATCTGGTGCCTGCATATGCT-CGTCTACTTCGTGATAATGAGGCTGAAGTT 908
|||||||||| |||||||||||||||| | || ||||||||||||||||| ||||||||
Sbjct 929 CTAGGACGGAGCTGGTGCCTGCATATG-TGCGCCTACTTCGTGATAATGAAGCTGAAGTA 987
Query 909 CGGATAGCAGCTGCTGGAAAAGTTACCAAGTTTTGTCGCATTTTAAACCCTGAACTCGCT 968
|| ||||||||||| ||||||||||| ||||||||||| ||| ||||||||||| | |||
Sbjct 988 CGCATAGCAGCTGCCGGAAAAGTTACAAAGTTTTGTCGGATTCTAAACCCTGAAATTGCT 1047
Query 969 ATCCAGCACATTCTTCCCTGTGTAAAGGAATTATCATCAGACTCTTCTCAGCACGTCAGA 1028
|||||||||||||| |||||||| ||||| |||||||||||||||||||||| ||||||
Sbjct 1048 ATCCAGCACATTCTCCCCTGTGTGAAGGAGCTATCATCAGACTCTTCTCAGCATGTCAGA 1107
Query 1029 TCTGCATTGGCATCAGTTATAATGGGAATGGCTCCAGTCTTGGGTAAGGATGCAACAATT 1088
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1108 TCTGCATTGGCCTCAGTTATAATGGGAATGGCTCCAGTCTTGGGTAAGGATGCAACAATT 1167
Query 1089 GAGCATCTTCTTCCAATCTTTCTTTCTCTATTGAAAGACGAATTTCCTGATGTACGCTTA 1148
|||||||| ||||||||||||||||||||||||||||| || || || |||||||||||
Sbjct 1168 GAGCATCTCCTTCCAATCTTTCTTTCTCTATTGAAAGATGAGTTCCCGGATGTACGCTTG 1227
Query 1149 AACATTATCAGCAAACTTGACCAAGTGAACCAGGTTATTGGGATTGATCTGCTATCGCAA 1208
||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||
Sbjct 1228 AACATTATCAGCAAACTTGACCAAGTGAATCAGGTTATTGGGATTGATCTACTATCACAA 1287
Query 1209 TCATTACTACCAGCCATTGTAGAACTTGCTGAAGACAGGCACTGGAGAGTACGTCTGGCT 1268
|| || | ||||| |||||||||||||||||||| || |||||||||||| | || |||
Sbjct 1288 TCCTTGTTGCCAGCTATTGTAGAACTTGCTGAAGATAGACACTGGAGAGTAAGACTTGCT 1347
Query 1269 ATAATAGAGTATATTCCCTT-GTTGGCCAGTCAATTAGGTGTAGGCTTCTTTGATGATAA 1327
||||| |||||||| ||||| |||||| ||||| |||||||| ||||||||||| |||||
Sbjct 1348 ATAATCGAGTATAT-CCCTTTGTTGGCAAGTCAGTTAGGTGTTGGCTTCTTTGACGATAA 1406
Query 1328 GCTTGGTGCTCTTTGCATGCAATGGTTACAAGACAAGGTTCACTCAATCCGTGAAGCTGC 1387
||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct 1407 GCTTGGTGCTCTTTGCATGCAATGGTTACAAGACAAGGTTCACTCAATCCGCGATGCTGC 1466
Query 1388 TGCAAACAATCTTAAGCGTCTTGCTGAAGAGTTTGGTCCTGAATGGGCAATGCAGCATAT 1447
||| |||||||| ||||| |||||||| || ||||||||||||||||||||||| |||||
Sbjct 1467 TGCTAACAATCTCAAGCGGCTTGCTGAGGAATTTGGTCCTGAATGGGCAATGCAACATAT 1526
Query 1448 AGTTCCTCAGGTTCTAGAGATGATTAACAACCCACACTATCTATATCGGATGACAATTCT 1507
||||||||||||||| |||||| |||||||||| |||||||| || || ||||| ||| |
Sbjct 1527 AGTTCCTCAGGTTCTTGAGATGGTTAACAACCCTCACTATCTCTACCGAATGACCATT-T 1585
Query 1508 T-CGTGCAGTATCGCTTCTCGCTCCAGTAATGGGATCCGAGATCACATGTTCCAAACTCT 1566
| ||||| || || ||||| || || |||||||| || ||||| ||||| || || ||||
Sbjct 1586 TGCGTGCGGTGTCTCTTCTTGCACCTGTAATGGGCTCAGAGATTACATGCTCTAAGCTCT 1645
