BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg920333
Length=1735
Score E
Sequences producing significant alignments: (Bits) Value
AT1G14430.1 | Symbols: | glyoxal oxidase-related protein | chr... 2651 0.0
> AT1G14430.1 | Symbols: | glyoxal oxidase-related protein | chr1:4934120-4936100
FORWARD LENGTH=1981
Length=1981
Score = 2651 bits (1435), Expect = 0.0
Identities = 1632/1729 (94%), Gaps = 6/1729 (0%)
Strand=Plus/Plus
Query 1 AAGATTCTGAGCTGAAAATAATGAAGCAAGAAAGATTCAAGAAGAACCTAAACGCCGTCG 60
|||||||| ||||||||||||||| |||||||||||||||||| ||||| ||||||||||
Sbjct 220 AAGATTCTTAGCTGAAAATAATGACGCAAGAAAGATTCAAGAACAACCTTAACGCCGTCG 279
Query 61 T-ATTATCATTCTTCTTCTTCTTCCTCTGTTCCACGTCGGATTTGCTCCTCCCACGTTCA 119
| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 280 TGA-TATCATTCTTCTTCTTCTTCCTCTGTTCCACGTCGGATTTGCTCCTTCCACGTTCA 338
Query 120 CCGTTAGCTATTCTCACCGGCGGGAGGTGGGATCTCCTGCAGCCGAGTGTAGGTATATCC 179
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 339 CCGTTAGCTATTCTCACCGGCGGGAGGTGGGATCTTCTGCAGCCGAGTGTAGGTATATCC 398
Query 180 GCAATGCACATGCAGCTTCTACACAACAACAAAGTCGTCATCTTTGACCGTACGGATTAT 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 399 GCAATGCACATGCAGCTTCTACACAACAACAAAGTCGTCATCTTTGACCGTACGGATTAT 458
Query 240 GGACCTTCGAATCTTTCTCTACCTTCTCAAACCTGCCAAAACGGCACCGTTTTCGACTGC 299
|||||||||||| ||||||| |||||||||||||||||||||| ||||||||| ||||||
Sbjct 459 GGACCTTCGAATGTTTCTCTCCCTTCTCAAACCTGCCAAAACGCCACCGTTTTTGACTGC 518
Query 300 TCTGCTCATTCGATACTATACGACGTCGCTTCAAACACCTATCGTCCACTCACACTACGA 359
||||||||||| ||||||||||||||||||||||| |||| ||| ||||| ||||||||
Sbjct 519 TCTGCTCATTCAATACTATACGACGTCGCTTCAAATACCTTTCGCCCACTTACACTACGT 578
Query 360 TACGACACGTGGTGCTCCTCCGGTTCTTTAAACGCTTCCGGTTCTTTGATCCAAACCGGC 419
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 579 TACGACACGTGGTGCTCTTCCGGTTCTTTAAACGCTTCCGGTTCTTTAATCCAAACCGGC 638
Query 420 GGTTATGGCGCCGGCGAAAGAACTGTACGGATATTCACACCTTGCGACGGAGGAGTTGGA 479
||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct 639 GGTTATGGCAACGGCGAAAGAACTGTACGGGTTTTCACACCTTGCGACGGAGGAGTTGGA 698
Query 480 AGCGTTTCGTGTGATTGGGTTGAGAACAGAGCGTATCTCTCCTCTCGCCGGTGGTATTCC 539
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 699 AGCGTTTCGTGTGATTGGATTGAGAACAGAGCGTATCTCTCCTCTCGCCGGTGGTATTCC 758
Query 540 ACCAATCAGATTCTTCCCGATGGTCGAATTATCATCGTCGGCGGAAGAAGAGCTTTCACC 599
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
Sbjct 759 ACCAATCAGATTCTTCCCGATGGTCGGATTATCATCGTCGGCGGAAGAAGAGCTTTCAAC 818
Query 600 TACGAGTTTTACCCCAAGAATCCGGGAGAATCCGTTTTCAATCTCAGATTCTTGGCGGAG 659
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 819 TACGAGTTTTACCCCAAGGATCCGGGAGAATCCGTTTTCAATCTCAGATTCTTGGCGGAG 878
Query 660 ACGAGAGATCCGAATGAAGAAAACAATCTTTATCCGTTTCTTCATCTTCTCCCCGACGGA 719
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 879 ACGAGAGATCCGAATGAAGAAAACAATCTTTATCCGTTTCTTCATCTTCTCCCCGACGGT 938
Query 720 AACCTCTTCATCTTCGCCAATCGGAGATCAATTTTGTTCGATTTCGTCAATCATCGAATC 779
|| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 939 AATCTCTTCATCTTCGCCAATCGGAGATCGATTTTGTTCGATTTCGTCAATCACCGAATC 998
Query 780 ATCAAGGAGTTTCCGGTGATTCCCGGCGGTGATAAACGGAATTACCCCAGCACTGGCTCC 839
|||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||
Sbjct 999 ATCAAGGAGTTTCCACAGATTCCCGGCGGCGATAAACGGAATTATCCCAGCACTGGCTCC 1058