Query 1567 TGCCTGCGGTGATAACTGCATCTAAAGACAGAGTTCCAAACATCAAATTTAATGTGGCCA 1626
| |||| || || ||||||||||||||||||||||||||||||||||| || || || |
Sbjct 1646 TACCTGTAGTAATGACTGCATCTAAAGACAGAGTTCCAAACATCAAATTCAACGTCGCTA 1705
Query 1627 AAATGA-TGCAATCTCTCATTCCGATAGTCGACCAAGCGGTTGTGGAGAACATGATACGG 1685
|| | | | ||||| |||||||| ||||| || ||| ||||||||||||| | ||| ||
Sbjct 1706 AAGT-ACTTCAATCCCTCATTCCAATAGTTGATCAATCGGTTGTGGAGAAGACGATTCGT 1764
Query 1686 CCATG--CTTGGTGGAGCTAAGTGAAGACCCGGACGTTGATGTTC-GTTTTTTCGCAAAT 1742
|| || |||| |||||||||| || || || || |||||||| | | |||||||||||
Sbjct 1765 CC-TGGGCTTG-TGGAGCTAAGCGAGGATCCAGATGTTGATGT-CAGGTTTTTCGCAAAC 1821
Query 1743 CAAGCTCTCCAATCTATTGACAATGTGATGATGTCTAGCTaaaa 1786
|||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1822 CAAGCTCTACAATCTATTGACAATGTGATGATGTCTAGCTAAAA 1865
> AT1G25490.1 | Symbols: RCN1, REGA, ATB BETA BETA, EER1 | ARM
repeat superfamily protein | chr1:8951202-8955107 FORWARD LENGTH=2110
Length=2110
Score = 1147 bits (621), Expect = 0.0
Identities = 1410/1779 (79%), Gaps = 102/1779 (6%)
Strand=Plus/Plus
Query 20 GATGTCTATGGTTGATGAGCC-TT-TATACCCGATTGCCGTGCTTATCGACGAGCTAAAA 77
|||| ||||||| ||||| || || ||| ||| ||||| |||||||| || ||||| ||
Sbjct 135 GATGGCTATGGTAGATGAACCGTTGTAT-CCC-ATTGCTGTGCTTATAGATGAGCTTAAG 192
Query 78 AACGATGATATTCAGCTTAGATTGAACTCTATTAGACGGCTT-TCTATC-ATTGCTCGTG 135
|| ||||||||||||||| | |||||||| || | | |||| |||| | || |||||||
Sbjct 193 AATGATGATATTCAGCTTCGTTTGAACTCGATCCGTC-GCTTATCTA-CTATAGCTCGTG 250
Query 136 CTCTTGGAGAGGAGAGGACAAGGAAAGAGTTGATTCCGTTTCTT-AGTGAGAACAATGAC 194
|||||||||||||| | |||||||| ||||| | ||| ||| || |||||||| | ||||
Sbjct 251 CTCTTGGAGAGGAGCGTACAAGGAAGGAGTT-AATCCCTTTTTTGAGTGAGAATAGTGAC 309
Query 195 GATGATGATGAGGTGCTT-TTGGCTATGGCGGAAGAGTTGGGGGTTTTTATTCCGTATGT 253
||||| |||||||||||| || || ||||| || ||||| || ||||||||||||| |||
Sbjct 310 GATGACGATGAGGTGCTTCTT-GCAATGGCTGAGGAGTTAGGAGTTTTTATTCCGTTTGT 368
Query 254 AGGAGGGGTTGAGTATGCACATGTT-TTGCTTCCACCTTTGGAGACTCTC-GCG-AGTGT 310
||||| |||||| ||| |||||| || ||||| |||||||| | |||| | | |||
Sbjct 369 TGGAGGAATTGAGTTTGCGCATGTTCTT-CTTCCTCCTTTGGA-A-TCTCTATGTACTGT 425
Query 311 TGAGGAAACTTGCGTGAGGGAAAAAGCTGTAGATTCACTTTG-CAGAATTGG-TGCTCAG 368
||| || ||||| ||||| ||||||||||| || || ||||| || ||||| | |||||
Sbjct 426 TGAAGAGACTTGTGTGAGAGAAAAAGCTGTGGAATCGCTTTGTAAG-ATTGGAT-CTCAG 483
Query 369 ATGAGGGAGAATGA-CTTGGTTG-AGCATTTCACTCCTCTGGCT-AAGCGACTT-TCAGC 424
|||| |||||||| ||| |||| | | ||| |||||| | | ||| | || | |
Sbjct 484 ATGAAAGAGAATGATCTT-GTTGAATC-TTTTGTTCCTCTTG-TGAAGAG-GTTAGCGGG 539
Query 425 TGGTGAATGGTTCACAGCCAGAGTATCAGCATGTGGGAT-TTTCCATATTGCATACCCAA 483
|||||||||||| |||| ||||| || |||||||| || ||| ||| ||||||| ||||
Sbjct 540 TGGTGAATGGTTTGCAGCAAGAGTTTCTGCATGTGGTATATTT-CATGTTGCATA-CCAA 597
Query 484 -G-TGCCCCAGATCCGCTAAAGACGGAGCTAAGATC-AATATATGGTCAGCTTTGT-C-A 538
| || | | ||| | | ||||| ||| || | | | | ||| | ||| |||| | |
Sbjct 598 GGTTG-CACTGATGTGTTGAAGACTGAGTTACGGGCTACT-TATAGCCAG--TTGTGCAA 653
Query 539 AGATGACATGCCAATGGTGCGCAGAGCTGCAGCAACCAATTTGGGGAAGTTTGCTGCTAC 598
|||||| |||||||||||||| |||||||| ||| | || ||||||| |||||| | ||
Sbjct 654 AGATGATATGCCAATGGTGCGAAGAGCTGCTGCATCTAACCTGGGGAAATTTGCTACAAC 713
Query 599 CATTGAATC-AGCTCATTTGA-AGACAGACATTATGTCCATGTTTGAGGATCTTACGCAA 656
| || || | || ||||| | | || || ||| | ||||| || |||||||| ||
Sbjct 714 TGTCGAGTCTACCT-TTTTGATTG-CTGAGATCATGACTATGTTCGATGATCTTACTAAA 771
Query 657 GATGATCAAGATTCGGTTAGATTATTGGCTGTTG-AGGGTTGTGCTGCTCTTGGGAAA-T 714
||||| |||||||| || ||| |||||||||||| |||| ||||| |||||| ||||| |
Sbjct 772 GATGACCAAGATTCTGTGAGACTATTGGCTGTTGAAGGG-TGTGCAGCTCTT-GGAAAGT 829
Query 715 TGTTGGAGCCCCAGGACTGTGTCGCACACATTCTT-CCTGTGATTGTGACTTTCTCGCAG 773
||||||| || ||||| ||||| |||| |||| || ||||| ||||| | |||||| |||
Sbjct 830 TGTTGGAACCTCAGGATTGTGTTGCACGCATT-TTACCTGTTATTGTTAATTTCTCTCAG 888
Query 774 GATAAGTCCTGGCGTGTGCGTTATATGGTTGCAAATCAGCTCTATGAACTTTGTGAAGCT 833
||||| || ||| | ||||| || |||||||| |||||||| |||||||||||||| ||
Sbjct 889 GATAAATCTTGGAGGGTGCGCTACATGGTTGCTAATCAGCTATATGAACTTTGTGAGGCA 948
Query 834 GTAGGACCGGA--GCCAACTAGGACGGATCTGGTGCCTGCATATGCT-CG-TCTACTTCG 889
|| || || || | | || ||||||||| |||| || ||||||| | | | | || |
Sbjct 949 GTGGGTCCTGATTG-C-ACGAGGACGGATTTGGTTCCAGCATATG-TGAGAT-TGCTAAG 1004
Query 890 TGATAATGAGGCTGAAGTTCGGATAGCAGCTGCTGGAAAAGTTACCAAGTTTTGTC-GCA 948
|| |||||||||||||| || |||||||| || |||||||| |||||||| |||| ||
Sbjct 1005 GGACAATGAGGCTGAAGTGCGAATAGCAGCAGCGGGAAAAGTGACCAAGTTCTGTCGGC- 1063
Query 949 TTTTAAACCCTGAACTCGCTATCCAGCACATTCTTCCCTGTGTAAAGGAATTATCATCAG 1008
|||| || || || || || || |||||||| ||||| ||||| |||||||||||||| |
Sbjct 1064 TTTTGAATCCAGAGCTTGCGATTCAGCACATCCTTCCTTGTGTGAAGGAATTATCATCGG 1123
Query 1009 ACTCTTCTCAGCACGTCAGATCTGCAT-TGGCATCAGTTATAATGGGAATGGCTCC-AGT 1066
| |||||||| || ||| | ||||| | | || ||||| |||||||| |||||||| | |
Sbjct 1124 ATTCTTCTCAACATGTCCGCTCTGC-TCTAGCTTCAGTAATAATGGGGATGGCTCCTA-T 1181
Query 1067 -CTTGGGTAAGGA-TGCAACAATTGAGCATCTTCTT-CCAATCTTTCTTTCTCTATTGAA 1123
|||||| ||||| | |||| |||||||||| | || ||||| |||||||| || |||||