Query 840 TCCGTGCTCCTCCCTATTTTTCTCACCGGCGATAATAACCGATCTAAGATAA-TGGCTGA 898
||||||||||||||| | ||||||||||| || | |||| || | ||||||| || ||||
Sbjct 1059 TCCGTGCTCCTCCCTCTCTTTCTCACCGGAGACATTAACAGAACGAAGATAACTG-CTGA 1117
Query 899 GGTTATGGTATGCGGCGGTGCTCCGCCGGGAGCGTTCTTGAAAGCGGCGAGGACAATTCC 958
||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct 1118 GGTTATGGTATGCGGCGGTGCTCCGCCGGGAGCGTTCTTCAAAGCGGCGAGGACGATTCC 1177
Query 959 TAAAATCTTCGTCG-GAGCATCTCGCACGTGTGGGAGATTGAAAGTGACCGACCCGAATC 1017
|||||||||||||| | | ||| ||||||||||||||||||||||||||||||||| |||
Sbjct 1178 TAAAATCTTCGTCGCGGG-ATCACGCACGTGTGGGAGATTGAAAGTGACCGACCCGGATC 1236
Query 1018 CGAAATGGGTGATGGAGCAAATGCCATCGCCACGTGTGATGTCTGATATGTTACTGATAC 1077
|||||||||| |||||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct 1237 CGAAATGGGTCATGGAGCAAATGCCATCGCCACGTGTCATGTCTGATATGTTACTGTTAC 1296
Query 1078 CAAACGGTGACGTTTTGATCATTAACGGTGCTGCTAACGGAACCGCTGGCTGGGAAGACG 1137
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1297 CAAACGGTGACGTTTTGATCATTAACGGTGCTGCTAACGGAACCGCTGGTTGGGAAGACG 1356
Query 1138 CAACAAACGCTGTTCTCAACCCGATTTTATACTTACCCGACGAGCCTGACCCGACCCGAA 1197
| || ||||||||||||||||||||||||||||||||||| |||||||||| |||||| |
Sbjct 1357 CGACGAACGCTGTTCTCAACCCGATTTTATACTTACCCGAGGAGCCTGACCAGACCCGGA 1416
Query 1198 GATTCGAAATCCTCACCCCGACTCGAATCCCTAGAATGTACCATGCGGCGTCTCTCCTTC 1257
|||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct 1417 GATTCGAAATTCTCACCCCGACTCGAATCCCTAGAATGTACCATTCGGCGTCTCTTCTTC 1476
Query 1258 TTTCCGACGGTAGAGTTTTAGTCGGAGGAAGCAATCCTCATCGGAATTACAATTTCACGG 1317
| || ||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1477 TGTCAGACGGCAGAGTCTTAGTCGGAGGAAGCAATCCTCATCGAAATTACAATTTCACGG 1536
Query 1318 CGAGACCGTACCCGACGGAGCTCAGCCTCGAGGCTTATCTCCCGCGTTACCTAGATCCGC 1377
|||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 1537 CGAGGCCGTACCCAACGGAGCTCAGCCTCGAGGCTTATCTCCCGCGTTACCTGGATCCAC 1596
Query 1378 AGTACGCGCGCGTGAGGCCGACGATAATCACGGTGGAACTCGCCGGGAATATGTTGTACG 1437
||||||| || ||||| |||||||| ||||||||||| ||||||||||||||||||||||
Sbjct 1597 AGTACGCACGTGTGAGACCGACGATCATCACGGTGGAGCTCGCCGGGAATATGTTGTACG 1656
Query 1438 GTCAGGCTTTTGGCGTCACATTCGCGATTCCGGCGTTCGGTATGTTCGACGGAGGAGCGT 1497
|||||||||||| ||| || |||||||||||||| ||||| |||||||||||||| | |
Sbjct 1657 GTCAGGCTTTTGCCGTAACGTTCGCGATTCCGGCATTCGGAATGTTCGACGGAGGGGTAT 1716
Query 1498 CAGTGAGGCTAGTGGCGCCGTCGTTCAGCACTCACTCGACGGCGATGAACCAGAGGTTGT 1557
| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1717 CGGTGAGGCTCGTGGCGCCGTCGTTCAGCACTCACTCAACGGCGATGAACCAGAGGTTGT 1776
Query 1558 TGGTCCTGCGCGTGAGGCGCGTGAGTCAGTTATCTGTTTTCGCATATAAAGCTGACGTGG 1617
|||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1777 TGGTTTTGCGCGTCAGGCGCGTGAGTCAGTTATCTGTTTTCGCTTATAAAGCTGACGTGG 1836
Query 1618 AAGGGCCTACTAACTCCTACGTGGCACCGCCTGGGTATTATATGATGTTCGTGGTTCACC 1677
| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1837 ACGGGCCTACTAACTCCTACGTGGCACCACCTGGGTATTATATGATGTTCGTGGTTCACC 1896
Query 1678 GTGGAATTCCGAGTGTAGCTGTTTGGGTTAAGATTTAAAGCAATCCTTT 1726
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1897 GTGGAATTCCGAGTGTAGCTGTTTGGGTTAAGATTTAAAGCAATCCTTT 1945
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 85792731405
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5