Sbjct 1182 CCTTGGG-AAGGACT-CAACCATTGAGCATC-TGTTACCAATTTTTCTTTCCCTTTTGAA 1238
Query 1124 AGACGAATTTCCTGATGTACG-CTTAAACATTATCAGCAAACTT-GACCAAGTGAACCAG 1181
||| |||||||||||||| || ||| ||||| || ||| || || || ||||| ||||||
Sbjct 1239 AGATGAATTTCCTGATGTGCGCCTT-AACATCATAAGC-AAGTTAGATCAAGTCAACCAG 1296
Query 1182 GTTATTGGGATTGATCTGCTATCGCAATCATTACTACCAGCCATTGTAGAACTTGCTGAA 1241
|||||||| |||||||| ||||| ||||| || |||| ||||||||||||||||||||
Sbjct 1297 GTTATTGGAATTGATCTACTATCTCAATCCTTGTTACCGGCCATTGTAGAACTTGCTGAG 1356
Query 1242 GA-CAGGCACTGGAGAGTACGTCTGGCTATAATAGAGTATATTCC-CTTGTTGGCCAGTC 1299
|| | ||||||||||||| || || || |||||||||||| |||| | |||||||||| |
Sbjct 1357 GATC-GGCACTGGAGAGTCCGACTTGCAATAATAGAGTATGTTCCAC-TGTTGGCCAGCC 1414
Query 1300 AATTAGGTGTAGGCTTCTTT-GATGATAAGCTTGGTGCTCTTTGCATGCAATGGTTACAA 1358
| |||||| |||| || ||| ||||| ||||| || || ||||||||||||||| | |||
Sbjct 1415 AGTTAGGTATAGGATT-TTTCGATGACAAGCTCGGAGCCCTTTGCATGCAATGGCTGCAA 1473
Query 1359 GACAAGGTTC-ACTCAATCCGTGAAGCTGCTGCAAACAATCTTAAGCGTCTTGCTGAAGA 1417
||||||| || |||| ||||| |||||||| |||||||| || ||||| || || || ||
Sbjct 1474 GACAAGG-TCTACTCTATCCGCGAAGCTGCAGCAAACAACCTAAAGCGCCTCGCAGAGGA 1532
Query 1418 GTTTGGTCCTGAATGGGCAATGCAGCA-TATAGTTCCTCAGGT-TCTAGAGATGATTAAC 1475
||||||||||||||||||||||||||| | ||||||| ||||| | | || ||| | |||
Sbjct 1533 GTTTGGTCCTGAATGGGCAATGCAGCACT-TAGTTCCCCAGGTAT-TGGACATGGTCAAC 1590
Query 1476 AACCCACACTATCTATATC-GGATGACAATTCTTCGTGCAGTATCGCTTC-TCGCTCCAG 1533
|| || ||||| ||| | | |||||| |||| || ||| |||| || | | || || |
Sbjct 1591 AATCCGCACTACCTACA-CAGGATGATGGTTCTACGCGCAATATCTCT-CATGGCGCCTG 1648
Query 1534 TAATGGGATCCGAGATCACATGTTCCAAACT-CTTGCCTGCGGT-GAT-AACTGCATCTA 1590
|||||||||| || |||||||| || || | ||| |||| ||| | | || ||||| |
Sbjct 1649 TAATGGGATCAGAAATCACATGCTCTAAGTTTCTT-CCTGTGGTTGTTGAA--GCATCAA 1705
Query 1591 AAGACAGAGTTCCAAACATCAAATTTAATGTGGCCAAAATGATGCAATCTCTCATTCCGA 1650
|||||||||||||||||||||| || || || |||||| | ||||||| ||||| || |
Sbjct 1706 AAGACAGAGTTCCAAACATCAAGTTCAACGTTGCCAAACTTCTGCAATCCCTCATCCCCA 1765
Query 1651 TAGTCGACCAAGCGGTTGTGGAGAACATGATACGGCCA-TGCTTGGTGGAGCTAAGTGAA 1709
||||||||||| | || ||||| || | || || | | || |||||||| || || |||
Sbjct 1766 TAGTCGACCAATCAGTGGTGGACAAAACAATCCGTC-AGTGTTTGGTGGACCTGAGCGAA 1824
Query 1710 GACCCGGACGTTGATGTTCGTT-TTTTCGCAAATCAAGC 1747
||||| || ||||||||||||| |||| |||||||||||
Sbjct 1825 GACCCTGATGTTGATGTTCGTTATTTT-GCAAATCAAGC 1862
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 89256569010
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5